RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
COL2A1-206ENST00000483376 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
COL2A1-206ENST00000483376 ZBTB7AO95365 584 aa21.29■■□□□ 1
COL2A1-206ENST00000483376 PTGER2P43116 358 aa21.29■■□□□ 1
COL2A1-206ENST00000483376 TRAPPC3LQ5T215 181 aa21.29■■□□□ 1
COL2A1-206ENST00000483376 MIS18AQ9NYP9 233 aa21.29■■□□□ 1
COL2A1-206ENST00000483376 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
COL2A1-206ENST00000483376 SOS1Q07889 1333 aaPredicted RBP21.29■■□□□ 1
COL2A1-206ENST00000483376 ZNF853P0CG23 659 aa21.28■■□□□ 1
COL2A1-206ENST00000483376 CFAP44Q96MT7 982 aa21.28■■□□□ 1
COL2A1-206ENST00000483376 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
COL2A1-206ENST00000483376 ZBTB1Q9Y2K1 713 aa21.27■■□□□ 1
COL2A1-206ENST00000483376 PHF14O94880 888 aa21.26■□□□□ 0.99
COL2A1-206ENST00000483376 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
COL2A1-206ENST00000483376 ARHGEF1Q92888 912 aaKnown RBP21.26■□□□□ 0.99
COL2A1-206ENST00000483376 IFT57Q9NWB7 429 aa21.26■□□□□ 0.99
COL2A1-206ENST00000483376 IL6STP40189 918 aaPredicted RBP21.25■□□□□ 0.99
COL2A1-206ENST00000483376 EIF5P55010 431 aaKnown RBP21.25■□□□□ 0.99
COL2A1-206ENST00000483376 WWC1Q8IX03 1113 aa21.25■□□□□ 0.99
COL2A1-206ENST00000483376 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
COL2A1-206ENST00000483376 LAMB4A4D0S4 1761 aa21.24■□□□□ 0.99
COL2A1-206ENST00000483376 ATF5Q9Y2D1 282 aaPredicted RBP21.24■□□□□ 0.99
COL2A1-206ENST00000483376 IL16Q14005 1332 aa21.24■□□□□ 0.99
COL2A1-206ENST00000483376 COL15A1P39059 1388 aa21.23■□□□□ 0.99
COL2A1-206ENST00000483376 MSH5O43196 834 aa21.23■□□□□ 0.99
COL2A1-206ENST00000483376 RFC4P35249 363 aa21.23■□□□□ 0.99
COL2A1-206ENST00000483376 GNAI1P63096 354 aa21.23■□□□□ 0.99
COL2A1-206ENST00000483376 C4AP0C0L4 1744 aa21.23■□□□□ 0.99
COL2A1-206ENST00000483376 PRAMEF22A3QJZ6 481 aa21.22■□□□□ 0.99
COL2A1-206ENST00000483376 HOXB7P09629 217 aa21.22■□□□□ 0.99
COL2A1-206ENST00000483376 POLD1P28340 1107 aa21.22■□□□□ 0.99
COL2A1-206ENST00000483376 SMIM5Q71RC9 77 aa21.22■□□□□ 0.99
COL2A1-206ENST00000483376 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
COL2A1-206ENST00000483376 USP42Q9H9J4 1324 aaKnown RBP21.22■□□□□ 0.99
COL2A1-206ENST00000483376 A0A087WZG4 1122 aa21.21■□□□□ 0.99
COL2A1-206ENST00000483376 NLGN1Q8N2Q7 840 aa21.21■□□□□ 0.99
COL2A1-206ENST00000483376 A1BGP04217 495 aa21.2■□□□□ 0.98
COL2A1-206ENST00000483376 GYS1P13807 737 aa21.2■□□□□ 0.98
COL2A1-206ENST00000483376 WDR63Q8IWG1 891 aa21.2■□□□□ 0.98
COL2A1-206ENST00000483376 NARFQ9UHQ1 456 aa21.2■□□□□ 0.98
COL2A1-206ENST00000483376 RGL2O15211 777 aa21.19■□□□□ 0.98
COL2A1-206ENST00000483376 CANXP27824 592 aaKnown RBP21.19■□□□□ 0.98
COL2A1-206ENST00000483376 MIER1Q8N108 512 aa21.19■□□□□ 0.98
COL2A1-206ENST00000483376 MBIPQ9NS73 344 aa21.19■□□□□ 0.98
COL2A1-206ENST00000483376 ARXQ96QS3 562 aa21.18■□□□□ 0.98
COL2A1-206ENST00000483376 LAS1LQ9Y4W2 734 aaKnown RBP21.17■□□□□ 0.98
COL2A1-206ENST00000483376 NBPF26B4DH59 902 aa21.16■□□□□ 0.98
COL2A1-206ENST00000483376 ZPR1O75312 459 aa21.16■□□□□ 0.98
COL2A1-206ENST00000483376 NBPF10Q6P3W6 841 aaKnown RBP21.16■□□□□ 0.98
COL2A1-206ENST00000483376 NBPF15Q8N660 670 aa21.16■□□□□ 0.98
COL2A1-206ENST00000483376 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
COL2A1-206ENST00000483376 ZNF521Q96K83 1311 aa21.15■□□□□ 0.98
COL2A1-206ENST00000483376 MSL1Q68DK7 614 aa21.15■□□□□ 0.98
COL2A1-206ENST00000483376 NPM2Q86SE8 214 aaKnown RBP21.14■□□□□ 0.97
COL2A1-206ENST00000483376 SRP68Q9UHB9 627 aaKnown RBP21.14■□□□□ 0.97
COL2A1-206ENST00000483376 SCN7AQ01118 1682 aa21.13■□□□□ 0.97
COL2A1-206ENST00000483376 USPL1Q5W0Q7 1092 aa21.12■□□□□ 0.97
COL2A1-206ENST00000483376 CHMP4AQ9BY43 222 aa21.12■□□□□ 0.97
COL2A1-206ENST00000483376 BCL2L12Q9HB09 334 aa21.12■□□□□ 0.97
COL2A1-206ENST00000483376 CAMTA2O94983 1202 aa21.11■□□□□ 0.97
COL2A1-206ENST00000483376 MMP10P09238 476 aa21.11■□□□□ 0.97
COL2A1-206ENST00000483376 TM4SF1P30408 202 aa21.11■□□□□ 0.97
COL2A1-206ENST00000483376 FKBP8Q14318 412 aa21.11■□□□□ 0.97
COL2A1-206ENST00000483376 PDIA6Q15084 440 aa21.11■□□□□ 0.97
COL2A1-206ENST00000483376 KRT24Q2M2I5 525 aa21.11■□□□□ 0.97
COL2A1-206ENST00000483376 LRP10Q7Z4F1 713 aa21.11■□□□□ 0.97
COL2A1-206ENST00000483376 DUSP27Q5VZP5 1158 aa21.1■□□□□ 0.97
COL2A1-206ENST00000483376 CLEC4GQ6UXB4 293 aa21.1■□□□□ 0.97
COL2A1-206ENST00000483376 DZIP3Q86Y13 1208 aaKnown RBP21.1■□□□□ 0.97
COL2A1-206ENST00000483376 FHDC1Q9C0D6 1143 aaPredicted RBP21.09■□□□□ 0.97
COL2A1-206ENST00000483376 DDX21Q9NR30 783 aaKnown RBP eCLIP21.09■□□□□ 0.97
COL2A1-206ENST00000483376 CD2APQ9Y5K6 639 aa21.09■□□□□ 0.97
COL2A1-206ENST00000483376 BCORQ6W2J9 1755 aa21.09■□□□□ 0.97
COL2A1-206ENST00000483376 PIP4K2AP48426 406 aaPredicted RBP21.08■□□□□ 0.97
COL2A1-206ENST00000483376 SYT17Q9BSW7 474 aa21.08■□□□□ 0.97
COL2A1-206ENST00000483376 TBC1D2BQ9UPU7 963 aa21.08■□□□□ 0.97
COL2A1-206ENST00000483376 FANCIQ9NVI1 1328 aa21.07■□□□□ 0.96
COL2A1-206ENST00000483376 ERVV-1B6SEH8 477 aa21.07■□□□□ 0.96
COL2A1-206ENST00000483376 EIF2S2P20042 333 aaKnown RBP21.07■□□□□ 0.96
COL2A1-206ENST00000483376 HDGFL1Q5TGJ6 251 aa21.07■□□□□ 0.96
COL2A1-206ENST00000483376 ZNF330Q9Y3S2 320 aaPredicted RBP21.07■□□□□ 0.96
COL2A1-206ENST00000483376 SALL2Q9Y467 1007 aaPredicted RBP21.07■□□□□ 0.96
COL2A1-206ENST00000483376 PARP3Q9Y6F1 533 aa21.07■□□□□ 0.96
COL2A1-206ENST00000483376 SENP3-EIF4A1A0A087X0R7 540 aa21.06■□□□□ 0.96
COL2A1-206ENST00000483376 POLRMTO00411 1230 aaKnown RBP21.06■□□□□ 0.96
COL2A1-206ENST00000483376 NFIXQ14938 502 aa21.06■□□□□ 0.96
COL2A1-206ENST00000483376 C8orf58Q8NAV2 365 aa21.06■□□□□ 0.96
COL2A1-206ENST00000483376 TSR2Q969E8 191 aaKnown RBP21.06■□□□□ 0.96
COL2A1-206ENST00000483376 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
COL2A1-206ENST00000483376 DBF4Q9UBU7 674 aaPredicted RBP21.06■□□□□ 0.96
COL2A1-206ENST00000483376 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
COL2A1-206ENST00000483376 C10orf71Q711Q0 1435 aa21.05■□□□□ 0.96
COL2A1-206ENST00000483376 DDR1Q08345 913 aa21.05■□□□□ 0.96
COL2A1-206ENST00000483376 MAP3K15Q6ZN16 1313 aa21.04■□□□□ 0.96
COL2A1-206ENST00000483376 NRXN2Q9P2S2 1712 aa21.04■□□□□ 0.96
COL2A1-206ENST00000483376 GOLGA2Q08379 1002 aa21.04■□□□□ 0.96
COL2A1-206ENST00000483376 KIF13BQ9NQT8 1826 aa21.04■□□□□ 0.96
COL2A1-206ENST00000483376 MYL6BP14649 208 aa21.03■□□□□ 0.96
COL2A1-206ENST00000483376 SPINK5Q9NQ38 1064 aaPredicted RBP21.03■□□□□ 0.96
COL2A1-206ENST00000483376 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms