RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SSFA2P28290 1259 aa11.51□□□□□ -0.57
SNX4-205ENST00000482965 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
SNX4-205ENST00000482965 SMIM5Q71RC9 77 aa11.51□□□□□ -0.57
SNX4-205ENST00000482965 MIS18AQ9NYP9 233 aa11.51□□□□□ -0.57
SNX4-205ENST00000482965 RTCBQ9Y3I0 505 aaKnown RBP11.51□□□□□ -0.57
SNX4-205ENST00000482965 RPS6KA4O75676 772 aa11.5□□□□□ -0.57
SNX4-205ENST00000482965 AMIGO3Q86WK7 504 aa11.5□□□□□ -0.57
SNX4-205ENST00000482965 TEX13AQ9BXU3 409 aaPredicted RBP11.5□□□□□ -0.57
SNX4-205ENST00000482965 CCDC87Q9NVE4 849 aa11.5□□□□□ -0.57
SNX4-205ENST00000482965 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
SNX4-205ENST00000482965 STARD3NLO95772 234 aa11.49□□□□□ -0.57
SNX4-205ENST00000482965 CYP19A1P11511 503 aaPredicted RBP11.49□□□□□ -0.57
SNX4-205ENST00000482965 TRAPPC3LQ5T215 181 aa11.49□□□□□ -0.57
SNX4-205ENST00000482965 DIEXFQ68CQ4 756 aaKnown RBP11.49□□□□□ -0.57
SNX4-205ENST00000482965 FAM9BQ8IZU0 186 aa11.49□□□□□ -0.57
SNX4-205ENST00000482965 PPP1R1BQ9UD71 204 aaPredicted RBP11.49□□□□□ -0.57
SNX4-205ENST00000482965 TSPYL4Q9UJ04 414 aa11.49□□□□□ -0.57
SNX4-205ENST00000482965 C4AP0C0L4 1744 aa11.49□□□□□ -0.57
SNX4-205ENST00000482965 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
SNX4-205ENST00000482965 MSL1Q68DK7 614 aa11.48□□□□□ -0.57
SNX4-205ENST00000482965 INTS5Q6P9B9 1019 aaKnown RBP11.48□□□□□ -0.57
SNX4-205ENST00000482965 COL24A1Q17RW2 1714 aa11.48□□□□□ -0.57
SNX4-205ENST00000482965 LAMB4A4D0S4 1761 aa11.48□□□□□ -0.57
SNX4-205ENST00000482965 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
SNX4-205ENST00000482965 POLD1P28340 1107 aa11.47□□□□□ -0.57
SNX4-205ENST00000482965 RFC4P35249 363 aa11.47□□□□□ -0.57
SNX4-205ENST00000482965 PTGER2P43116 358 aa11.47□□□□□ -0.57
SNX4-205ENST00000482965 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
SNX4-205ENST00000482965 BABAM1Q9NWV8 329 aa11.47□□□□□ -0.57
SNX4-205ENST00000482965 ZBTB1Q9Y2K1 713 aa11.47□□□□□ -0.57
SNX4-205ENST00000482965 LAS1LQ9Y4W2 734 aaKnown RBP11.47□□□□□ -0.57
SNX4-205ENST00000482965 SOS1Q07889 1333 aaPredicted RBP11.46□□□□□ -0.57
SNX4-205ENST00000482965 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
SNX4-205ENST00000482965 EIF4A1P60842 406 aaKnown RBP11.46□□□□□ -0.57
SNX4-205ENST00000482965 CALD1Q05682 793 aaKnown RBP11.46□□□□□ -0.57
SNX4-205ENST00000482965 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
SNX4-205ENST00000482965 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
SNX4-205ENST00000482965 COL15A1P39059 1388 aa11.45□□□□□ -0.58
SNX4-205ENST00000482965 PRAMEF22A3QJZ6 481 aa11.45□□□□□ -0.58
SNX4-205ENST00000482965 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
SNX4-205ENST00000482965 SGIP1Q9BQI5 828 aa11.45□□□□□ -0.58
SNX4-205ENST00000482965 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
SNX4-205ENST00000482965 CHL1O00533 1208 aa11.44□□□□□ -0.58
SNX4-205ENST00000482965 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
SNX4-205ENST00000482965 A1BGP04217 495 aa11.44□□□□□ -0.58
SNX4-205ENST00000482965 CACNB1Q02641 598 aaPredicted RBP11.44□□□□□ -0.58
SNX4-205ENST00000482965 NPM2Q86SE8 214 aaKnown RBP11.44□□□□□ -0.58
SNX4-205ENST00000482965 ARXQ96QS3 562 aa11.44□□□□□ -0.58
SNX4-205ENST00000482965 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
SNX4-205ENST00000482965 USP42Q9H9J4 1324 aaKnown RBP11.43□□□□□ -0.58
SNX4-205ENST00000482965 A0A087WZG4 1122 aa11.43□□□□□ -0.58
SNX4-205ENST00000482965 ZPR1O75312 459 aa11.43□□□□□ -0.58
SNX4-205ENST00000482965 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
SNX4-205ENST00000482965 CFAP44Q96MT7 982 aa11.43□□□□□ -0.58
SNX4-205ENST00000482965 IFT57Q9NWB7 429 aa11.43□□□□□ -0.58
SNX4-205ENST00000482965 SRP68Q9UHB9 627 aaKnown RBP11.43□□□□□ -0.58
SNX4-205ENST00000482965 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
SNX4-205ENST00000482965 GYS1P13807 737 aa11.42□□□□□ -0.58
SNX4-205ENST00000482965 IL6STP40189 918 aaPredicted RBP11.42□□□□□ -0.58
SNX4-205ENST00000482965 PIP4K2AP48426 406 aaPredicted RBP11.42□□□□□ -0.58
SNX4-205ENST00000482965 EIF5P55010 431 aaKnown RBP11.42□□□□□ -0.58
SNX4-205ENST00000482965 GNAI1P63096 354 aa11.42□□□□□ -0.58
SNX4-205ENST00000482965 WWC1Q8IX03 1113 aa11.42□□□□□ -0.58
SNX4-205ENST00000482965 KLHL34Q8N239 644 aa11.42□□□□□ -0.58
SNX4-205ENST00000482965 NLGN1Q8N2Q7 840 aa11.42□□□□□ -0.58
SNX4-205ENST00000482965 ZNF853P0CG23 659 aa11.41□□□□□ -0.58
SNX4-205ENST00000482965 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
SNX4-205ENST00000482965 MIER1Q8N108 512 aa11.41□□□□□ -0.58
SNX4-205ENST00000482965 MBIPQ9NS73 344 aa11.41□□□□□ -0.58
SNX4-205ENST00000482965 NARFQ9UHQ1 456 aa11.41□□□□□ -0.58
SNX4-205ENST00000482965 SCN7AQ01118 1682 aa11.4□□□□□ -0.58
SNX4-205ENST00000482965 MMP10P09238 476 aa11.4□□□□□ -0.58
SNX4-205ENST00000482965 EIF2S2P20042 333 aaKnown RBP11.4□□□□□ -0.58
SNX4-205ENST00000482965 FKBP8Q14318 412 aa11.4□□□□□ -0.58
SNX4-205ENST00000482965 KRT24Q2M2I5 525 aa11.4□□□□□ -0.58
SNX4-205ENST00000482965 FHDC1Q9C0D6 1143 aaPredicted RBP11.4□□□□□ -0.58
SNX4-205ENST00000482965 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
SNX4-205ENST00000482965 BCORQ6W2J9 1755 aa11.39□□□□□ -0.59
SNX4-205ENST00000482965 NBPF26B4DH59 902 aa11.39□□□□□ -0.59
SNX4-205ENST00000482965 NBPF10Q6P3W6 841 aaKnown RBP11.39□□□□□ -0.59
SNX4-205ENST00000482965 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
SNX4-205ENST00000482965 NGEFQ8N5V2 710 aa11.39□□□□□ -0.59
SNX4-205ENST00000482965 NBPF15Q8N660 670 aa11.39□□□□□ -0.59
SNX4-205ENST00000482965 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
SNX4-205ENST00000482965 IL16Q14005 1332 aa11.38□□□□□ -0.59
SNX4-205ENST00000482965 ERBB4Q15303 1308 aa11.38□□□□□ -0.59
SNX4-205ENST00000482965 MYL6BP14649 208 aa11.38□□□□□ -0.59
SNX4-205ENST00000482965 WDR63Q8IWG1 891 aa11.38□□□□□ -0.59
SNX4-205ENST00000482965 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
SNX4-205ENST00000482965 SYT17Q9BSW7 474 aa11.38□□□□□ -0.59
SNX4-205ENST00000482965 CAPN15O75808 1086 aa11.37□□□□□ -0.59
SNX4-205ENST00000482965 HOXB7P09629 217 aa11.37□□□□□ -0.59
SNX4-205ENST00000482965 DUSP27Q5VZP5 1158 aa11.37□□□□□ -0.59
SNX4-205ENST00000482965 TSR2Q969E8 191 aaKnown RBP11.37□□□□□ -0.59
SNX4-205ENST00000482965 BCL2L12Q9HB09 334 aa11.37□□□□□ -0.59
SNX4-205ENST00000482965 AFDNP55196 1824 aaKnown RBP11.37□□□□□ -0.59
SNX4-205ENST00000482965 CAMTA2O94983 1202 aa11.36□□□□□ -0.59
SNX4-205ENST00000482965 DDR1Q08345 913 aa11.36□□□□□ -0.59
SNX4-205ENST00000482965 NFIXQ14938 502 aa11.36□□□□□ -0.59
SNX4-205ENST00000482965 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms