RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 SNRPA1P09661 255 aaKnown RBP24.13■■□□□ 1.45
SMIM4-204ENST00000482728 UBR2Q8IWV8 1755 aa24.12■■□□□ 1.45
SMIM4-204ENST00000482728 CANXP27824 592 aaKnown RBP24.12■■□□□ 1.45
SMIM4-204ENST00000482728 APAF1O14727 1248 aa24.11■■□□□ 1.45
SMIM4-204ENST00000482728 KLHL34Q8N239 644 aa24.11■■□□□ 1.45
SMIM4-204ENST00000482728 NLGN1Q8N2Q7 840 aa24.11■■□□□ 1.45
SMIM4-204ENST00000482728 FHDC1Q9C0D6 1143 aaPredicted RBP24.11■■□□□ 1.45
SMIM4-204ENST00000482728 ZBTB1Q9Y2K1 713 aa24.1■■□□□ 1.45
SMIM4-204ENST00000482728 CICQ96RK0 1608 aaPredicted RBP24.1■■□□□ 1.45
SMIM4-204ENST00000482728 ZPR1O75312 459 aa24.09■■□□□ 1.45
SMIM4-204ENST00000482728 NPM2Q86SE8 214 aaKnown RBP24.09■■□□□ 1.45
SMIM4-204ENST00000482728 SYT17Q9BSW7 474 aa24.09■■□□□ 1.45
SMIM4-204ENST00000482728 SOS1Q07889 1333 aaPredicted RBP24.09■■□□□ 1.45
SMIM4-204ENST00000482728 TSPYL4Q9UJ04 414 aa24.08■■□□□ 1.45
SMIM4-204ENST00000482728 TRIM35Q9UPQ4 493 aa24.08■■□□□ 1.45
SMIM4-204ENST00000482728 USP16Q9Y5T5 823 aa24.08■■□□□ 1.45
SMIM4-204ENST00000482728 DCAF8L1A6NGE4 600 aa24.07■■□□□ 1.44
SMIM4-204ENST00000482728 BABAM1Q9NWV8 329 aa24.07■■□□□ 1.44
SMIM4-204ENST00000482728 A1BGP04217 495 aa24.06■■□□□ 1.44
SMIM4-204ENST00000482728 GYS1P13807 737 aa24.06■■□□□ 1.44
SMIM4-204ENST00000482728 SRP68Q9UHB9 627 aaKnown RBP24.06■■□□□ 1.44
SMIM4-204ENST00000482728 ZNF330Q9Y3S2 320 aaPredicted RBP24.06■■□□□ 1.44
SMIM4-204ENST00000482728 A0A087WZG4 1122 aa24.05■■□□□ 1.44
SMIM4-204ENST00000482728 EIF4A1P60842 406 aaKnown RBP24.05■■□□□ 1.44
SMIM4-204ENST00000482728 LAS1LQ9Y4W2 734 aaKnown RBP24.05■■□□□ 1.44
SMIM4-204ENST00000482728 PRAMEF22A3QJZ6 481 aa24.04■■□□□ 1.44
SMIM4-204ENST00000482728 MMP10P09238 476 aa24.04■■□□□ 1.44
SMIM4-204ENST00000482728 EIF5P55010 431 aaKnown RBP24.04■■□□□ 1.44
SMIM4-204ENST00000482728 USP42Q9H9J4 1324 aaKnown RBP24.04■■□□□ 1.44
SMIM4-204ENST00000482728 COL24A1Q17RW2 1714 aa24.04■■□□□ 1.44
SMIM4-204ENST00000482728 IL6STP40189 918 aaPredicted RBP24.03■■□□□ 1.44
SMIM4-204ENST00000482728 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
SMIM4-204ENST00000482728 COL15A1P39059 1388 aa24.03■■□□□ 1.44
SMIM4-204ENST00000482728 GIGYF1O75420 1035 aaPredicted RBP24.02■■□□□ 1.44
SMIM4-204ENST00000482728 CALD1Q05682 793 aaKnown RBP24.01■■□□□ 1.43
SMIM4-204ENST00000482728 USPL1Q5W0Q7 1092 aa24.01■■□□□ 1.43
SMIM4-204ENST00000482728 CHL1O00533 1208 aa24■■□□□ 1.43
SMIM4-204ENST00000482728 FKBP8Q14318 412 aa24■■□□□ 1.43
SMIM4-204ENST00000482728 FAM9BQ8IZU0 186 aa24■■□□□ 1.43
SMIM4-204ENST00000482728 CD2APQ9Y5K6 639 aa24■■□□□ 1.43
SMIM4-204ENST00000482728 PARP3Q9Y6F1 533 aa24■■□□□ 1.43
SMIM4-204ENST00000482728 PIP4K2AP48426 406 aaPredicted RBP23.98■■□□□ 1.43
SMIM4-204ENST00000482728 TBC1D2BQ9UPU7 963 aa23.98■■□□□ 1.43
SMIM4-204ENST00000482728 KDM3BQ7LBC6 1761 aa23.98■■□□□ 1.43
SMIM4-204ENST00000482728 CFAP44Q96MT7 982 aa23.97■■□□□ 1.43
SMIM4-204ENST00000482728 C4AP0C0L4 1744 aa23.96■■□□□ 1.43
SMIM4-204ENST00000482728 SENP3-EIF4A1A0A087X0R7 540 aa23.95■■□□□ 1.42
SMIM4-204ENST00000482728 NBPF26B4DH59 902 aa23.95■■□□□ 1.42
SMIM4-204ENST00000482728 NBPF10Q6P3W6 841 aaKnown RBP23.95■■□□□ 1.42
SMIM4-204ENST00000482728 NBPF15Q8N660 670 aa23.95■■□□□ 1.42
SMIM4-204ENST00000482728 GNAI1P63096 354 aa23.94■■□□□ 1.42
SMIM4-204ENST00000482728 DZIP3Q86Y13 1208 aaKnown RBP23.94■■□□□ 1.42
SMIM4-204ENST00000482728 NLGN2Q8NFZ4 835 aa23.94■■□□□ 1.42
SMIM4-204ENST00000482728 EIF2S2P20042 333 aaKnown RBP23.93■■□□□ 1.42
SMIM4-204ENST00000482728 TM4SF1P30408 202 aa23.93■■□□□ 1.42
SMIM4-204ENST00000482728 IFT57Q9NWB7 429 aa23.93■■□□□ 1.42
SMIM4-204ENST00000482728 CCDC27Q2M243 656 aa23.92■■□□□ 1.42
SMIM4-204ENST00000482728 BCL2L12Q9HB09 334 aa23.92■■□□□ 1.42
SMIM4-204ENST00000482728 DDR1Q08345 913 aa23.91■■□□□ 1.42
SMIM4-204ENST00000482728 NFIXQ14938 502 aa23.91■■□□□ 1.42
SMIM4-204ENST00000482728 GPR162Q16538 588 aa23.91■■□□□ 1.42
SMIM4-204ENST00000482728 BICDL1Q6ZP65 573 aa23.91■■□□□ 1.42
SMIM4-204ENST00000482728 PELP1Q8IZL8 1130 aaKnown RBP23.91■■□□□ 1.42
SMIM4-204ENST00000482728 NGEFQ8N5V2 710 aa23.91■■□□□ 1.42
SMIM4-204ENST00000482728 NCBP3Q53F19 620 aaKnown RBP23.9■■□□□ 1.42
SMIM4-204ENST00000482728 WWC1Q8IX03 1113 aa23.9■■□□□ 1.42
SMIM4-204ENST00000482728 MBIPQ9NS73 344 aa23.9■■□□□ 1.42
SMIM4-204ENST00000482728 SALL2Q9Y467 1007 aaPredicted RBP23.9■■□□□ 1.42
SMIM4-204ENST00000482728 CAMTA2O94983 1202 aa23.89■■□□□ 1.41
SMIM4-204ENST00000482728 ZNF853P0CG23 659 aa23.89■■□□□ 1.41
SMIM4-204ENST00000482728 MYL6BP14649 208 aa23.89■■□□□ 1.41
SMIM4-204ENST00000482728 ERBB4Q15303 1308 aa23.88■■□□□ 1.41
SMIM4-204ENST00000482728 POLRMTO00411 1230 aaKnown RBP23.88■■□□□ 1.41
SMIM4-204ENST00000482728 ZNF652Q9Y2D9 606 aa23.88■■□□□ 1.41
SMIM4-204ENST00000482728 KRT24Q2M2I5 525 aa23.87■■□□□ 1.41
SMIM4-204ENST00000482728 TBC1D9BQ66K14 1250 aa23.87■■□□□ 1.41
SMIM4-204ENST00000482728 DIEXFQ68CQ4 756 aaKnown RBP23.87■■□□□ 1.41
SMIM4-204ENST00000482728 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
SMIM4-204ENST00000482728 CCER2I3L3R5 266 aa23.86■■□□□ 1.41
SMIM4-204ENST00000482728 SERPINB2P05120 415 aa23.86■■□□□ 1.41
SMIM4-204ENST00000482728 TGFB2P61812 414 aa23.86■■□□□ 1.41
SMIM4-204ENST00000482728 CLEC4GQ6UXB4 293 aa23.86■■□□□ 1.41
SMIM4-204ENST00000482728 SETDB2Q96T68 719 aa23.86■■□□□ 1.41
SMIM4-204ENST00000482728 LAMB4A4D0S4 1761 aa23.86■■□□□ 1.41
SMIM4-204ENST00000482728 DUSP27Q5VZP5 1158 aa23.85■■□□□ 1.41
SMIM4-204ENST00000482728 KIF6Q6ZMV9 814 aa23.85■■□□□ 1.41
SMIM4-204ENST00000482728 HOXB7P09629 217 aa23.84■■□□□ 1.41
SMIM4-204ENST00000482728 HDGFL1Q5TGJ6 251 aa23.83■■□□□ 1.41
SMIM4-204ENST00000482728 A0A0G2JLW4 131 aa23.82■■□□□ 1.4
SMIM4-204ENST00000482728 RGL2O15211 777 aa23.82■■□□□ 1.4
SMIM4-204ENST00000482728 NPHP1O15259 732 aa23.82■■□□□ 1.4
SMIM4-204ENST00000482728 IL16Q14005 1332 aa23.82■■□□□ 1.4
SMIM4-204ENST00000482728 ERVV-1B6SEH8 477 aa23.81■■□□□ 1.4
SMIM4-204ENST00000482728 ELL2O00472 640 aaPredicted RBP23.81■■□□□ 1.4
SMIM4-204ENST00000482728 PDIA6Q15084 440 aa23.81■■□□□ 1.4
SMIM4-204ENST00000482728 TTLL7Q6ZT98 887 aa23.81■■□□□ 1.4
SMIM4-204ENST00000482728 WDR63Q8IWG1 891 aa23.81■■□□□ 1.4
SMIM4-204ENST00000482728 DDX21Q9NR30 783 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMIM4-204ENST00000482728 C10orf71Q711Q0 1435 aa23.81■■□□□ 1.4
SMIM4-204ENST00000482728 ANXA1P04083 346 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms