RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 CASZ1Q86V15 1759 aa22.69■■□□□ 1.22
DDR1-243ENST00000482050 TEX13AQ9BXU3 409 aaPredicted RBP22.69■■□□□ 1.22
DDR1-243ENST00000482050 MBIPQ9NS73 344 aa22.69■■□□□ 1.22
DDR1-243ENST00000482050 ZBTB1Q9Y2K1 713 aa22.69■■□□□ 1.22
DDR1-243ENST00000482050 UBR3Q6ZT12 1888 aa22.68■■□□□ 1.22
DDR1-243ENST00000482050 RPS6KA4O75676 772 aa22.68■■□□□ 1.22
DDR1-243ENST00000482050 CANXP27824 592 aaKnown RBP22.68■■□□□ 1.22
DDR1-243ENST00000482050 GNAI1P63096 354 aa22.68■■□□□ 1.22
DDR1-243ENST00000482050 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
DDR1-243ENST00000482050 IFT57Q9NWB7 429 aa22.68■■□□□ 1.22
DDR1-243ENST00000482050 GIGYF1O75420 1035 aaPredicted RBP22.67■■□□□ 1.22
DDR1-243ENST00000482050 A1BGP04217 495 aa22.67■■□□□ 1.22
DDR1-243ENST00000482050 ZNF853P0CG23 659 aa22.67■■□□□ 1.22
DDR1-243ENST00000482050 SSFA2P28290 1259 aa22.67■■□□□ 1.22
DDR1-243ENST00000482050 NCBP3Q53F19 620 aaKnown RBP22.67■■□□□ 1.22
DDR1-243ENST00000482050 QSER1Q2KHR3 1735 aa22.67■■□□□ 1.22
DDR1-243ENST00000482050 PIP4K2AP48426 406 aaPredicted RBP22.66■■□□□ 1.22
DDR1-243ENST00000482050 FLAD1Q8NFF5 587 aa22.66■■□□□ 1.22
DDR1-243ENST00000482050 ATF5Q9Y2D1 282 aaPredicted RBP22.66■■□□□ 1.22
DDR1-243ENST00000482050 TRAPPC3LQ5T215 181 aa22.65■■□□□ 1.22
DDR1-243ENST00000482050 TSR2Q969E8 191 aaKnown RBP22.65■■□□□ 1.22
DDR1-243ENST00000482050 ZNF330Q9Y3S2 320 aaPredicted RBP22.65■■□□□ 1.22
DDR1-243ENST00000482050 SOS1Q07889 1333 aaPredicted RBP22.63■■□□□ 1.21
DDR1-243ENST00000482050 MSL1Q68DK7 614 aa22.63■■□□□ 1.21
DDR1-243ENST00000482050 NGEFQ8N5V2 710 aa22.63■■□□□ 1.21
DDR1-243ENST00000482050 ARHGEF1Q92888 912 aaKnown RBP22.63■■□□□ 1.21
DDR1-243ENST00000482050 EIF2S2P20042 333 aaKnown RBP22.62■■□□□ 1.21
DDR1-243ENST00000482050 WDR63Q8IWG1 891 aa22.62■■□□□ 1.21
DDR1-243ENST00000482050 MTFR1LQ9H019 292 aa22.62■■□□□ 1.21
DDR1-243ENST00000482050 IL16Q14005 1332 aa22.61■■□□□ 1.21
DDR1-243ENST00000482050 RFC4P35249 363 aa22.61■■□□□ 1.21
DDR1-243ENST00000482050 NECTIN2Q92692 538 aa22.61■■□□□ 1.21
DDR1-243ENST00000482050 ELL2O00472 640 aaPredicted RBP22.6■■□□□ 1.21
DDR1-243ENST00000482050 ADRA2BP18089 450 aa22.6■■□□□ 1.21
DDR1-243ENST00000482050 SLC16A10Q8TF71 515 aa22.6■■□□□ 1.21
DDR1-243ENST00000482050 SPON1Q9HCB6 807 aa22.6■■□□□ 1.21
DDR1-243ENST00000482050 SPINK5Q9NQ38 1064 aaPredicted RBP22.6■■□□□ 1.21
DDR1-243ENST00000482050 SRP68Q9UHB9 627 aaKnown RBP22.6■■□□□ 1.21
DDR1-243ENST00000482050 LAMB4A4D0S4 1761 aa22.6■■□□□ 1.21
DDR1-243ENST00000482050 COL15A1P39059 1388 aa22.6■■□□□ 1.21
DDR1-243ENST00000482050 ZNF521Q96K83 1311 aa22.58■■□□□ 1.21
DDR1-243ENST00000482050 NBPF26B4DH59 902 aa22.58■■□□□ 1.21
DDR1-243ENST00000482050 EIF5P55010 431 aaKnown RBP22.58■■□□□ 1.21
DDR1-243ENST00000482050 DUSP27Q5VZP5 1158 aa22.58■■□□□ 1.21
DDR1-243ENST00000482050 NBPF10Q6P3W6 841 aaKnown RBP22.58■■□□□ 1.21
DDR1-243ENST00000482050 NBPF15Q8N660 670 aa22.58■■□□□ 1.21
DDR1-243ENST00000482050 ARXQ96QS3 562 aa22.58■■□□□ 1.21
DDR1-243ENST00000482050 C8orf58Q8NAV2 365 aa22.57■■□□□ 1.2
DDR1-243ENST00000482050 C4AP0C0L4 1744 aa22.57■■□□□ 1.2
DDR1-243ENST00000482050 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
DDR1-243ENST00000482050 MYL6BP14649 208 aa22.56■■□□□ 1.2
DDR1-243ENST00000482050 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
DDR1-243ENST00000482050 NPM2Q86SE8 214 aaKnown RBP22.56■■□□□ 1.2
DDR1-243ENST00000482050 PTGER2P43116 358 aa22.55■■□□□ 1.2
DDR1-243ENST00000482050 HNRNPUQ00839 825 aaKnown RBP eCLIP22.55■■□□□ 1.2
DDR1-243ENST00000482050 TBC1D2BQ9UPU7 963 aa22.55■■□□□ 1.2
DDR1-243ENST00000482050 USP42Q9H9J4 1324 aaKnown RBP22.55■■□□□ 1.2
DDR1-243ENST00000482050 ZPR1O75312 459 aa22.54■■□□□ 1.2
DDR1-243ENST00000482050 ANXA1P04083 346 aa22.54■■□□□ 1.2
DDR1-243ENST00000482050 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
DDR1-243ENST00000482050 USPL1Q5W0Q7 1092 aa22.54■■□□□ 1.2
DDR1-243ENST00000482050 TSPYL6Q8N831 410 aa22.54■■□□□ 1.2
DDR1-243ENST00000482050 GYS1P13807 737 aa22.53■■□□□ 1.2
DDR1-243ENST00000482050 GOLGA2Q08379 1002 aa22.53■■□□□ 1.2
DDR1-243ENST00000482050 MYH16Q9H6N6 1097 aa22.53■■□□□ 1.2
DDR1-243ENST00000482050 A0A087WZG4 1122 aa22.52■■□□□ 1.2
DDR1-243ENST00000482050 HOXB7P09629 217 aa22.52■■□□□ 1.2
DDR1-243ENST00000482050 PROSER3Q2NL68 480 aa22.52■■□□□ 1.2
DDR1-243ENST00000482050 NARFQ9UHQ1 456 aa22.52■■□□□ 1.2
DDR1-243ENST00000482050 LRP5O75197 1615 aa22.52■■□□□ 1.2
DDR1-243ENST00000482050 POLD1P28340 1107 aa22.51■■□□□ 1.19
DDR1-243ENST00000482050 FKBP8Q14318 412 aa22.51■■□□□ 1.19
DDR1-243ENST00000482050 DZIP3Q86Y13 1208 aaKnown RBP22.51■■□□□ 1.19
DDR1-243ENST00000482050 CDCA7LQ96GN5 454 aa22.51■■□□□ 1.19
DDR1-243ENST00000482050 SGIP1Q9BQI5 828 aa22.51■■□□□ 1.19
DDR1-243ENST00000482050 CHPF2Q9P2E5 772 aa22.51■■□□□ 1.19
DDR1-243ENST00000482050 PPP1R1BQ9UD71 204 aaPredicted RBP22.51■■□□□ 1.19
DDR1-243ENST00000482050 EXOSC9Q06265 439 aaKnown RBP22.5■■□□□ 1.19
DDR1-243ENST00000482050 PDIA6Q15084 440 aa22.5■■□□□ 1.19
DDR1-243ENST00000482050 ERBB4Q15303 1308 aa22.5■■□□□ 1.19
DDR1-243ENST00000482050 TWISTNBQ3B726 338 aaPredicted RBP22.49■■□□□ 1.19
DDR1-243ENST00000482050 NLGN1Q8N2Q7 840 aa22.49■■□□□ 1.19
DDR1-243ENST00000482050 BCL2L12Q9HB09 334 aa22.49■■□□□ 1.19
DDR1-243ENST00000482050 E9PSI1 815 aa22.47■■□□□ 1.19
DDR1-243ENST00000482050 TCERG1O14776 1098 aaKnown RBP22.47■■□□□ 1.19
DDR1-243ENST00000482050 CAMTA2O94983 1202 aa22.47■■□□□ 1.19
DDR1-243ENST00000482050 MMP10P09238 476 aa22.47■■□□□ 1.19
DDR1-243ENST00000482050 TTLL7Q6ZT98 887 aa22.47■■□□□ 1.19
DDR1-243ENST00000482050 SLFN5Q08AF3 891 aa22.46■■□□□ 1.19
DDR1-243ENST00000482050 DDX21Q9NR30 783 aaKnown RBP eCLIP22.46■■□□□ 1.19
DDR1-243ENST00000482050 COL24A1Q17RW2 1714 aa22.45■■□□□ 1.19
DDR1-243ENST00000482050 AIMP1Q12904 312 aaKnown RBP22.45■■□□□ 1.18
DDR1-243ENST00000482050 BICDL1Q6ZP65 573 aa22.45■■□□□ 1.18
DDR1-243ENST00000482050 LRP10Q7Z4F1 713 aa22.45■■□□□ 1.18
DDR1-243ENST00000482050 KLHL34Q8N239 644 aa22.45■■□□□ 1.18
DDR1-243ENST00000482050 DBF4Q9UBU7 674 aaPredicted RBP22.45■■□□□ 1.18
DDR1-243ENST00000482050 SCN7AQ01118 1682 aa22.44■■□□□ 1.18
DDR1-243ENST00000482050 CCDC30Q5VVM6 783 aa22.44■■□□□ 1.18
DDR1-243ENST00000482050 KIF6Q6ZMV9 814 aa22.44■■□□□ 1.18
DDR1-243ENST00000482050 XAGE3Q8WTP9 111 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms