RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TEAD4Q15561 434 aa10.15□□□□□ -0.78
CALD1-219ENST00000480638 PARP3Q9Y6F1 533 aa10.15□□□□□ -0.78
CALD1-219ENST00000480638 SCG3Q8WXD2 468 aaKnown RBP10.14□□□□□ -0.79
CALD1-219ENST00000480638 GAS2L1Q99501 681 aaPredicted RBP10.14□□□□□ -0.79
CALD1-219ENST00000480638 PPP1R12BO60237 982 aaPredicted RBP10.13□□□□□ -0.79
CALD1-219ENST00000480638 F11P03951 625 aa10.13□□□□□ -0.79
CALD1-219ENST00000480638 IGFBP4P22692 258 aa10.13□□□□□ -0.79
CALD1-219ENST00000480638 NOS2P35228 1153 aa10.13□□□□□ -0.79
CALD1-219ENST00000480638 NFX1Q12986 1120 aaKnown RBP10.13□□□□□ -0.79
CALD1-219ENST00000480638 POTEAQ6S8J7 498 aa10.13□□□□□ -0.79
CALD1-219ENST00000480638 L3MBTL2Q969R5 705 aa10.13□□□□□ -0.79
CALD1-219ENST00000480638 ATAD2Q6PL18 1390 aa10.13□□□□□ -0.79
CALD1-219ENST00000480638 SERTM1A2A2V5 107 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 EML1O00423 815 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 ATP4AP20648 1035 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 MSX1P28360 303 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 WEE1P30291 646 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 SH3PXD2AQ5TCZ1 1133 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 GAS2L2Q8NHY3 880 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 GPAMQ9HCL2 828 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 CUEDC1Q9NWM3 386 aaPredicted RBP10.12□□□□□ -0.79
CALD1-219ENST00000480638 ZNF232Q9UNY5 417 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 CHMP3Q9Y3E7 222 aa10.12□□□□□ -0.79
CALD1-219ENST00000480638 TMEM88BA6NKF7 163 aa10.11□□□□□ -0.79
CALD1-219ENST00000480638 CSB-PGBD3P0DP91 1061 aa10.11□□□□□ -0.79
CALD1-219ENST00000480638 TXLNAP40222 546 aa10.11□□□□□ -0.79
CALD1-219ENST00000480638 HIRAP54198 1017 aaPredicted RBP10.11□□□□□ -0.79
CALD1-219ENST00000480638 RIPOR1Q6ZS17 1223 aa10.11□□□□□ -0.79
CALD1-219ENST00000480638 STAG2Q8N3U4 1231 aa10.11□□□□□ -0.79
CALD1-219ENST00000480638 SLC16A10Q8TF71 515 aa10.11□□□□□ -0.79
CALD1-219ENST00000480638 AIDAQ96BJ3 306 aa10.11□□□□□ -0.79
CALD1-219ENST00000480638 ZDHHC3Q9NYG2 299 aa10.11□□□□□ -0.79
CALD1-219ENST00000480638 C1orf216Q8TAB5 229 aa10.1□□□□□ -0.79
CALD1-219ENST00000480638 CHMP7Q8WUX9 453 aaPredicted RBP10.1□□□□□ -0.79
CALD1-219ENST00000480638 CLP1Q92989 425 aaKnown RBP10.1□□□□□ -0.79
CALD1-219ENST00000480638 C2orf49Q9BVC5 232 aaPredicted RBP10.1□□□□□ -0.79
CALD1-219ENST00000480638 PRMT3O60678 531 aa10.09□□□□□ -0.79
CALD1-219ENST00000480638 OCLNQ16625 522 aa10.09□□□□□ -0.79
CALD1-219ENST00000480638 TRIM22Q8IYM9 498 aa10.09□□□□□ -0.79
CALD1-219ENST00000480638 NANOS1Q8WY41 292 aaKnown RBP10.09□□□□□ -0.79
CALD1-219ENST00000480638 PRIMPOLQ96LW4 560 aa10.09□□□□□ -0.79
CALD1-219ENST00000480638 RUBCNLQ9H714 662 aa10.09□□□□□ -0.79
CALD1-219ENST00000480638 SLAIN2Q9P270 581 aa10.09□□□□□ -0.79
CALD1-219ENST00000480638 CDC14CA4D256 554 aa10.08□□□□□ -0.8
CALD1-219ENST00000480638 FOXO3O43524 673 aa10.08□□□□□ -0.8
CALD1-219ENST00000480638 WFS1O76024 890 aa10.08□□□□□ -0.8
CALD1-219ENST00000480638 VSIG8P0DPA2 414 aa10.08□□□□□ -0.8
CALD1-219ENST00000480638 TATP17735 454 aaPredicted RBP10.08□□□□□ -0.8
CALD1-219ENST00000480638 LCE2CQ5TA81 110 aa10.08□□□□□ -0.8
CALD1-219ENST00000480638 ZNF837Q96EG3 531 aaPredicted RBP10.08□□□□□ -0.8
CALD1-219ENST00000480638 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
CALD1-219ENST00000480638 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
CALD1-219ENST00000480638 H7C1W4 665 aa10.07□□□□□ -0.8
CALD1-219ENST00000480638 THBS1P07996 1170 aa10.07□□□□□ -0.8
CALD1-219ENST00000480638 DBN1Q16643 649 aa10.07□□□□□ -0.8
CALD1-219ENST00000480638 PGBD3Q8N328 593 aa10.07□□□□□ -0.8
CALD1-219ENST00000480638 GMCL1Q96IK5 515 aa10.07□□□□□ -0.8
CALD1-219ENST00000480638 FKBP5Q13451 457 aaPredicted RBP10.06□□□□□ -0.8
CALD1-219ENST00000480638 TREML4Q6UXN2 200 aa10.06□□□□□ -0.8
CALD1-219ENST00000480638 RETREG2Q8NC44 543 aa10.06□□□□□ -0.8
CALD1-219ENST00000480638 IRF7Q92985 503 aa10.06□□□□□ -0.8
CALD1-219ENST00000480638 NUCKS1Q9H1E3 243 aaKnown RBP10.06□□□□□ -0.8
CALD1-219ENST00000480638 CXXC1Q9P0U4 656 aaPredicted RBP10.06□□□□□ -0.8
CALD1-219ENST00000480638 USTQ9Y2C2 406 aa10.06□□□□□ -0.8
CALD1-219ENST00000480638 HCN4Q9Y3Q4 1203 aa10.06□□□□□ -0.8
CALD1-219ENST00000480638 CARNS1A5YM72 827 aa10.05□□□□□ -0.8
CALD1-219ENST00000480638 LBRQ14739 615 aaKnown RBP10.05□□□□□ -0.8
CALD1-219ENST00000480638 LCE2AQ5TA79 106 aaPredicted RBP10.05□□□□□ -0.8
CALD1-219ENST00000480638 SV2AQ7L0J3 742 aa10.05□□□□□ -0.8
CALD1-219ENST00000480638 VWA5B2Q8N398 1253 aa10.05□□□□□ -0.8
CALD1-219ENST00000480638 PHACTR1Q9C0D0 580 aa10.05□□□□□ -0.8
CALD1-219ENST00000480638 C1orf53Q5VUE5 145 aa10.04□□□□□ -0.8
CALD1-219ENST00000480638 ALDH16A1Q8IZ83 802 aa10.04□□□□□ -0.8
CALD1-219ENST00000480638 ZIC5Q96T25 663 aa10.04□□□□□ -0.8
CALD1-219ENST00000480638 ATP2B4P23634 1241 aa10.03□□□□□ -0.8
CALD1-219ENST00000480638 ARSJQ5FYB0 599 aaPredicted RBP10.03□□□□□ -0.8
CALD1-219ENST00000480638 EFHC2Q5JST6 749 aa10.03□□□□□ -0.8
CALD1-219ENST00000480638 BICDL1Q6ZP65 573 aa10.03□□□□□ -0.8
CALD1-219ENST00000480638 GPR161Q8N6U8 529 aaKnown RBP10.03□□□□□ -0.8
CALD1-219ENST00000480638 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
CALD1-219ENST00000480638 NGLY1Q96IV0 654 aa10.03□□□□□ -0.8
CALD1-219ENST00000480638 GPC6Q9Y625 555 aaPredicted RBP10.03□□□□□ -0.8
CALD1-219ENST00000480638 A0A1W2PNR3 127 aa10.02□□□□□ -0.81
CALD1-219ENST00000480638 UBAP2LQ14157 1087 aaKnown RBP10.02□□□□□ -0.81
CALD1-219ENST00000480638 C7orf43Q8WVR3 580 aa10.02□□□□□ -0.81
CALD1-219ENST00000480638 NLRP8Q86W28 1048 aa10.01□□□□□ -0.81
CALD1-219ENST00000480638 GTPBP3Q969Y2 492 aaKnown RBP10.01□□□□□ -0.81
CALD1-219ENST00000480638 VTI1AQ96AJ9 217 aa10.01□□□□□ -0.81
CALD1-219ENST00000480638 KLRG1Q96E93 195 aa10.01□□□□□ -0.81
CALD1-219ENST00000480638 QTRT2Q9H974 415 aaKnown RBP10.01□□□□□ -0.81
CALD1-219ENST00000480638 MKNK1Q9BUB5 465 aa10□□□□□ -0.81
CALD1-219ENST00000480638 GPR25O00155 361 aa9.99□□□□□ -0.81
CALD1-219ENST00000480638 GMPRP36959 345 aa9.99□□□□□ -0.81
CALD1-219ENST00000480638 RTN1Q16799 776 aa9.99□□□□□ -0.81
CALD1-219ENST00000480638 COL26A1Q96A83 441 aa9.99□□□□□ -0.81
CALD1-219ENST00000480638 FOXR1Q6PIV2 292 aa9.98□□□□□ -0.81
CALD1-219ENST00000480638 FIGNL1Q6PIW4 674 aa9.98□□□□□ -0.81
CALD1-219ENST00000480638 GJA3Q9Y6H8 435 aa9.98□□□□□ -0.81
CALD1-219ENST00000480638 PTCD1O75127 700 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms