RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 MSL1Q68DK7 614 aa15.82■□□□□ 0.12
CCM2-212ENST00000480382 TSPYL4Q9UJ04 414 aa15.82■□□□□ 0.12
CCM2-212ENST00000480382 ZBTB1Q9Y2K1 713 aa15.82■□□□□ 0.12
CCM2-212ENST00000480382 PTGER2P43116 358 aa15.81■□□□□ 0.12
CCM2-212ENST00000480382 SCN7AQ01118 1682 aa15.8■□□□□ 0.12
CCM2-212ENST00000480382 COL15A1P39059 1388 aa15.8■□□□□ 0.12
CCM2-212ENST00000480382 SOS1Q07889 1333 aaPredicted RBP15.8■□□□□ 0.12
CCM2-212ENST00000480382 STARD3NLO95772 234 aa15.8■□□□□ 0.12
CCM2-212ENST00000480382 SNRPA1P09661 255 aaKnown RBP15.8■□□□□ 0.12
CCM2-212ENST00000480382 ADRA2BP18089 450 aa15.8■□□□□ 0.12
CCM2-212ENST00000480382 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
CCM2-212ENST00000480382 SGIP1Q9BQI5 828 aa15.8■□□□□ 0.12
CCM2-212ENST00000480382 TEX13AQ9BXU3 409 aaPredicted RBP15.8■□□□□ 0.12
CCM2-212ENST00000480382 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
CCM2-212ENST00000480382 EIF4A1P60842 406 aaKnown RBP15.79■□□□□ 0.12
CCM2-212ENST00000480382 ARHGEF1Q92888 912 aaKnown RBP15.79■□□□□ 0.12
CCM2-212ENST00000480382 PPP1R1BQ9UD71 204 aaPredicted RBP15.79■□□□□ 0.12
CCM2-212ENST00000480382 BCORQ6W2J9 1755 aa15.79■□□□□ 0.12
CCM2-212ENST00000480382 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
CCM2-212ENST00000480382 CANXP27824 592 aaKnown RBP15.78■□□□□ 0.12
CCM2-212ENST00000480382 BABAM1Q9NWV8 329 aa15.78■□□□□ 0.12
CCM2-212ENST00000480382 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
CCM2-212ENST00000480382 A1BGP04217 495 aa15.77■□□□□ 0.12
CCM2-212ENST00000480382 RFC4P35249 363 aa15.77■□□□□ 0.12
CCM2-212ENST00000480382 USP42Q9H9J4 1324 aaKnown RBP15.76■□□□□ 0.11
CCM2-212ENST00000480382 CHL1O00533 1208 aa15.76■□□□□ 0.11
CCM2-212ENST00000480382 GIGYF1O75420 1035 aaPredicted RBP15.76■□□□□ 0.11
CCM2-212ENST00000480382 POLD1P28340 1107 aa15.76■□□□□ 0.11
CCM2-212ENST00000480382 PIP4K2AP48426 406 aaPredicted RBP15.76■□□□□ 0.11
CCM2-212ENST00000480382 MIER1Q8N108 512 aa15.76■□□□□ 0.11
CCM2-212ENST00000480382 SRP68Q9UHB9 627 aaKnown RBP15.76■□□□□ 0.11
CCM2-212ENST00000480382 SALL2Q9Y467 1007 aaPredicted RBP15.76■□□□□ 0.11
CCM2-212ENST00000480382 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
CCM2-212ENST00000480382 CCDC27Q2M243 656 aa15.75■□□□□ 0.11
CCM2-212ENST00000480382 CFAP44Q96MT7 982 aa15.75■□□□□ 0.11
CCM2-212ENST00000480382 IFT57Q9NWB7 429 aa15.75■□□□□ 0.11
CCM2-212ENST00000480382 ZNF330Q9Y3S2 320 aaPredicted RBP15.75■□□□□ 0.11
CCM2-212ENST00000480382 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
CCM2-212ENST00000480382 GYS1P13807 737 aa15.74■□□□□ 0.11
CCM2-212ENST00000480382 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
CCM2-212ENST00000480382 KRT24Q2M2I5 525 aa15.74■□□□□ 0.11
CCM2-212ENST00000480382 WWC1Q8IX03 1113 aa15.74■□□□□ 0.11
CCM2-212ENST00000480382 ARXQ96QS3 562 aa15.74■□□□□ 0.11
CCM2-212ENST00000480382 MBIPQ9NS73 344 aa15.74■□□□□ 0.11
CCM2-212ENST00000480382 IL6STP40189 918 aaPredicted RBP15.73■□□□□ 0.11
CCM2-212ENST00000480382 GNAI1P63096 354 aa15.73■□□□□ 0.11
CCM2-212ENST00000480382 USPL1Q5W0Q7 1092 aa15.73■□□□□ 0.11
CCM2-212ENST00000480382 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
CCM2-212ENST00000480382 ZPR1O75312 459 aa15.72■□□□□ 0.11
CCM2-212ENST00000480382 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
CCM2-212ENST00000480382 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
CCM2-212ENST00000480382 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
CCM2-212ENST00000480382 MMP10P09238 476 aa15.71■□□□□ 0.11
CCM2-212ENST00000480382 FKBP8Q14318 412 aa15.71■□□□□ 0.11
CCM2-212ENST00000480382 KLHL34Q8N239 644 aa15.71■□□□□ 0.11
CCM2-212ENST00000480382 FHDC1Q9C0D6 1143 aaPredicted RBP15.71■□□□□ 0.11
CCM2-212ENST00000480382 NARFQ9UHQ1 456 aa15.71■□□□□ 0.11
CCM2-212ENST00000480382 AFDNP55196 1824 aaKnown RBP15.71■□□□□ 0.1
CCM2-212ENST00000480382 A0A087WZG4 1122 aa15.7■□□□□ 0.1
CCM2-212ENST00000480382 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
CCM2-212ENST00000480382 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
CCM2-212ENST00000480382 TSR2Q969E8 191 aaKnown RBP15.7■□□□□ 0.1
CCM2-212ENST00000480382 TBC1D2BQ9UPU7 963 aa15.7■□□□□ 0.1
CCM2-212ENST00000480382 KIF13BQ9NQT8 1826 aa15.7■□□□□ 0.1
CCM2-212ENST00000480382 EIF2S2P20042 333 aaKnown RBP15.69■□□□□ 0.1
CCM2-212ENST00000480382 NECTIN2Q92692 538 aa15.69■□□□□ 0.1
CCM2-212ENST00000480382 BCL2L12Q9HB09 334 aa15.69■□□□□ 0.1
CCM2-212ENST00000480382 IL16Q14005 1332 aa15.68■□□□□ 0.1
CCM2-212ENST00000480382 MYL6BP14649 208 aa15.68■□□□□ 0.1
CCM2-212ENST00000480382 DZIP3Q86Y13 1208 aaKnown RBP15.68■□□□□ 0.1
CCM2-212ENST00000480382 KIAA1551Q9HCM1 1747 aa15.68■□□□□ 0.1
CCM2-212ENST00000480382 NRXN2Q9P2S2 1712 aa15.68■□□□□ 0.1
CCM2-212ENST00000480382 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
CCM2-212ENST00000480382 NUP98P52948 1817 aa15.67■□□□□ 0.1
CCM2-212ENST00000480382 CAMTA2O94983 1202 aa15.67■□□□□ 0.1
CCM2-212ENST00000480382 DUSP27Q5VZP5 1158 aa15.67■□□□□ 0.1
CCM2-212ENST00000480382 HOXB7P09629 217 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 DDR1Q08345 913 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 PROSER3Q2NL68 480 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 HDGFL1Q5TGJ6 251 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 WDR63Q8IWG1 891 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 NGEFQ8N5V2 710 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 SYT17Q9BSW7 474 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 C10orf71Q711Q0 1435 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 ZNF521Q96K83 1311 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
CCM2-212ENST00000480382 N4BP2Q86UW6 1770 aaPredicted RBP15.65■□□□□ 0.1
CCM2-212ENST00000480382 ELL2O00472 640 aaPredicted RBP15.65■□□□□ 0.1
CCM2-212ENST00000480382 ANXA1P04083 346 aa15.65■□□□□ 0.1
CCM2-212ENST00000480382 PDIA6Q15084 440 aa15.65■□□□□ 0.1
CCM2-212ENST00000480382 C8orf58Q8NAV2 365 aa15.65■□□□□ 0.1
CCM2-212ENST00000480382 PARP3Q9Y6F1 533 aa15.65■□□□□ 0.1
CCM2-212ENST00000480382 ANKRD36CQ5JPF3 1778 aa15.64■□□□□ 0.1
CCM2-212ENST00000480382 GOLGB1Q14789 3259 aaKnown RBP15.64■□□□□ 0.09
CCM2-212ENST00000480382 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
CCM2-212ENST00000480382 TM4SF1P30408 202 aa15.64■□□□□ 0.09
CCM2-212ENST00000480382 NFIXQ14938 502 aa15.64■□□□□ 0.09
CCM2-212ENST00000480382 TBC1D9BQ66K14 1250 aa15.64■□□□□ 0.09
CCM2-212ENST00000480382 BICDL1Q6ZP65 573 aa15.64■□□□□ 0.09
CCM2-212ENST00000480382 LRP10Q7Z4F1 713 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms