RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 ERICH4A6NGS2 130 aa15.85■□□□□ 0.13
MCF2L-225ENST00000480321 DYNC1I1O14576 645 aa15.85■□□□□ 0.13
MCF2L-225ENST00000480321 RALGAPBQ86X10 1494 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 HDAC1Q13547 482 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-225ENST00000480321 ZNF76P36508 570 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 CAMK4Q16566 473 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 STX1AQ16623 288 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 LRRFIP2Q9Y608 721 aaKnown RBP15.84■□□□□ 0.13
MCF2L-225ENST00000480321 FKBP15Q5T1M5 1219 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 C8orf76Q96K31 380 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 EVI5LQ96CN4 794 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 DDX11Q96FC9 970 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 PYM1Q9BRP8 204 aaKnown RBP15.84■□□□□ 0.13
MCF2L-225ENST00000480321 TMOD2Q9NZR1 351 aa15.84■□□□□ 0.13
MCF2L-225ENST00000480321 ARHGAP45Q92619 1136 aa15.83■□□□□ 0.13
MCF2L-225ENST00000480321 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.13
MCF2L-225ENST00000480321 C11orf95C9JLR9 678 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-225ENST00000480321 TRIM27P14373 513 aa15.83■□□□□ 0.12
MCF2L-225ENST00000480321 EZRP15311 586 aaKnown RBP15.83■□□□□ 0.12
MCF2L-225ENST00000480321 DHX37Q8IY37 1157 aaKnown RBP15.83■□□□□ 0.12
MCF2L-225ENST00000480321 ABCF2Q9UG63 623 aa15.83■□□□□ 0.12
MCF2L-225ENST00000480321 PPP1R12BO60237 982 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-225ENST00000480321 METTL24Q5JXM2 366 aa15.83■□□□□ 0.12
MCF2L-225ENST00000480321 TNNT1P13805 278 aa15.83■□□□□ 0.12
MCF2L-225ENST00000480321 UBE2HP62256 183 aa15.83■□□□□ 0.12
MCF2L-225ENST00000480321 PIBF1Q8WXW3 757 aa15.83■□□□□ 0.12
MCF2L-225ENST00000480321 PAXBP1Q9Y5B6 917 aa15.83■□□□□ 0.12
MCF2L-225ENST00000480321 BAG4O95429 457 aaKnown RBP15.82■□□□□ 0.12
MCF2L-225ENST00000480321 HMG20BQ9P0W2 317 aa15.82■□□□□ 0.12
MCF2L-225ENST00000480321 ZNF652Q9Y2D9 606 aa15.82■□□□□ 0.12
MCF2L-225ENST00000480321 FAM193AP78312 1265 aa15.82■□□□□ 0.12
MCF2L-225ENST00000480321 ENOX2Q16206 610 aaKnown RBP15.82■□□□□ 0.12
MCF2L-225ENST00000480321 USP5P45974 858 aa15.82■□□□□ 0.12
MCF2L-225ENST00000480321 TSG101Q99816 390 aa15.82■□□□□ 0.12
MCF2L-225ENST00000480321 TTC21BQ7Z4L5 1316 aa15.82■□□□□ 0.12
MCF2L-225ENST00000480321 DESP17661 470 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 GBP2P32456 591 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-225ENST00000480321 TBC1D9Q6ZT07 1266 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 TMOD3Q9NYL9 352 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 FERMT3Q86UX7 667 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 CCDC150Q8NCX0 1101 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 CCDC97Q96F63 343 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-225ENST00000480321 MIS18AQ9NYP9 233 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 NESP48681 1621 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 PTCD1O75127 700 aaKnown RBP15.81■□□□□ 0.12
MCF2L-225ENST00000480321 STX6O43752 255 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 SMARCA5O60264 1052 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-225ENST00000480321 CETN2P41208 172 aa15.81■□□□□ 0.12
MCF2L-225ENST00000480321 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 KIF20AO95235 890 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 TTC22Q5TAA0 569 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 MICALCLQ6ZW33 695 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 CENPHQ9H3R5 247 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 HYPKQ9NX55 129 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 MATR3P43243 847 aaKnown RBP eCLIP15.8■□□□□ 0.12
MCF2L-225ENST00000480321 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 USO1O60763 962 aaKnown RBP15.8■□□□□ 0.12
MCF2L-225ENST00000480321 URI1O94763 535 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-225ENST00000480321 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-225ENST00000480321 KIF4BQ2VIQ3 1234 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 VPS36Q86VN1 386 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 DNAAF4Q8WXU2 420 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 RNF41Q9H4P4 317 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-225ENST00000480321 ZPR1O75312 459 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 SEPT11Q9NVA2 429 aaKnown RBP15.8■□□□□ 0.12
MCF2L-225ENST00000480321 USP25Q9UHP3 1055 aa15.8■□□□□ 0.12
MCF2L-225ENST00000480321 TUBB4AP04350 444 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 PPM1FP49593 454 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-225ENST00000480321 KANK3Q6NY19 840 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 YEATS4O95619 227 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 IFIT1P09914 478 aaKnown RBP15.79■□□□□ 0.12
MCF2L-225ENST00000480321 CCDC171Q6TFL3 1326 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 ANKRD62A6NC57 917 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 POTEJP0CG39 1038 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 LRSAM1Q6UWE0 723 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 ZSCAN16Q9H4T2 348 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-225ENST00000480321 MCM10Q7L590 875 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 SNX21Q969T3 373 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 RAB34Q9BZG1 259 aa15.79■□□□□ 0.12
MCF2L-225ENST00000480321 ADCY5O95622 1261 aa15.78■□□□□ 0.12
MCF2L-225ENST00000480321 ANAPC15P60006 121 aa15.78■□□□□ 0.12
MCF2L-225ENST00000480321 NUCB1Q02818 461 aa15.78■□□□□ 0.12
MCF2L-225ENST00000480321 CAVIN4Q5BKX8 364 aa15.78■□□□□ 0.12
MCF2L-225ENST00000480321 ECHDC1Q9NTX5 307 aa15.78■□□□□ 0.12
MCF2L-225ENST00000480321 TAX1BP1Q86VP1 789 aa15.78■□□□□ 0.12
MCF2L-225ENST00000480321 DBF4Q9UBU7 674 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-225ENST00000480321 PAFAH1B1P43034 410 aa15.77■□□□□ 0.12
MCF2L-225ENST00000480321 WAPLQ7Z5K2 1190 aa15.77■□□□□ 0.12
MCF2L-225ENST00000480321 PRKCSHP14314 528 aaPredicted RBP15.77■□□□□ 0.12
MCF2L-225ENST00000480321 CLCN1P35523 988 aa15.77■□□□□ 0.12
MCF2L-225ENST00000480321 GJB2P29033 226 aa15.77■□□□□ 0.12
MCF2L-225ENST00000480321 FSIP1Q8NA03 581 aa15.77■□□□□ 0.12
MCF2L-225ENST00000480321 MYD88Q99836 296 aa15.77■□□□□ 0.12
MCF2L-225ENST00000480321 POLR3DP05423 398 aaPredicted RBP15.77■□□□□ 0.11
MCF2L-225ENST00000480321 SSRP1Q08945 709 aaKnown RBP15.77■□□□□ 0.11
MCF2L-225ENST00000480321 NUP160Q12769 1436 aa15.77■□□□□ 0.11
MCF2L-225ENST00000480321 BMS1Q14692 1282 aaKnown RBP15.77■□□□□ 0.11
MCF2L-225ENST00000480321 CNNM3Q8NE01 707 aa15.77■□□□□ 0.11
MCF2L-225ENST00000480321 BOLA2Q9H3K6 86 aa15.77■□□□□ 0.11
MCF2L-225ENST00000480321 SEC63Q9UGP8 760 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms