RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 ADRA2BP18089 450 aa18.16■□□□□ 0.5
PCIF1-202ENST00000479348 INTS5Q6P9B9 1019 aaKnown RBP18.16■□□□□ 0.5
PCIF1-202ENST00000479348 QSER1Q2KHR3 1735 aa18.15■□□□□ 0.5
PCIF1-202ENST00000479348 PNPLA7Q6ZV29 1317 aa18.15■□□□□ 0.5
PCIF1-202ENST00000479348 HOXB7P09629 217 aa18.15■□□□□ 0.5
PCIF1-202ENST00000479348 USP16Q9Y5T5 823 aa18.15■□□□□ 0.5
PCIF1-202ENST00000479348 SLC16A10Q8TF71 515 aa18.14■□□□□ 0.49
PCIF1-202ENST00000479348 MYH16Q9H6N6 1097 aa18.14■□□□□ 0.49
PCIF1-202ENST00000479348 SOS1Q07889 1333 aaPredicted RBP18.13■□□□□ 0.49
PCIF1-202ENST00000479348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
PCIF1-202ENST00000479348 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
PCIF1-202ENST00000479348 CHMP4AQ9BY43 222 aa18.13■□□□□ 0.49
PCIF1-202ENST00000479348 MYH14Q7Z406 1995 aaKnown RBP18.12■□□□□ 0.49
PCIF1-202ENST00000479348 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
PCIF1-202ENST00000479348 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
PCIF1-202ENST00000479348 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
PCIF1-202ENST00000479348 ERBB4Q15303 1308 aa18.11■□□□□ 0.49
PCIF1-202ENST00000479348 IL6STP40189 918 aaPredicted RBP18.11■□□□□ 0.49
PCIF1-202ENST00000479348 COL23A1Q86Y22 540 aaPredicted RBP18.11■□□□□ 0.49
PCIF1-202ENST00000479348 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
PCIF1-202ENST00000479348 E9PSI1 815 aa18.1■□□□□ 0.49
PCIF1-202ENST00000479348 PHF14O94880 888 aa18.1■□□□□ 0.49
PCIF1-202ENST00000479348 A1BGP04217 495 aa18.1■□□□□ 0.49
PCIF1-202ENST00000479348 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
PCIF1-202ENST00000479348 DUSP27Q5VZP5 1158 aa18.1■□□□□ 0.49
PCIF1-202ENST00000479348 TSR2Q969E8 191 aaKnown RBP18.1■□□□□ 0.49
PCIF1-202ENST00000479348 FANCIQ9NVI1 1328 aa18.09■□□□□ 0.49
PCIF1-202ENST00000479348 TUBGCP6Q96RT7 1819 aa18.09■□□□□ 0.49
PCIF1-202ENST00000479348 A0A087WZG4 1122 aa18.09■□□□□ 0.49
PCIF1-202ENST00000479348 MSH5O43196 834 aa18.09■□□□□ 0.49
PCIF1-202ENST00000479348 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
PCIF1-202ENST00000479348 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
PCIF1-202ENST00000479348 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
PCIF1-202ENST00000479348 AMIGO3Q86WK7 504 aa18.09■□□□□ 0.49
PCIF1-202ENST00000479348 ARHGEF1Q92888 912 aaKnown RBP18.09■□□□□ 0.49
PCIF1-202ENST00000479348 LAMB4A4D0S4 1761 aa18.09■□□□□ 0.49
PCIF1-202ENST00000479348 CASZ1Q86V15 1759 aa18.08■□□□□ 0.49
PCIF1-202ENST00000479348 RFC4P35249 363 aa18.08■□□□□ 0.49
PCIF1-202ENST00000479348 KRT24Q2M2I5 525 aa18.08■□□□□ 0.49
PCIF1-202ENST00000479348 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.49
PCIF1-202ENST00000479348 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
PCIF1-202ENST00000479348 SLFN5Q08AF3 891 aa18.07■□□□□ 0.48
PCIF1-202ENST00000479348 C8orf58Q8NAV2 365 aa18.07■□□□□ 0.48
PCIF1-202ENST00000479348 PDGFDQ9GZP0 370 aaPredicted RBP18.07■□□□□ 0.48
PCIF1-202ENST00000479348 MTFR1LQ9H019 292 aa18.07■□□□□ 0.48
PCIF1-202ENST00000479348 COL15A1P39059 1388 aa18.07■□□□□ 0.48
PCIF1-202ENST00000479348 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
PCIF1-202ENST00000479348 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
PCIF1-202ENST00000479348 NBPF26B4DH59 902 aa18.05■□□□□ 0.48
PCIF1-202ENST00000479348 NBPF10Q6P3W6 841 aaKnown RBP18.05■□□□□ 0.48
PCIF1-202ENST00000479348 NBPF15Q8N660 670 aa18.05■□□□□ 0.48
PCIF1-202ENST00000479348 SPON1Q9HCB6 807 aa18.05■□□□□ 0.48
PCIF1-202ENST00000479348 ELL2O00472 640 aaPredicted RBP18.04■□□□□ 0.48
PCIF1-202ENST00000479348 ZPR1O75312 459 aa18.04■□□□□ 0.48
PCIF1-202ENST00000479348 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
PCIF1-202ENST00000479348 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
PCIF1-202ENST00000479348 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCIF1-202ENST00000479348 DBF4Q9UBU7 674 aaPredicted RBP18.04■□□□□ 0.48
PCIF1-202ENST00000479348 NARFQ9UHQ1 456 aa18.04■□□□□ 0.48
PCIF1-202ENST00000479348 USP42Q9H9J4 1324 aaKnown RBP18.04■□□□□ 0.48
PCIF1-202ENST00000479348 ZBTB7AO95365 584 aa18.03■□□□□ 0.48
PCIF1-202ENST00000479348 EXOSC9Q06265 439 aaKnown RBP18.03■□□□□ 0.48
PCIF1-202ENST00000479348 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
PCIF1-202ENST00000479348 NLGN1Q8N2Q7 840 aa18.03■□□□□ 0.48
PCIF1-202ENST00000479348 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
PCIF1-202ENST00000479348 ZBED9Q6R2W3 1325 aa18.03■□□□□ 0.48
PCIF1-202ENST00000479348 RGL2O15211 777 aa18.02■□□□□ 0.48
PCIF1-202ENST00000479348 PDIA6Q15084 440 aa18.02■□□□□ 0.48
PCIF1-202ENST00000479348 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
PCIF1-202ENST00000479348 GYS1P13807 737 aa18.01■□□□□ 0.47
PCIF1-202ENST00000479348 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
PCIF1-202ENST00000479348 DZIP3Q86Y13 1208 aaKnown RBP18.01■□□□□ 0.47
PCIF1-202ENST00000479348 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
PCIF1-202ENST00000479348 CDCA7LQ96GN5 454 aa18.01■□□□□ 0.47
PCIF1-202ENST00000479348 VAMP4O75379 141 aa18■□□□□ 0.47
PCIF1-202ENST00000479348 MYL6BP14649 208 aa18■□□□□ 0.47
PCIF1-202ENST00000479348 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
PCIF1-202ENST00000479348 HYPKQ9NX55 129 aa18■□□□□ 0.47
PCIF1-202ENST00000479348 CHPF2Q9P2E5 772 aa18■□□□□ 0.47
PCIF1-202ENST00000479348 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
PCIF1-202ENST00000479348 C4AP0C0L4 1744 aa18■□□□□ 0.47
PCIF1-202ENST00000479348 POLD1P28340 1107 aa17.99■□□□□ 0.47
PCIF1-202ENST00000479348 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
PCIF1-202ENST00000479348 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
PCIF1-202ENST00000479348 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
PCIF1-202ENST00000479348 ERVV-1B6SEH8 477 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 CLEC4GQ6UXB4 293 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 ZNF428Q96B54 188 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 ARXQ96QS3 562 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 SGIP1Q9BQI5 828 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 CAMTA2O94983 1202 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 CT47B1P0C2W7 299 aaPredicted RBP17.98■□□□□ 0.47
PCIF1-202ENST00000479348 PTGER2P43116 358 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 PROSER3Q2NL68 480 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
PCIF1-202ENST00000479348 COL24A1Q17RW2 1714 aa17.97■□□□□ 0.47
PCIF1-202ENST00000479348 MSL1Q68DK7 614 aa17.97■□□□□ 0.47
PCIF1-202ENST00000479348 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms