RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-210ENST00000479295 EIF5P55010 431 aaKnown RBP12.82□□□□□ -0.36
PTPN18-210ENST00000479295 THUMPD2Q9BTF0 503 aaKnown RBP12.82□□□□□ -0.36
PTPN18-210ENST00000479295 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
PTPN18-210ENST00000479295 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
PTPN18-210ENST00000479295 GYS1P13807 737 aa12.81□□□□□ -0.36
PTPN18-210ENST00000479295 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
PTPN18-210ENST00000479295 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
PTPN18-210ENST00000479295 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
PTPN18-210ENST00000479295 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
PTPN18-210ENST00000479295 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
PTPN18-210ENST00000479295 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
PTPN18-210ENST00000479295 PPP1R1BQ9UD71 204 aaPredicted RBP12.8□□□□□ -0.36
PTPN18-210ENST00000479295 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
PTPN18-210ENST00000479295 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
PTPN18-210ENST00000479295 COL15A1P39059 1388 aa12.8□□□□□ -0.36
PTPN18-210ENST00000479295 CHL1O00533 1208 aa12.79□□□□□ -0.36
PTPN18-210ENST00000479295 MSH5O43196 834 aa12.79□□□□□ -0.36
PTPN18-210ENST00000479295 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
PTPN18-210ENST00000479295 RFC4P35249 363 aa12.79□□□□□ -0.36
PTPN18-210ENST00000479295 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
PTPN18-210ENST00000479295 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
PTPN18-210ENST00000479295 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
PTPN18-210ENST00000479295 PRAMEF22A3QJZ6 481 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 APAF1O14727 1248 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 RGL2O15211 777 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 MRS2Q9HD23 443 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
PTPN18-210ENST00000479295 A0A087WZG4 1122 aa12.77□□□□□ -0.37
PTPN18-210ENST00000479295 A1BGP04217 495 aa12.77□□□□□ -0.37
PTPN18-210ENST00000479295 TM4SF1P30408 202 aa12.77□□□□□ -0.37
PTPN18-210ENST00000479295 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
PTPN18-210ENST00000479295 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
PTPN18-210ENST00000479295 FKBP8Q14318 412 aa12.76□□□□□ -0.37
PTPN18-210ENST00000479295 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
PTPN18-210ENST00000479295 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
PTPN18-210ENST00000479295 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
PTPN18-210ENST00000479295 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
PTPN18-210ENST00000479295 TSPYL4Q9UJ04 414 aa12.76□□□□□ -0.37
PTPN18-210ENST00000479295 MMP10P09238 476 aa12.75□□□□□ -0.37
PTPN18-210ENST00000479295 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
PTPN18-210ENST00000479295 SCN7AQ01118 1682 aa12.75□□□□□ -0.37
PTPN18-210ENST00000479295 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
PTPN18-210ENST00000479295 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
PTPN18-210ENST00000479295 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
PTPN18-210ENST00000479295 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
PTPN18-210ENST00000479295 C10orf71Q711Q0 1435 aa12.74□□□□□ -0.37
PTPN18-210ENST00000479295 DDR1Q08345 913 aa12.74□□□□□ -0.37
PTPN18-210ENST00000479295 LRP10Q7Z4F1 713 aa12.74□□□□□ -0.37
PTPN18-210ENST00000479295 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
PTPN18-210ENST00000479295 POLRMTO00411 1230 aaKnown RBP12.73□□□□□ -0.37
PTPN18-210ENST00000479295 ZPR1O75312 459 aa12.73□□□□□ -0.37
PTPN18-210ENST00000479295 CAMTA2O94983 1202 aa12.73□□□□□ -0.37
PTPN18-210ENST00000479295 HOXB7P09629 217 aa12.73□□□□□ -0.37
PTPN18-210ENST00000479295 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
PTPN18-210ENST00000479295 BCORQ6W2J9 1755 aa12.73□□□□□ -0.37
PTPN18-210ENST00000479295 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
PTPN18-210ENST00000479295 PDIA6Q15084 440 aa12.72□□□□□ -0.37
PTPN18-210ENST00000479295 NLGN2Q8NFZ4 835 aa12.72□□□□□ -0.37
PTPN18-210ENST00000479295 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
PTPN18-210ENST00000479295 GNAI1P63096 354 aa12.71□□□□□ -0.37
PTPN18-210ENST00000479295 NFIXQ14938 502 aa12.71□□□□□ -0.37
PTPN18-210ENST00000479295 CLEC4GQ6UXB4 293 aa12.71□□□□□ -0.37
PTPN18-210ENST00000479295 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
PTPN18-210ENST00000479295 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
PTPN18-210ENST00000479295 MBIPQ9NS73 344 aa12.71□□□□□ -0.37
PTPN18-210ENST00000479295 IL16Q14005 1332 aa12.7□□□□□ -0.38
PTPN18-210ENST00000479295 TGFB2P61812 414 aa12.7□□□□□ -0.38
PTPN18-210ENST00000479295 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
PTPN18-210ENST00000479295 PARP3Q9Y6F1 533 aa12.7□□□□□ -0.38
PTPN18-210ENST00000479295 PXDNLA1KZ92 1463 aa12.7□□□□□ -0.38
PTPN18-210ENST00000479295 ERVV-1B6SEH8 477 aa12.69□□□□□ -0.38
PTPN18-210ENST00000479295 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
PTPN18-210ENST00000479295 DZIP3Q86Y13 1208 aaKnown RBP12.69□□□□□ -0.38
PTPN18-210ENST00000479295 AFDNP55196 1824 aaKnown RBP12.68□□□□□ -0.38
PTPN18-210ENST00000479295 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
PTPN18-210ENST00000479295 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
PTPN18-210ENST00000479295 ZNF521Q96K83 1311 aa12.67□□□□□ -0.38
PTPN18-210ENST00000479295 KCNA3P22001 575 aa12.67□□□□□ -0.38
PTPN18-210ENST00000479295 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
PTPN18-210ENST00000479295 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPN18-210ENST00000479295 CARMIL3Q8ND23 1372 aa12.67□□□□□ -0.38
PTPN18-210ENST00000479295 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
PTPN18-210ENST00000479295 SERPINB2P05120 415 aa12.66□□□□□ -0.38
PTPN18-210ENST00000479295 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
PTPN18-210ENST00000479295 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
PTPN18-210ENST00000479295 MAP3K15Q6ZN16 1313 aa12.65□□□□□ -0.38
PTPN18-210ENST00000479295 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPN18-210ENST00000479295 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
PTPN18-210ENST00000479295 DUSP27Q5VZP5 1158 aa12.65□□□□□ -0.38
PTPN18-210ENST00000479295 TTLL7Q6ZT98 887 aa12.65□□□□□ -0.38
PTPN18-210ENST00000479295 FAM9BQ8IZU0 186 aa12.65□□□□□ -0.38
PTPN18-210ENST00000479295 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
PTPN18-210ENST00000479295 LAS1LQ9Y4W2 734 aaKnown RBP12.65□□□□□ -0.38
PTPN18-210ENST00000479295 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
PTPN18-210ENST00000479295 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
PTPN18-210ENST00000479295 HLFQ16534 295 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms