RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 CCDC87Q9NVE4 849 aa22.55■■□□□ 1.2
CDK11A-215ENST00000478901 USP16Q9Y5T5 823 aa22.55■■□□□ 1.2
CDK11A-215ENST00000478901 STARD3NLO95772 234 aa22.54■■□□□ 1.2
CDK11A-215ENST00000478901 ZNF853P0CG23 659 aa22.54■■□□□ 1.2
CDK11A-215ENST00000478901 CALD1Q05682 793 aaKnown RBP22.54■■□□□ 1.2
CDK11A-215ENST00000478901 FLAD1Q8NFF5 587 aa22.54■■□□□ 1.2
CDK11A-215ENST00000478901 RTCBQ9Y3I0 505 aaKnown RBP22.54■■□□□ 1.2
CDK11A-215ENST00000478901 ZBTB7AO95365 584 aa22.53■■□□□ 1.2
CDK11A-215ENST00000478901 SRCAPQ6ZRS2 3230 aa22.52■■□□□ 1.2
CDK11A-215ENST00000478901 GIGYF1O75420 1035 aaPredicted RBP22.52■■□□□ 1.2
CDK11A-215ENST00000478901 IFT57Q9NWB7 429 aa22.52■■□□□ 1.2
CDK11A-215ENST00000478901 ZBTB1Q9Y2K1 713 aa22.52■■□□□ 1.2
CDK11A-215ENST00000478901 MSH5O43196 834 aa22.51■■□□□ 1.19
CDK11A-215ENST00000478901 GNAI1P63096 354 aa22.51■■□□□ 1.19
CDK11A-215ENST00000478901 NGEFQ8N5V2 710 aa22.51■■□□□ 1.19
CDK11A-215ENST00000478901 MBIPQ9NS73 344 aa22.51■■□□□ 1.19
CDK11A-215ENST00000478901 TRAPPC3LQ5T215 181 aa22.5■■□□□ 1.19
CDK11A-215ENST00000478901 SLC16A10Q8TF71 515 aa22.5■■□□□ 1.19
CDK11A-215ENST00000478901 A1BGP04217 495 aa22.49■■□□□ 1.19
CDK11A-215ENST00000478901 ARHGEF1Q92888 912 aaKnown RBP22.49■■□□□ 1.19
CDK11A-215ENST00000478901 MTFR1LQ9H019 292 aa22.49■■□□□ 1.19
CDK11A-215ENST00000478901 ATF5Q9Y2D1 282 aaPredicted RBP22.49■■□□□ 1.19
CDK11A-215ENST00000478901 SOS1Q07889 1333 aaPredicted RBP22.49■■□□□ 1.19
CDK11A-215ENST00000478901 LAMB4A4D0S4 1761 aa22.48■■□□□ 1.19
CDK11A-215ENST00000478901 ADRA2BP18089 450 aa22.48■■□□□ 1.19
CDK11A-215ENST00000478901 CANXP27824 592 aaKnown RBP22.48■■□□□ 1.19
CDK11A-215ENST00000478901 KRT24Q2M2I5 525 aa22.48■■□□□ 1.19
CDK11A-215ENST00000478901 WDR63Q8IWG1 891 aa22.47■■□□□ 1.19
CDK11A-215ENST00000478901 SPON1Q9HCB6 807 aa22.47■■□□□ 1.19
CDK11A-215ENST00000478901 IL16Q14005 1332 aa22.47■■□□□ 1.19
CDK11A-215ENST00000478901 C4AP0C0L4 1744 aa22.46■■□□□ 1.19
CDK11A-215ENST00000478901 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
CDK11A-215ENST00000478901 LRP5O75197 1615 aa22.46■■□□□ 1.19
CDK11A-215ENST00000478901 EIF5P55010 431 aaKnown RBP22.45■■□□□ 1.18
CDK11A-215ENST00000478901 ZNF521Q96K83 1311 aa22.45■■□□□ 1.18
CDK11A-215ENST00000478901 COL24A1Q17RW2 1714 aa22.45■■□□□ 1.18
CDK11A-215ENST00000478901 NBPF26B4DH59 902 aa22.44■■□□□ 1.18
CDK11A-215ENST00000478901 RFC4P35249 363 aa22.44■■□□□ 1.18
CDK11A-215ENST00000478901 COL15A1P39059 1388 aa22.44■■□□□ 1.18
CDK11A-215ENST00000478901 PTGER2P43116 358 aa22.44■■□□□ 1.18
CDK11A-215ENST00000478901 NBPF10Q6P3W6 841 aaKnown RBP22.44■■□□□ 1.18
CDK11A-215ENST00000478901 NBPF15Q8N660 670 aa22.44■■□□□ 1.18
CDK11A-215ENST00000478901 TSR2Q969E8 191 aaKnown RBP22.44■■□□□ 1.18
CDK11A-215ENST00000478901 IL6STP40189 918 aaPredicted RBP22.43■■□□□ 1.18
CDK11A-215ENST00000478901 MSL1Q68DK7 614 aa22.43■■□□□ 1.18
CDK11A-215ENST00000478901 SGIP1Q9BQI5 828 aa22.43■■□□□ 1.18
CDK11A-215ENST00000478901 SRP68Q9UHB9 627 aaKnown RBP22.43■■□□□ 1.18
CDK11A-215ENST00000478901 SPINK5Q9NQ38 1064 aaPredicted RBP22.42■■□□□ 1.18
CDK11A-215ENST00000478901 USP42Q9H9J4 1324 aaKnown RBP22.41■■□□□ 1.18
CDK11A-215ENST00000478901 EIF2S2P20042 333 aaKnown RBP22.41■■□□□ 1.18
CDK11A-215ENST00000478901 GYS1P13807 737 aa22.4■■□□□ 1.18
CDK11A-215ENST00000478901 DUSP27Q5VZP5 1158 aa22.4■■□□□ 1.18
CDK11A-215ENST00000478901 C8orf58Q8NAV2 365 aa22.4■■□□□ 1.18
CDK11A-215ENST00000478901 ZNF330Q9Y3S2 320 aaPredicted RBP22.4■■□□□ 1.18
CDK11A-215ENST00000478901 HOXB7P09629 217 aa22.39■■□□□ 1.17
CDK11A-215ENST00000478901 NARFQ9UHQ1 456 aa22.39■■□□□ 1.17
CDK11A-215ENST00000478901 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
CDK11A-215ENST00000478901 A0A087WZG4 1122 aa22.38■■□□□ 1.17
CDK11A-215ENST00000478901 ELL2O00472 640 aaPredicted RBP22.38■■□□□ 1.17
CDK11A-215ENST00000478901 USPL1Q5W0Q7 1092 aa22.38■■□□□ 1.17
CDK11A-215ENST00000478901 NECTIN2Q92692 538 aa22.38■■□□□ 1.17
CDK11A-215ENST00000478901 ZPR1O75312 459 aa22.37■■□□□ 1.17
CDK11A-215ENST00000478901 PDIA6Q15084 440 aa22.37■■□□□ 1.17
CDK11A-215ENST00000478901 TBC1D2BQ9UPU7 963 aa22.37■■□□□ 1.17
CDK11A-215ENST00000478901 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
CDK11A-215ENST00000478901 MYL6BP14649 208 aa22.36■■□□□ 1.17
CDK11A-215ENST00000478901 NLGN1Q8N2Q7 840 aa22.36■■□□□ 1.17
CDK11A-215ENST00000478901 TSPYL6Q8N831 410 aa22.36■■□□□ 1.17
CDK11A-215ENST00000478901 BCL2L12Q9HB09 334 aa22.36■■□□□ 1.17
CDK11A-215ENST00000478901 POLD1P28340 1107 aa22.35■■□□□ 1.17
CDK11A-215ENST00000478901 FKBP8Q14318 412 aa22.35■■□□□ 1.17
CDK11A-215ENST00000478901 PROSER3Q2NL68 480 aa22.35■■□□□ 1.17
CDK11A-215ENST00000478901 HDGFL1Q5TGJ6 251 aa22.35■■□□□ 1.17
CDK11A-215ENST00000478901 LRP10Q7Z4F1 713 aa22.35■■□□□ 1.17
CDK11A-215ENST00000478901 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
CDK11A-215ENST00000478901 ANXA1P04083 346 aa22.34■■□□□ 1.17
CDK11A-215ENST00000478901 GOLGA2Q08379 1002 aa22.34■■□□□ 1.17
CDK11A-215ENST00000478901 DZIP3Q86Y13 1208 aaKnown RBP22.34■■□□□ 1.17
CDK11A-215ENST00000478901 ARXQ96QS3 562 aa22.34■■□□□ 1.17
CDK11A-215ENST00000478901 MYH16Q9H6N6 1097 aa22.34■■□□□ 1.17
CDK11A-215ENST00000478901 CAMTA2O94983 1202 aa22.33■■□□□ 1.17
CDK11A-215ENST00000478901 PPP1R1BQ9UD71 204 aaPredicted RBP22.33■■□□□ 1.17
CDK11A-215ENST00000478901 SCN7AQ01118 1682 aa22.33■■□□□ 1.16
CDK11A-215ENST00000478901 CHPF2Q9P2E5 772 aa22.32■■□□□ 1.16
CDK11A-215ENST00000478901 BCORQ6W2J9 1755 aa22.31■■□□□ 1.16
CDK11A-215ENST00000478901 MMP10P09238 476 aa22.31■■□□□ 1.16
CDK11A-215ENST00000478901 EXOSC9Q06265 439 aaKnown RBP22.31■■□□□ 1.16
CDK11A-215ENST00000478901 DDX21Q9NR30 783 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDK11A-215ENST00000478901 E9PSI1 815 aa22.3■■□□□ 1.16
CDK11A-215ENST00000478901 TM4SF1P30408 202 aa22.3■■□□□ 1.16
CDK11A-215ENST00000478901 HNRNPUQ00839 825 aaKnown RBP eCLIP22.3■■□□□ 1.16
CDK11A-215ENST00000478901 SLFN5Q08AF3 891 aa22.3■■□□□ 1.16
CDK11A-215ENST00000478901 TWISTNBQ3B726 338 aaPredicted RBP22.3■■□□□ 1.16
CDK11A-215ENST00000478901 TTLL7Q6ZT98 887 aa22.3■■□□□ 1.16
CDK11A-215ENST00000478901 CDCA7LQ96GN5 454 aa22.3■■□□□ 1.16
CDK11A-215ENST00000478901 DBF4Q9UBU7 674 aaPredicted RBP22.29■■□□□ 1.16
CDK11A-215ENST00000478901 VAMP4O75379 141 aa22.27■■□□□ 1.16
CDK11A-215ENST00000478901 DDR1Q08345 913 aa22.27■■□□□ 1.16
CDK11A-215ENST00000478901 NFIXQ14938 502 aa22.27■■□□□ 1.16
CDK11A-215ENST00000478901 TBC1D9BQ66K14 1250 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms