RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 LMOD3Q0VAK6 560 aa13.11□□□□□ -0.31
SCAMP3-206ENST00000478737 CCDC146Q8IYE0 955 aa13.11□□□□□ -0.31
SCAMP3-206ENST00000478737 THUMPD2Q9BTF0 503 aaKnown RBP13.11□□□□□ -0.31
SCAMP3-206ENST00000478737 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
SCAMP3-206ENST00000478737 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
SCAMP3-206ENST00000478737 UBR2Q8IWV8 1755 aa13.1□□□□□ -0.31
SCAMP3-206ENST00000478737 EIF5P55010 431 aaKnown RBP13.1□□□□□ -0.31
SCAMP3-206ENST00000478737 MSL1Q68DK7 614 aa13.1□□□□□ -0.31
SCAMP3-206ENST00000478737 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
SCAMP3-206ENST00000478737 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
SCAMP3-206ENST00000478737 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
SCAMP3-206ENST00000478737 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
SCAMP3-206ENST00000478737 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
SCAMP3-206ENST00000478737 CCER2I3L3R5 266 aa13.09□□□□□ -0.31
SCAMP3-206ENST00000478737 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
SCAMP3-206ENST00000478737 USP42Q9H9J4 1324 aaKnown RBP13.09□□□□□ -0.31
SCAMP3-206ENST00000478737 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
SCAMP3-206ENST00000478737 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
SCAMP3-206ENST00000478737 COL5A3P25940 1745 aaPredicted RBP13.08□□□□□ -0.32
SCAMP3-206ENST00000478737 CHL1O00533 1208 aa13.08□□□□□ -0.32
SCAMP3-206ENST00000478737 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
SCAMP3-206ENST00000478737 IL6STP40189 918 aaPredicted RBP13.08□□□□□ -0.32
SCAMP3-206ENST00000478737 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
SCAMP3-206ENST00000478737 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
SCAMP3-206ENST00000478737 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
SCAMP3-206ENST00000478737 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
SCAMP3-206ENST00000478737 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
SCAMP3-206ENST00000478737 APAF1O14727 1248 aa13.07□□□□□ -0.32
SCAMP3-206ENST00000478737 A1BGP04217 495 aa13.07□□□□□ -0.32
SCAMP3-206ENST00000478737 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
SCAMP3-206ENST00000478737 TJP1Q07157 1748 aa13.07□□□□□ -0.32
SCAMP3-206ENST00000478737 A0A087WZG4 1122 aa13.06□□□□□ -0.32
SCAMP3-206ENST00000478737 MMP10P09238 476 aa13.06□□□□□ -0.32
SCAMP3-206ENST00000478737 TM4SF1P30408 202 aa13.06□□□□□ -0.32
SCAMP3-206ENST00000478737 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
SCAMP3-206ENST00000478737 SRP68Q9UHB9 627 aaKnown RBP13.06□□□□□ -0.32
SCAMP3-206ENST00000478737 LAMB4A4D0S4 1761 aa13.05□□□□□ -0.32
SCAMP3-206ENST00000478737 NBPF26B4DH59 902 aa13.05□□□□□ -0.32
SCAMP3-206ENST00000478737 ZPR1O75312 459 aa13.05□□□□□ -0.32
SCAMP3-206ENST00000478737 FKBP8Q14318 412 aa13.05□□□□□ -0.32
SCAMP3-206ENST00000478737 NBPF10Q6P3W6 841 aaKnown RBP13.05□□□□□ -0.32
SCAMP3-206ENST00000478737 NBPF15Q8N660 670 aa13.05□□□□□ -0.32
SCAMP3-206ENST00000478737 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
SCAMP3-206ENST00000478737 COL15A1P39059 1388 aa13.05□□□□□ -0.32
SCAMP3-206ENST00000478737 RGL2O15211 777 aa13.04□□□□□ -0.32
SCAMP3-206ENST00000478737 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
SCAMP3-206ENST00000478737 CCDC27Q2M243 656 aa13.04□□□□□ -0.32
SCAMP3-206ENST00000478737 USPL1Q5W0Q7 1092 aa13.04□□□□□ -0.32
SCAMP3-206ENST00000478737 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
SCAMP3-206ENST00000478737 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
SCAMP3-206ENST00000478737 TSPYL4Q9UJ04 414 aa13.04□□□□□ -0.32
SCAMP3-206ENST00000478737 NLGN2Q8NFZ4 835 aa13.03□□□□□ -0.32
SCAMP3-206ENST00000478737 DDR1Q08345 913 aa13.02□□□□□ -0.33
SCAMP3-206ENST00000478737 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 NFIXQ14938 502 aa13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 ERBB4Q15303 1308 aa13.01□□□□□ -0.33
SCAMP3-206ENST00000478737 DCAF8L1A6NGE4 600 aa13□□□□□ -0.33
SCAMP3-206ENST00000478737 TGFB2P61812 414 aa13□□□□□ -0.33
SCAMP3-206ENST00000478737 IFT57Q9NWB7 429 aa13□□□□□ -0.33
SCAMP3-206ENST00000478737 HOXB7P09629 217 aa12.99□□□□□ -0.33
SCAMP3-206ENST00000478737 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
SCAMP3-206ENST00000478737 PDIA6Q15084 440 aa12.99□□□□□ -0.33
SCAMP3-206ENST00000478737 LRP10Q7Z4F1 713 aa12.99□□□□□ -0.33
SCAMP3-206ENST00000478737 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
SCAMP3-206ENST00000478737 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
SCAMP3-206ENST00000478737 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
SCAMP3-206ENST00000478737 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
SCAMP3-206ENST00000478737 GNAI1P63096 354 aa12.98□□□□□ -0.33
SCAMP3-206ENST00000478737 NGEFQ8N5V2 710 aa12.98□□□□□ -0.33
SCAMP3-206ENST00000478737 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
SCAMP3-206ENST00000478737 C10orf71Q711Q0 1435 aa12.97□□□□□ -0.33
SCAMP3-206ENST00000478737 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
SCAMP3-206ENST00000478737 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
SCAMP3-206ENST00000478737 SERPINB2P05120 415 aa12.97□□□□□ -0.33
SCAMP3-206ENST00000478737 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
SCAMP3-206ENST00000478737 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
SCAMP3-206ENST00000478737 KCNA3P22001 575 aa12.96□□□□□ -0.33
SCAMP3-206ENST00000478737 GPR162Q16538 588 aa12.96□□□□□ -0.33
SCAMP3-206ENST00000478737 KRT24Q2M2I5 525 aa12.96□□□□□ -0.33
SCAMP3-206ENST00000478737 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
SCAMP3-206ENST00000478737 C4AP0C0L4 1744 aa12.96□□□□□ -0.34
SCAMP3-206ENST00000478737 IL16Q14005 1332 aa12.95□□□□□ -0.34
SCAMP3-206ENST00000478737 GRIN3BO60391 1043 aa12.95□□□□□ -0.34
SCAMP3-206ENST00000478737 YBX3P16989 372 aaKnown RBP eCLIP12.95□□□□□ -0.348e-7■■■□□ 16.9
SCAMP3-206ENST00000478737 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
SCAMP3-206ENST00000478737 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
SCAMP3-206ENST00000478737 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
SCAMP3-206ENST00000478737 DPEP1P16444 411 aa12.94□□□□□ -0.34
SCAMP3-206ENST00000478737 EIF2S2P20042 333 aaKnown RBP12.94□□□□□ -0.34
SCAMP3-206ENST00000478737 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
SCAMP3-206ENST00000478737 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
SCAMP3-206ENST00000478737 DDX21Q9NR30 783 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCAMP3-206ENST00000478737 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
SCAMP3-206ENST00000478737 PXDNLA1KZ92 1463 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms