RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 USP16Q9Y5T5 823 aa21.76■■□□□ 1.07
EPHB4-204ENST00000477446 TEX13AQ9BXU3 409 aaPredicted RBP21.75■■□□□ 1.07
EPHB4-204ENST00000477446 ELL2O00472 640 aaPredicted RBP21.74■■□□□ 1.07
EPHB4-204ENST00000477446 EXOSC9Q06265 439 aaKnown RBP21.74■■□□□ 1.07
EPHB4-204ENST00000477446 DUSP27Q5VZP5 1158 aa21.74■■□□□ 1.07
EPHB4-204ENST00000477446 LAMB4A4D0S4 1761 aa21.74■■□□□ 1.07
EPHB4-204ENST00000477446 CYP19A1P11511 503 aaPredicted RBP21.74■■□□□ 1.07
EPHB4-204ENST00000477446 TSPYL6Q8N831 410 aa21.74■■□□□ 1.07
EPHB4-204ENST00000477446 C4BP0C0L5 1744 aa21.73■■□□□ 1.07
EPHB4-204ENST00000477446 STARD3NLO95772 234 aa21.72■■□□□ 1.07
EPHB4-204ENST00000477446 MYH14Q7Z406 1995 aaKnown RBP21.72■■□□□ 1.07
EPHB4-204ENST00000477446 HOXB7P09629 217 aa21.71■■□□□ 1.07
EPHB4-204ENST00000477446 HMGB2P26583 209 aaKnown RBP21.71■■□□□ 1.07
EPHB4-204ENST00000477446 CRKLP46109 303 aaKnown RBP21.71■■□□□ 1.07
EPHB4-204ENST00000477446 TWISTNBQ3B726 338 aaPredicted RBP21.7■■□□□ 1.06
EPHB4-204ENST00000477446 EIF2S2P20042 333 aaKnown RBP21.7■■□□□ 1.06
EPHB4-204ENST00000477446 CNTNAP4Q9C0A0 1308 aa21.69■■□□□ 1.06
EPHB4-204ENST00000477446 A1BGP04217 495 aa21.69■■□□□ 1.06
EPHB4-204ENST00000477446 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
EPHB4-204ENST00000477446 RC3H1Q5TC82 1133 aaKnown RBP21.69■■□□□ 1.06
EPHB4-204ENST00000477446 INTS5Q6P9B9 1019 aaKnown RBP21.69■■□□□ 1.06
EPHB4-204ENST00000477446 AKT1S1Q96B36 256 aa21.69■■□□□ 1.06
EPHB4-204ENST00000477446 ANO8Q9HCE9 1232 aaPredicted RBP21.69■■□□□ 1.06
EPHB4-204ENST00000477446 NECTIN2Q92692 538 aa21.68■■□□□ 1.06
EPHB4-204ENST00000477446 CCDC87Q9NVE4 849 aa21.68■■□□□ 1.06
EPHB4-204ENST00000477446 SOS1Q07889 1333 aaPredicted RBP21.68■■□□□ 1.06
EPHB4-204ENST00000477446 VAMP4O75379 141 aa21.67■■□□□ 1.06
EPHB4-204ENST00000477446 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
EPHB4-204ENST00000477446 AK7Q96M32 723 aa21.67■■□□□ 1.06
EPHB4-204ENST00000477446 HDGFL1Q5TGJ6 251 aa21.66■■□□□ 1.06
EPHB4-204ENST00000477446 NBPF14Q5TI25 921 aa21.66■■□□□ 1.06
EPHB4-204ENST00000477446 ZBTB1Q9Y2K1 713 aa21.66■■□□□ 1.06
EPHB4-204ENST00000477446 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
EPHB4-204ENST00000477446 GNPATO15228 680 aa21.65■■□□□ 1.06
EPHB4-204ENST00000477446 CANXP27824 592 aaKnown RBP21.65■■□□□ 1.06
EPHB4-204ENST00000477446 PIP4K2AP48426 406 aaPredicted RBP21.65■■□□□ 1.06
EPHB4-204ENST00000477446 SLC15A2Q16348 729 aa21.65■■□□□ 1.06
EPHB4-204ENST00000477446 STK32BQ9NY57 414 aa21.65■■□□□ 1.06
EPHB4-204ENST00000477446 TUBGCP6Q96RT7 1819 aa21.65■■□□□ 1.06
EPHB4-204ENST00000477446 RCAN3Q9UKA8 241 aa21.65■■□□□ 1.06
EPHB4-204ENST00000477446 NBPF26B4DH59 902 aa21.64■■□□□ 1.05
EPHB4-204ENST00000477446 RPS6KA4O75676 772 aa21.64■■□□□ 1.05
EPHB4-204ENST00000477446 NBPF10Q6P3W6 841 aaKnown RBP21.64■■□□□ 1.05
EPHB4-204ENST00000477446 AMIGO3Q86WK7 504 aa21.64■■□□□ 1.05
EPHB4-204ENST00000477446 NBPF15Q8N660 670 aa21.64■■□□□ 1.05
EPHB4-204ENST00000477446 TFCP2L1Q9NZI6 479 aa21.64■■□□□ 1.05
EPHB4-204ENST00000477446 SMIM5Q71RC9 77 aa21.63■■□□□ 1.05
EPHB4-204ENST00000477446 ERBB4Q15303 1308 aa21.62■■□□□ 1.05
EPHB4-204ENST00000477446 PDIA6Q15084 440 aa21.62■■□□□ 1.05
EPHB4-204ENST00000477446 CCDC30Q5VVM6 783 aa21.62■■□□□ 1.05
EPHB4-204ENST00000477446 RTCBQ9Y3I0 505 aaKnown RBP21.62■■□□□ 1.05
EPHB4-204ENST00000477446 CHMP4AQ9BY43 222 aa21.61■■□□□ 1.05
EPHB4-204ENST00000477446 CHPF2Q9P2E5 772 aa21.61■■□□□ 1.05
EPHB4-204ENST00000477446 TCERG1O14776 1098 aaKnown RBP21.61■■□□□ 1.05
EPHB4-204ENST00000477446 MYL6BP14649 208 aa21.61■■□□□ 1.05
EPHB4-204ENST00000477446 IL6STP40189 918 aaPredicted RBP21.61■■□□□ 1.05
EPHB4-204ENST00000477446 PROSER3Q2NL68 480 aa21.61■■□□□ 1.05
EPHB4-204ENST00000477446 DBF4Q9UBU7 674 aaPredicted RBP21.61■■□□□ 1.05
EPHB4-204ENST00000477446 QSER1Q2KHR3 1735 aa21.6■■□□□ 1.05
EPHB4-204ENST00000477446 PHF14O94880 888 aa21.6■■□□□ 1.05
EPHB4-204ENST00000477446 ANXA1P04083 346 aa21.6■■□□□ 1.05
EPHB4-204ENST00000477446 EIF5P55010 431 aaKnown RBP21.6■■□□□ 1.05
EPHB4-204ENST00000477446 DDX21Q9NR30 783 aaKnown RBP eCLIP21.6■■□□□ 1.05
EPHB4-204ENST00000477446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.59■■□□□ 1.05
EPHB4-204ENST00000477446 CT47B1P0C2W7 299 aaPredicted RBP21.59■■□□□ 1.05
EPHB4-204ENST00000477446 SSFA2P28290 1259 aa21.59■■□□□ 1.05
EPHB4-204ENST00000477446 ZNF330Q9Y3S2 320 aaPredicted RBP21.59■■□□□ 1.05
EPHB4-204ENST00000477446 PNPLA7Q6ZV29 1317 aa21.59■■□□□ 1.05
EPHB4-204ENST00000477446 RRP1P56182 461 aaKnown RBP21.58■■□□□ 1.05
EPHB4-204ENST00000477446 LRP10Q7Z4F1 713 aa21.58■■□□□ 1.05
EPHB4-204ENST00000477446 TRAPPC3LQ5T215 181 aa21.57■■□□□ 1.04
EPHB4-204ENST00000477446 STK31Q9BXU1 1019 aa21.57■■□□□ 1.04
EPHB4-204ENST00000477446 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
EPHB4-204ENST00000477446 COL15A1P39059 1388 aa21.57■■□□□ 1.04
EPHB4-204ENST00000477446 CACNA1FO60840 1977 aa21.57■■□□□ 1.04
EPHB4-204ENST00000477446 R3HDM1Q15032 1099 aaKnown RBP21.57■■□□□ 1.04
EPHB4-204ENST00000477446 ARHGEF1Q92888 912 aaKnown RBP21.57■■□□□ 1.04
EPHB4-204ENST00000477446 ZNF428Q96B54 188 aa21.57■■□□□ 1.04
EPHB4-204ENST00000477446 C4AP0C0L4 1744 aa21.56■■□□□ 1.04
EPHB4-204ENST00000477446 SLC4A2P04920 1241 aa21.56■■□□□ 1.04
EPHB4-204ENST00000477446 ADRA2BP18089 450 aa21.56■■□□□ 1.04
EPHB4-204ENST00000477446 COL23A1Q86Y22 540 aaPredicted RBP21.56■■□□□ 1.04
EPHB4-204ENST00000477446 FLAD1Q8NFF5 587 aa21.56■■□□□ 1.04
EPHB4-204ENST00000477446 HYPKQ9NX55 129 aa21.56■■□□□ 1.04
EPHB4-204ENST00000477446 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
EPHB4-204ENST00000477446 PSDA5PKW4 1024 aaPredicted RBP21.54■■□□□ 1.04
EPHB4-204ENST00000477446 PHAXQ9H814 394 aaKnown RBP21.54■■□□□ 1.04
EPHB4-204ENST00000477446 A0A087WZG4 1122 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 RFC4P35249 363 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 SSH1Q8WYL5 1049 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 ARXQ96QS3 562 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 PDGFDQ9GZP0 370 aaPredicted RBP21.53■■□□□ 1.04
EPHB4-204ENST00000477446 TBC1D2BQ9UPU7 963 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 MSH5O43196 834 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 RARSP54136 660 aaKnown RBP21.53■■□□□ 1.04
EPHB4-204ENST00000477446 ALDH1L2Q3SY69 923 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 COPS6Q7L5N1 327 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 DZIP3Q86Y13 1208 aaKnown RBP21.53■■□□□ 1.04
EPHB4-204ENST00000477446 XAGE3Q8WTP9 111 aa21.53■■□□□ 1.04
EPHB4-204ENST00000477446 BCL2L13Q9BXK5 485 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms