RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 MBIPQ9NS73 344 aa38.46■■■■□ 3.75
HOXB3-208ENST00000476342 CCDC87Q9NVE4 849 aa38.46■■■■□ 3.75
HOXB3-208ENST00000476342 RTCBQ9Y3I0 505 aaKnown RBP38.46■■■■□ 3.75
HOXB3-208ENST00000476342 SSFA2P28290 1259 aa38.46■■■■□ 3.75
HOXB3-208ENST00000476342 GIGYF1O75420 1035 aaPredicted RBP38.45■■■■□ 3.75
HOXB3-208ENST00000476342 PRAMEF22A3QJZ6 481 aa38.43■■■■□ 3.74
HOXB3-208ENST00000476342 RPS6KA4O75676 772 aa38.43■■■■□ 3.74
HOXB3-208ENST00000476342 INTS5Q6P9B9 1019 aaKnown RBP38.43■■■■□ 3.74
HOXB3-208ENST00000476342 USP16Q9Y5T5 823 aa38.43■■■■□ 3.74
HOXB3-208ENST00000476342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.42■■■■□ 3.74
HOXB3-208ENST00000476342 PHF14O94880 888 aa38.42■■■■□ 3.74
HOXB3-208ENST00000476342 ADRA2BP18089 450 aa38.39■■■■□ 3.74
HOXB3-208ENST00000476342 ZBTB1Q9Y2K1 713 aa38.39■■■■□ 3.74
HOXB3-208ENST00000476342 MSH5O43196 834 aa38.38■■■■□ 3.74
HOXB3-208ENST00000476342 AMIGO3Q86WK7 504 aa38.38■■■■□ 3.74
HOXB3-208ENST00000476342 COL23A1Q86Y22 540 aaPredicted RBP38.38■■■■□ 3.74
HOXB3-208ENST00000476342 PDGFDQ9GZP0 370 aaPredicted RBP38.38■■■■□ 3.74
HOXB3-208ENST00000476342 ZNF521Q96K83 1311 aa38.38■■■■□ 3.73
HOXB3-208ENST00000476342 TRAPPC3LQ5T215 181 aa38.38■■■■□ 3.73
HOXB3-208ENST00000476342 SLC16A10Q8TF71 515 aa38.36■■■■□ 3.73
HOXB3-208ENST00000476342 CANXP27824 592 aaKnown RBP38.35■■■■□ 3.73
HOXB3-208ENST00000476342 A1BGP04217 495 aa38.34■■■■□ 3.73
HOXB3-208ENST00000476342 TSR2Q969E8 191 aaKnown RBP38.34■■■■□ 3.73
HOXB3-208ENST00000476342 SOS1Q07889 1333 aaPredicted RBP38.34■■■■□ 3.73
HOXB3-208ENST00000476342 HOXB7P09629 217 aa38.33■■■■□ 3.73
HOXB3-208ENST00000476342 SMIM5Q71RC9 77 aa38.33■■■■□ 3.73
HOXB3-208ENST00000476342 KRT24Q2M2I5 525 aa38.32■■■■□ 3.73
HOXB3-208ENST00000476342 C4AP0C0L4 1744 aa38.32■■■■□ 3.72
HOXB3-208ENST00000476342 NPM2Q86SE8 214 aaKnown RBP38.31■■■■□ 3.72
HOXB3-208ENST00000476342 COL15A1P39059 1388 aa38.31■■■■□ 3.72
HOXB3-208ENST00000476342 IL6STP40189 918 aaPredicted RBP38.3■■■■□ 3.72
HOXB3-208ENST00000476342 MTFR1LQ9H019 292 aa38.3■■■■□ 3.72
HOXB3-208ENST00000476342 MYH16Q9H6N6 1097 aa38.3■■■■□ 3.72
HOXB3-208ENST00000476342 RFC4P35249 363 aa38.29■■■■□ 3.72
HOXB3-208ENST00000476342 ARHGEF1Q92888 912 aaKnown RBP38.29■■■■□ 3.72
HOXB3-208ENST00000476342 FANCIQ9NVI1 1328 aa38.29■■■■□ 3.72
HOXB3-208ENST00000476342 ZBTB7AO95365 584 aa38.29■■■■□ 3.72
HOXB3-208ENST00000476342 GOLGA2Q08379 1002 aa38.29■■■■□ 3.72
HOXB3-208ENST00000476342 DUSP27Q5VZP5 1158 aa38.29■■■■□ 3.72
HOXB3-208ENST00000476342 EIF2S2P20042 333 aaKnown RBP38.28■■■■□ 3.72
HOXB3-208ENST00000476342 EIF5P55010 431 aaKnown RBP38.28■■■■□ 3.72
HOXB3-208ENST00000476342 HNRNPUQ00839 825 aaKnown RBP eCLIP38.28■■■■□ 3.72
HOXB3-208ENST00000476342 ERBB4Q15303 1308 aa38.27■■■■□ 3.72
HOXB3-208ENST00000476342 ZNF330Q9Y3S2 320 aaPredicted RBP38.27■■■■□ 3.72
HOXB3-208ENST00000476342 SPINK5Q9NQ38 1064 aaPredicted RBP38.26■■■■□ 3.72
HOXB3-208ENST00000476342 A0A087WZG4 1122 aa38.25■■■■□ 3.71
HOXB3-208ENST00000476342 SPON1Q9HCB6 807 aa38.25■■■■□ 3.71
HOXB3-208ENST00000476342 PIP4K2AP48426 406 aaPredicted RBP38.24■■■■□ 3.71
HOXB3-208ENST00000476342 HDGFL1Q5TGJ6 251 aa38.23■■■■□ 3.71
HOXB3-208ENST00000476342 NBPF26B4DH59 902 aa38.22■■■■□ 3.71
HOXB3-208ENST00000476342 E9PSI1 815 aa38.22■■■■□ 3.71
HOXB3-208ENST00000476342 NBPF10Q6P3W6 841 aaKnown RBP38.22■■■■□ 3.71
HOXB3-208ENST00000476342 NBPF15Q8N660 670 aa38.22■■■■□ 3.71
HOXB3-208ENST00000476342 C8orf58Q8NAV2 365 aa38.22■■■■□ 3.71
HOXB3-208ENST00000476342 ELL2O00472 640 aaPredicted RBP38.21■■■■□ 3.71
HOXB3-208ENST00000476342 CHMP4AQ9BY43 222 aa38.21■■■■□ 3.71
HOXB3-208ENST00000476342 USP42Q9H9J4 1324 aaKnown RBP38.21■■■■□ 3.71
HOXB3-208ENST00000476342 ZPR1O75312 459 aa38.21■■■■□ 3.71
HOXB3-208ENST00000476342 ATF5Q9Y2D1 282 aaPredicted RBP38.21■■■■□ 3.71
HOXB3-208ENST00000476342 LRP5O75197 1615 aa38.2■■■■□ 3.71
HOXB3-208ENST00000476342 COL24A1Q17RW2 1714 aa38.19■■■■□ 3.7
HOXB3-208ENST00000476342 NECTIN2Q92692 538 aa38.19■■■■□ 3.7
HOXB3-208ENST00000476342 NARFQ9UHQ1 456 aa38.19■■■■□ 3.7
HOXB3-208ENST00000476342 TWISTNBQ3B726 338 aaPredicted RBP38.17■■■■□ 3.7
HOXB3-208ENST00000476342 TSPYL6Q8N831 410 aa38.17■■■■□ 3.7
HOXB3-208ENST00000476342 MYL6BP14649 208 aa38.16■■■■□ 3.7
HOXB3-208ENST00000476342 SRP68Q9UHB9 627 aaKnown RBP38.16■■■■□ 3.7
HOXB3-208ENST00000476342 SLFN5Q08AF3 891 aa38.15■■■■□ 3.7
HOXB3-208ENST00000476342 MSL1Q68DK7 614 aa38.15■■■■□ 3.7
HOXB3-208ENST00000476342 ARXQ96QS3 562 aa38.15■■■■□ 3.7
HOXB3-208ENST00000476342 GYS1P13807 737 aa38.14■■■■□ 3.7
HOXB3-208ENST00000476342 EXOSC9Q06265 439 aaKnown RBP38.14■■■■□ 3.7
HOXB3-208ENST00000476342 DZIP3Q86Y13 1208 aaKnown RBP38.14■■■■□ 3.7
HOXB3-208ENST00000476342 POLD1P28340 1107 aa38.13■■■■□ 3.7
HOXB3-208ENST00000476342 USPL1Q5W0Q7 1092 aa38.13■■■■□ 3.7
HOXB3-208ENST00000476342 NLGN1Q8N2Q7 840 aa38.13■■■■□ 3.7
HOXB3-208ENST00000476342 DDX21Q9NR30 783 aaKnown RBP eCLIP38.13■■■■□ 3.7
HOXB3-208ENST00000476342 SCN7AQ01118 1682 aa38.13■■■■□ 3.7
HOXB3-208ENST00000476342 PDIA6Q15084 440 aa38.12■■■■□ 3.69
HOXB3-208ENST00000476342 CHPF2Q9P2E5 772 aa38.12■■■■□ 3.69
HOXB3-208ENST00000476342 DBF4Q9UBU7 674 aaPredicted RBP38.12■■■■□ 3.69
HOXB3-208ENST00000476342 TBC1D2BQ9UPU7 963 aa38.12■■■■□ 3.69
HOXB3-208ENST00000476342 CCDC30Q5VVM6 783 aa38.12■■■■□ 3.69
HOXB3-208ENST00000476342 CDCA7LQ96GN5 454 aa38.12■■■■□ 3.69
HOXB3-208ENST00000476342 BCORQ6W2J9 1755 aa38.11■■■■□ 3.69
HOXB3-208ENST00000476342 PTGER2P43116 358 aa38.1■■■■□ 3.69
HOXB3-208ENST00000476342 ZBED9Q6R2W3 1325 aa38.09■■■■□ 3.69
HOXB3-208ENST00000476342 PROSER3Q2NL68 480 aa38.09■■■■□ 3.69
HOXB3-208ENST00000476342 SGIP1Q9BQI5 828 aa38.09■■■■□ 3.69
HOXB3-208ENST00000476342 SRCAPQ6ZRS2 3230 aa38.09■■■■□ 3.69
HOXB3-208ENST00000476342 ANXA1P04083 346 aa38.08■■■■□ 3.69
HOXB3-208ENST00000476342 CAMTA2O94983 1202 aa38.06■■■■□ 3.68
HOXB3-208ENST00000476342 KIF6Q6ZMV9 814 aa38.06■■■■□ 3.68
HOXB3-208ENST00000476342 LRP10Q7Z4F1 713 aa38.06■■■■□ 3.68
HOXB3-208ENST00000476342 FKBP8Q14318 412 aa38.05■■■■□ 3.68
HOXB3-208ENST00000476342 HYPKQ9NX55 129 aa38.05■■■■□ 3.68
HOXB3-208ENST00000476342 VAMP4O75379 141 aa38.04■■■■□ 3.68
HOXB3-208ENST00000476342 TRMT2AQ8IZ69 625 aaKnown RBP38.04■■■■□ 3.68
HOXB3-208ENST00000476342 STK31Q9BXU1 1019 aa38.04■■■■□ 3.68
HOXB3-208ENST00000476342 BCL2L12Q9HB09 334 aa38.04■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms