RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 MTFR1LQ9H019 292 aa10.49□□□□□ -0.73
HPS1-210ENST00000474873 SPON1Q9HCB6 807 aa10.49□□□□□ -0.73
HPS1-210ENST00000474873 CCDC87Q9NVE4 849 aa10.49□□□□□ -0.73
HPS1-210ENST00000474873 TSPYL4Q9UJ04 414 aa10.49□□□□□ -0.73
HPS1-210ENST00000474873 COL5A3P25940 1745 aaPredicted RBP10.48□□□□□ -0.73
HPS1-210ENST00000474873 QSER1Q2KHR3 1735 aa10.48□□□□□ -0.73
HPS1-210ENST00000474873 MSH5O43196 834 aa10.48□□□□□ -0.73
HPS1-210ENST00000474873 ZBTB7AO95365 584 aa10.48□□□□□ -0.73
HPS1-210ENST00000474873 AMIGO3Q86WK7 504 aa10.48□□□□□ -0.73
HPS1-210ENST00000474873 TJP1Q07157 1748 aa10.47□□□□□ -0.73
HPS1-210ENST00000474873 CASZ1Q86V15 1759 aa10.47□□□□□ -0.73
HPS1-210ENST00000474873 GIGYF1O75420 1035 aaPredicted RBP10.47□□□□□ -0.73
HPS1-210ENST00000474873 PHF14O94880 888 aa10.47□□□□□ -0.73
HPS1-210ENST00000474873 ZNF853P0CG23 659 aa10.47□□□□□ -0.73
HPS1-210ENST00000474873 GNAI1P63096 354 aa10.47□□□□□ -0.73
HPS1-210ENST00000474873 WWC1Q8IX03 1113 aa10.47□□□□□ -0.73
HPS1-210ENST00000474873 IFT57Q9NWB7 429 aa10.47□□□□□ -0.73
HPS1-210ENST00000474873 USP16Q9Y5T5 823 aa10.47□□□□□ -0.73
HPS1-210ENST00000474873 MYH14Q7Z406 1995 aaKnown RBP10.46□□□□□ -0.73
HPS1-210ENST00000474873 RFC4P35249 363 aa10.46□□□□□ -0.73
HPS1-210ENST00000474873 SMIM5Q71RC9 77 aa10.46□□□□□ -0.73
HPS1-210ENST00000474873 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
HPS1-210ENST00000474873 ATF5Q9Y2D1 282 aaPredicted RBP10.46□□□□□ -0.73
HPS1-210ENST00000474873 LAS1LQ9Y4W2 734 aaKnown RBP10.46□□□□□ -0.73
HPS1-210ENST00000474873 UBR3Q6ZT12 1888 aa10.46□□□□□ -0.74
HPS1-210ENST00000474873 TUBGCP6Q96RT7 1819 aa10.45□□□□□ -0.74
HPS1-210ENST00000474873 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
HPS1-210ENST00000474873 SOS1Q07889 1333 aaPredicted RBP10.45□□□□□ -0.74
HPS1-210ENST00000474873 IL16Q14005 1332 aa10.45□□□□□ -0.74
HPS1-210ENST00000474873 PRAMEF22A3QJZ6 481 aa10.45□□□□□ -0.74
HPS1-210ENST00000474873 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
HPS1-210ENST00000474873 IL6STP40189 918 aaPredicted RBP10.45□□□□□ -0.74
HPS1-210ENST00000474873 EIF5P55010 431 aaKnown RBP10.45□□□□□ -0.74
HPS1-210ENST00000474873 WDR63Q8IWG1 891 aa10.45□□□□□ -0.74
HPS1-210ENST00000474873 ZBTB1Q9Y2K1 713 aa10.45□□□□□ -0.74
HPS1-210ENST00000474873 A0A087WZG4 1122 aa10.44□□□□□ -0.74
HPS1-210ENST00000474873 A1BGP04217 495 aa10.44□□□□□ -0.74
HPS1-210ENST00000474873 PTGER2P43116 358 aa10.44□□□□□ -0.74
HPS1-210ENST00000474873 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
HPS1-210ENST00000474873 SGIP1Q9BQI5 828 aa10.44□□□□□ -0.74
HPS1-210ENST00000474873 MBIPQ9NS73 344 aa10.44□□□□□ -0.74
HPS1-210ENST00000474873 PCDH10Q9P2E7 1040 aa10.44□□□□□ -0.74
HPS1-210ENST00000474873 ZPR1O75312 459 aa10.43□□□□□ -0.74
HPS1-210ENST00000474873 HOXB7P09629 217 aa10.43□□□□□ -0.74
HPS1-210ENST00000474873 POLD1P28340 1107 aa10.43□□□□□ -0.74
HPS1-210ENST00000474873 NLGN1Q8N2Q7 840 aa10.43□□□□□ -0.74
HPS1-210ENST00000474873 SALL2Q9Y467 1007 aaPredicted RBP10.43□□□□□ -0.74
HPS1-210ENST00000474873 COL15A1P39059 1388 aa10.42□□□□□ -0.74
HPS1-210ENST00000474873 ERBB4Q15303 1308 aa10.42□□□□□ -0.74
HPS1-210ENST00000474873 USP42Q9H9J4 1324 aaKnown RBP10.42□□□□□ -0.74
HPS1-210ENST00000474873 DCAF8L1A6NGE4 600 aa10.42□□□□□ -0.74
HPS1-210ENST00000474873 NBPF26B4DH59 902 aa10.42□□□□□ -0.74
HPS1-210ENST00000474873 GYS1P13807 737 aa10.42□□□□□ -0.74
HPS1-210ENST00000474873 NBPF10Q6P3W6 841 aaKnown RBP10.42□□□□□ -0.74
HPS1-210ENST00000474873 NBPF15Q8N660 670 aa10.42□□□□□ -0.74
HPS1-210ENST00000474873 PPP1R1BQ9UD71 204 aaPredicted RBP10.42□□□□□ -0.74
HPS1-210ENST00000474873 NARFQ9UHQ1 456 aa10.42□□□□□ -0.74
HPS1-210ENST00000474873 DUSP27Q5VZP5 1158 aa10.41□□□□□ -0.74
HPS1-210ENST00000474873 MSL1Q68DK7 614 aa10.41□□□□□ -0.74
HPS1-210ENST00000474873 ARXQ96QS3 562 aa10.41□□□□□ -0.74
HPS1-210ENST00000474873 CHMP4AQ9BY43 222 aa10.41□□□□□ -0.74
HPS1-210ENST00000474873 SRP68Q9UHB9 627 aaKnown RBP10.41□□□□□ -0.74
HPS1-210ENST00000474873 ZNF521Q96K83 1311 aa10.4□□□□□ -0.74
HPS1-210ENST00000474873 EIF2S2P20042 333 aaKnown RBP10.4□□□□□ -0.74
HPS1-210ENST00000474873 KRT24Q2M2I5 525 aa10.4□□□□□ -0.74
HPS1-210ENST00000474873 USPL1Q5W0Q7 1092 aa10.4□□□□□ -0.74
HPS1-210ENST00000474873 TBC1D2BQ9UPU7 963 aa10.4□□□□□ -0.74
HPS1-210ENST00000474873 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.74
HPS1-210ENST00000474873 COL24A1Q17RW2 1714 aa10.4□□□□□ -0.74
HPS1-210ENST00000474873 UTRNP46939 3433 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 CHD4Q14839 1912 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 RGL2O15211 777 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 MMP10P09238 476 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 PIP4K2AP48426 406 aaPredicted RBP10.39□□□□□ -0.75
HPS1-210ENST00000474873 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 FKBP8Q14318 412 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 PDIA6Q15084 440 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 HDGFL1Q5TGJ6 251 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 C8orf58Q8NAV2 365 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 TSR2Q969E8 191 aaKnown RBP10.39□□□□□ -0.75
HPS1-210ENST00000474873 MYH16Q9H6N6 1097 aa10.39□□□□□ -0.75
HPS1-210ENST00000474873 CAMTA2O94983 1202 aa10.38□□□□□ -0.75
HPS1-210ENST00000474873 TM4SF1P30408 202 aa10.38□□□□□ -0.75
HPS1-210ENST00000474873 CLEC4GQ6UXB4 293 aa10.38□□□□□ -0.75
HPS1-210ENST00000474873 DZIP3Q86Y13 1208 aaKnown RBP10.38□□□□□ -0.75
HPS1-210ENST00000474873 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
HPS1-210ENST00000474873 DDX21Q9NR30 783 aaKnown RBP eCLIP10.38□□□□□ -0.75
HPS1-210ENST00000474873 DBF4Q9UBU7 674 aaPredicted RBP10.38□□□□□ -0.75
HPS1-210ENST00000474873 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
HPS1-210ENST00000474873 FANCIQ9NVI1 1328 aa10.37□□□□□ -0.75
HPS1-210ENST00000474873 ERVV-1B6SEH8 477 aa10.37□□□□□ -0.75
HPS1-210ENST00000474873 ELL2O00472 640 aaPredicted RBP10.37□□□□□ -0.75
HPS1-210ENST00000474873 CAPN15O75808 1086 aa10.37□□□□□ -0.75
HPS1-210ENST00000474873 C4AP0C0L4 1744 aa10.37□□□□□ -0.75
HPS1-210ENST00000474873 MYL6BP14649 208 aa10.37□□□□□ -0.75
HPS1-210ENST00000474873 LRP10Q7Z4F1 713 aa10.37□□□□□ -0.75
HPS1-210ENST00000474873 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
HPS1-210ENST00000474873 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
HPS1-210ENST00000474873 SPINK5Q9NQ38 1064 aaPredicted RBP10.37□□□□□ -0.75
HPS1-210ENST00000474873 E9PSI1 815 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms