RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 PRAMEF22A3QJZ6 481 aa23.81■■□□□ 1.4
EFNA1-204ENST00000474413 KIF13BQ9NQT8 1826 aa23.81■■□□□ 1.4
EFNA1-204ENST00000474413 COL15A1P39059 1388 aa23.8■■□□□ 1.4
EFNA1-204ENST00000474413 TMPOP42166 694 aaKnown RBP23.8■■□□□ 1.4
EFNA1-204ENST00000474413 MIS18AQ9NYP9 233 aa23.8■■□□□ 1.4
EFNA1-204ENST00000474413 FMNL2Q96PY5 1086 aa23.79■■□□□ 1.4
EFNA1-204ENST00000474413 RRP7AQ9Y3A4 280 aaKnown RBP23.79■■□□□ 1.4
EFNA1-204ENST00000474413 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.4
EFNA1-204ENST00000474413 PNNQ9H307 717 aaKnown RBP23.78■■□□□ 1.4
EFNA1-204ENST00000474413 NEFMP07197 916 aa23.77■■□□□ 1.4
EFNA1-204ENST00000474413 MMP10P09238 476 aa23.77■■□□□ 1.4
EFNA1-204ENST00000474413 TAF7Q15545 349 aaPredicted RBP23.77■■□□□ 1.4
EFNA1-204ENST00000474413 BCORQ6W2J9 1755 aa23.77■■□□□ 1.4
EFNA1-204ENST00000474413 RIPK4P57078 832 aa23.76■■□□□ 1.39
EFNA1-204ENST00000474413 RUNDC1Q96C34 613 aa23.76■■□□□ 1.39
EFNA1-204ENST00000474413 C10orf71Q711Q0 1435 aa23.76■■□□□ 1.39
EFNA1-204ENST00000474413 RFC4P35249 363 aa23.75■■□□□ 1.39
EFNA1-204ENST00000474413 FKBP8Q14318 412 aa23.75■■□□□ 1.39
EFNA1-204ENST00000474413 KLHL34Q8N239 644 aa23.75■■□□□ 1.39
EFNA1-204ENST00000474413 TRIM35Q9UPQ4 493 aa23.75■■□□□ 1.39
EFNA1-204ENST00000474413 USP16Q9Y5T5 823 aa23.75■■□□□ 1.39
EFNA1-204ENST00000474413 EIF5P55010 431 aaKnown RBP23.74■■□□□ 1.39
EFNA1-204ENST00000474413 BCL2L12Q9HB09 334 aa23.74■■□□□ 1.39
EFNA1-204ENST00000474413 NRXN2Q9P2S2 1712 aa23.73■■□□□ 1.39
EFNA1-204ENST00000474413 STARD3NLO95772 234 aa23.73■■□□□ 1.39
EFNA1-204ENST00000474413 A1BGP04217 495 aa23.73■■□□□ 1.39
EFNA1-204ENST00000474413 CANXP27824 592 aaKnown RBP23.73■■□□□ 1.39
EFNA1-204ENST00000474413 DDR1Q08345 913 aa23.73■■□□□ 1.39
EFNA1-204ENST00000474413 PIP4K2AP48426 406 aaPredicted RBP23.71■■□□□ 1.39
EFNA1-204ENST00000474413 USPL1Q5W0Q7 1092 aa23.71■■□□□ 1.39
EFNA1-204ENST00000474413 NLGN1Q8N2Q7 840 aa23.71■■□□□ 1.39
EFNA1-204ENST00000474413 PXDNLA1KZ92 1463 aa23.7■■□□□ 1.38
EFNA1-204ENST00000474413 EIF4A1P60842 406 aaKnown RBP23.7■■□□□ 1.38
EFNA1-204ENST00000474413 TEX13AQ9BXU3 409 aaPredicted RBP23.7■■□□□ 1.38
EFNA1-204ENST00000474413 NARFQ9UHQ1 456 aa23.7■■□□□ 1.38
EFNA1-204ENST00000474413 CD2APQ9Y5K6 639 aa23.7■■□□□ 1.38
EFNA1-204ENST00000474413 AFDNP55196 1824 aaKnown RBP23.7■■□□□ 1.38
EFNA1-204ENST00000474413 NBPF26B4DH59 902 aa23.69■■□□□ 1.38
EFNA1-204ENST00000474413 SNRPA1P09661 255 aaKnown RBP23.69■■□□□ 1.38
EFNA1-204ENST00000474413 NBPF10Q6P3W6 841 aaKnown RBP23.69■■□□□ 1.38
EFNA1-204ENST00000474413 NBPF15Q8N660 670 aa23.69■■□□□ 1.38
EFNA1-204ENST00000474413 N4BP2Q86UW6 1770 aaPredicted RBP23.68■■□□□ 1.38
EFNA1-204ENST00000474413 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
EFNA1-204ENST00000474413 BRCA1P38398 1863 aaKnown RBP23.67■■□□□ 1.38
EFNA1-204ENST00000474413 TM4SF1P30408 202 aa23.67■■□□□ 1.38
EFNA1-204ENST00000474413 IL6STP40189 918 aaPredicted RBP23.67■■□□□ 1.38
EFNA1-204ENST00000474413 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
EFNA1-204ENST00000474413 POLRMTO00411 1230 aaKnown RBP23.66■■□□□ 1.38
EFNA1-204ENST00000474413 GIGYF1O75420 1035 aaPredicted RBP23.66■■□□□ 1.38
EFNA1-204ENST00000474413 LMOD3Q0VAK6 560 aa23.66■■□□□ 1.38
EFNA1-204ENST00000474413 APAF1O14727 1248 aa23.65■■□□□ 1.38
EFNA1-204ENST00000474413 ANP32CO43423 234 aa23.65■■□□□ 1.38
EFNA1-204ENST00000474413 YBX3P16989 372 aaKnown RBP eCLIP23.65■■□□□ 1.384e-11■■■■□ 20.7
EFNA1-204ENST00000474413 NFIXQ14938 502 aa23.64■■□□□ 1.37
EFNA1-204ENST00000474413 TSPYL4Q9UJ04 414 aa23.64■■□□□ 1.37
EFNA1-204ENST00000474413 ZPR1O75312 459 aa23.63■■□□□ 1.37
EFNA1-204ENST00000474413 CAMTA2O94983 1202 aa23.63■■□□□ 1.37
EFNA1-204ENST00000474413 TBC1D2BQ9UPU7 963 aa23.63■■□□□ 1.37
EFNA1-204ENST00000474413 MRS2Q9HD23 443 aa23.62■■□□□ 1.37
EFNA1-204ENST00000474413 ZNF330Q9Y3S2 320 aaPredicted RBP23.62■■□□□ 1.37
EFNA1-204ENST00000474413 CARMIL3Q8ND23 1372 aa23.62■■□□□ 1.37
EFNA1-204ENST00000474413 CHL1O00533 1208 aa23.61■■□□□ 1.37
EFNA1-204ENST00000474413 KRT24Q2M2I5 525 aa23.61■■□□□ 1.37
EFNA1-204ENST00000474413 ANKRD31Q8N7Z5 1873 aa23.6■■□□□ 1.37
EFNA1-204ENST00000474413 BABAM1Q9NWV8 329 aa23.6■■□□□ 1.37
EFNA1-204ENST00000474413 PARP3Q9Y6F1 533 aa23.6■■□□□ 1.37
EFNA1-204ENST00000474413 A0A087WZG4 1122 aa23.59■■□□□ 1.37
EFNA1-204ENST00000474413 SENP3-EIF4A1A0A087X0R7 540 aa23.59■■□□□ 1.37
EFNA1-204ENST00000474413 TBC1D9BQ66K14 1250 aa23.59■■□□□ 1.37
EFNA1-204ENST00000474413 DLEC1Q9Y238 1755 aa23.59■■□□□ 1.37
EFNA1-204ENST00000474413 LRP10Q7Z4F1 713 aa23.58■■□□□ 1.37
EFNA1-204ENST00000474413 DZIP3Q86Y13 1208 aaKnown RBP23.58■■□□□ 1.37
EFNA1-204ENST00000474413 WWC3Q9ULE0 1092 aa23.58■■□□□ 1.37
EFNA1-204ENST00000474413 COL11A2P13942 1736 aaPredicted RBP23.58■■□□□ 1.37
EFNA1-204ENST00000474413 ZNF853P0CG23 659 aa23.57■■□□□ 1.36
EFNA1-204ENST00000474413 CHD4Q14839 1912 aa23.56■■□□□ 1.36
EFNA1-204ENST00000474413 KCNA3P22001 575 aa23.55■■□□□ 1.36
EFNA1-204ENST00000474413 PDIA6Q15084 440 aa23.55■■□□□ 1.36
EFNA1-204ENST00000474413 GPR162Q16538 588 aa23.55■■□□□ 1.36
EFNA1-204ENST00000474413 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
EFNA1-204ENST00000474413 A0A0G2JLW4 131 aa23.54■■□□□ 1.36
EFNA1-204ENST00000474413 PROSER3Q2NL68 480 aa23.54■■□□□ 1.36
EFNA1-204ENST00000474413 BICDL1Q6ZP65 573 aa23.54■■□□□ 1.36
EFNA1-204ENST00000474413 DPEP1P16444 411 aa23.53■■□□□ 1.36
EFNA1-204ENST00000474413 TGFB2P61812 414 aa23.53■■□□□ 1.36
EFNA1-204ENST00000474413 CFAP44Q96MT7 982 aa23.53■■□□□ 1.36
EFNA1-204ENST00000474413 MBIPQ9NS73 344 aa23.53■■□□□ 1.36
EFNA1-204ENST00000474413 SERPINB2P05120 415 aa23.52■■□□□ 1.36
EFNA1-204ENST00000474413 LAS1LQ9Y4W2 734 aaKnown RBP23.52■■□□□ 1.36
EFNA1-204ENST00000474413 NUP98P52948 1817 aa23.52■■□□□ 1.36
EFNA1-204ENST00000474413 TTLL7Q6ZT98 887 aa23.51■■□□□ 1.35
EFNA1-204ENST00000474413 ARFGEF1Q9Y6D6 1849 aa23.51■■□□□ 1.35
EFNA1-204ENST00000474413 ERBB4Q15303 1308 aa23.51■■□□□ 1.35
EFNA1-204ENST00000474413 DCAF8L1A6NGE4 600 aa23.5■■□□□ 1.35
EFNA1-204ENST00000474413 HLFQ16534 295 aa23.5■■□□□ 1.35
EFNA1-204ENST00000474413 TNRC6CQ9HCJ0 1690 aaKnown RBP23.49■■□□□ 1.35
EFNA1-204ENST00000474413 ANXA1P04083 346 aa23.49■■□□□ 1.35
EFNA1-204ENST00000474413 MYL6BP14649 208 aa23.49■■□□□ 1.35
EFNA1-204ENST00000474413 CHRNA5P30532 468 aa23.49■■□□□ 1.35
EFNA1-204ENST00000474413 PRR5LQ6MZQ0 368 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms