RNA–Protein interactions for RNA: ENST00000474317.1

SPATA13-210, Transcript of spermatogenesis associated 13, human

TSL 2

Gene SPATA13, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPATA13-210	ENST00000474317	HOXB7	P09629	217 aa		13.7	□□□□□ -0.22
SPATA13-210	ENST00000474317	CHMP4A	Q9BY43	222 aa		13.7	□□□□□ -0.22
SPATA13-210	ENST00000474317	LAMB4	A4D0S4	1761 aa		13.7	□□□□□ -0.22
SPATA13-210	ENST00000474317	CASZ1	Q86V15	1759 aa		13.7	□□□□□ -0.22
SPATA13-210	ENST00000474317	UBR3	Q6ZT12	1888 aa		13.7	□□□□□ -0.22
SPATA13-210	ENST00000474317	SOS1	Q07889	1333 aa	Predicted RBP	13.69	□□□□□ -0.22
SPATA13-210	ENST00000474317	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.69	□□□□□ -0.22
SPATA13-210	ENST00000474317	MBIP	Q9NS73	344 aa		13.69	□□□□□ -0.22
SPATA13-210	ENST00000474317	TUBGCP6	Q96RT7	1819 aa		13.69	□□□□□ -0.22
SPATA13-210	ENST00000474317	ERBB4	Q15303	1308 aa		13.68	□□□□□ -0.22
SPATA13-210	ENST00000474317	IL6ST	P40189	918 aa	Predicted RBP	13.68	□□□□□ -0.22
SPATA13-210	ENST00000474317	TRAPPC3L	Q5T215	181 aa		13.68	□□□□□ -0.22
SPATA13-210	ENST00000474317	INTS5	Q6P9B9	1019 aa	Known RBP	13.68	□□□□□ -0.22
SPATA13-210	ENST00000474317	NPM2	Q86SE8	214 aa	Known RBP	13.68	□□□□□ -0.22
SPATA13-210	ENST00000474317	SALL2	Q9Y467	1007 aa	Predicted RBP	13.68	□□□□□ -0.22
SPATA13-210	ENST00000474317	ZNF521	Q96K83	1311 aa		13.67	□□□□□ -0.22
SPATA13-210	ENST00000474317		A0A087WZG4	1122 aa		13.67	□□□□□ -0.22
SPATA13-210	ENST00000474317	COL23A1	Q86Y22	540 aa	Predicted RBP	13.67	□□□□□ -0.22
SPATA13-210	ENST00000474317	MTFR1L	Q9H019	292 aa		13.67	□□□□□ -0.22
SPATA13-210	ENST00000474317	MYH16	Q9H6N6	1097 aa		13.67	□□□□□ -0.22
SPATA13-210	ENST00000474317	ZBTB1	Q9Y2K1	713 aa		13.67	□□□□□ -0.22
SPATA13-210	ENST00000474317	USP16	Q9Y5T5	823 aa		13.67	□□□□□ -0.22
SPATA13-210	ENST00000474317	MSH5	O43196	834 aa		13.66	□□□□□ -0.22
SPATA13-210	ENST00000474317	PHF14	O94880	888 aa		13.66	□□□□□ -0.22
SPATA13-210	ENST00000474317	SPON1	Q9HCB6	807 aa		13.66	□□□□□ -0.22
SPATA13-210	ENST00000474317	COL15A1	P39059	1388 aa		13.66	□□□□□ -0.22
SPATA13-210	ENST00000474317	MYH14	Q7Z406	1995 aa	Known RBP	13.65	□□□□□ -0.22
SPATA13-210	ENST00000474317	RFC4	P35249	363 aa		13.65	□□□□□ -0.22
SPATA13-210	ENST00000474317	EIF5	P55010	431 aa	Known RBP	13.65	□□□□□ -0.22
SPATA13-210	ENST00000474317	GOLGA2	Q08379	1002 aa		13.65	□□□□□ -0.22
SPATA13-210	ENST00000474317	PRAMEF22	A3QJZ6	481 aa		13.64	□□□□□ -0.23
SPATA13-210	ENST00000474317	CANX	P27824	592 aa	Known RBP	13.64	□□□□□ -0.23
SPATA13-210	ENST00000474317	ARHGEF1	Q92888	912 aa	Known RBP	13.64	□□□□□ -0.23
SPATA13-210	ENST00000474317	LRP5	O75197	1615 aa		13.64	□□□□□ -0.23
SPATA13-210	ENST00000474317	SENP3-EIF4A1	A0A087X0R7	540 aa		13.63	□□□□□ -0.23
SPATA13-210	ENST00000474317		E9PSI1	815 aa		13.63	□□□□□ -0.23
SPATA13-210	ENST00000474317	RGL2	O15211	777 aa		13.63	□□□□□ -0.23
SPATA13-210	ENST00000474317	A1BG	P04217	495 aa		13.63	□□□□□ -0.23
SPATA13-210	ENST00000474317	DUSP27	Q5VZP5	1158 aa		13.63	□□□□□ -0.23
SPATA13-210	ENST00000474317	AMIGO3	Q86WK7	504 aa		13.63	□□□□□ -0.23
SPATA13-210	ENST00000474317	USP42	Q9H9J4	1324 aa	Known RBP	13.63	□□□□□ -0.23
SPATA13-210	ENST00000474317	FANCI	Q9NVI1	1328 aa		13.63	□□□□□ -0.23
SPATA13-210	ENST00000474317	ZPR1	O75312	459 aa		13.62	□□□□□ -0.23
SPATA13-210	ENST00000474317	ZBTB7A	O95365	584 aa		13.62	□□□□□ -0.23
SPATA13-210	ENST00000474317	POLD1	P28340	1107 aa		13.62	□□□□□ -0.23
SPATA13-210	ENST00000474317	HDGFL1	Q5TGJ6	251 aa		13.62	□□□□□ -0.23
SPATA13-210	ENST00000474317	NLGN1	Q8N2Q7	840 aa		13.62	□□□□□ -0.23
SPATA13-210	ENST00000474317	TSR2	Q969E8	191 aa	Known RBP	13.62	□□□□□ -0.23
SPATA13-210	ENST00000474317	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.62	□□□□□ -0.23
SPATA13-210	ENST00000474317	NARF	Q9UHQ1	456 aa		13.62	□□□□□ -0.23
SPATA13-210	ENST00000474317	C4A	P0C0L4	1744 aa		13.61	□□□□□ -0.23
SPATA13-210	ENST00000474317	COL24A1	Q17RW2	1714 aa		13.61	□□□□□ -0.23
SPATA13-210	ENST00000474317	EIF2S2	P20042	333 aa	Known RBP	13.61	□□□□□ -0.23
SPATA13-210	ENST00000474317	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SPATA13-210	ENST00000474317	NBPF26	B4DH59	902 aa		13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	KRT24	Q2M2I5	525 aa		13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	TWISTNB	Q3B726	338 aa	Predicted RBP	13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	CCDC30	Q5VVM6	783 aa		13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	NBPF10	Q6P3W6	841 aa	Known RBP	13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	NBPF15	Q8N660	670 aa		13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	DBF4	Q9UBU7	674 aa	Predicted RBP	13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.6	□□□□□ -0.23
SPATA13-210	ENST00000474317	GYS1	P13807	737 aa		13.59	□□□□□ -0.23
SPATA13-210	ENST00000474317	SLFN5	Q08AF3	891 aa		13.59	□□□□□ -0.23
SPATA13-210	ENST00000474317	DZIP3	Q86Y13	1208 aa	Known RBP	13.59	□□□□□ -0.23
SPATA13-210	ENST00000474317	C8orf58	Q8NAV2	365 aa		13.59	□□□□□ -0.23
SPATA13-210	ENST00000474317	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.59	□□□□□ -0.23
SPATA13-210	ENST00000474317	ZNF652	Q9Y2D9	606 aa		13.59	□□□□□ -0.23
SPATA13-210	ENST00000474317	SCN7A	Q01118	1682 aa		13.59	□□□□□ -0.23
SPATA13-210	ENST00000474317	USPL1	Q5W0Q7	1092 aa		13.58	□□□□□ -0.24
SPATA13-210	ENST00000474317	CLEC4G	Q6UXB4	293 aa		13.58	□□□□□ -0.24
SPATA13-210	ENST00000474317	KIF6	Q6ZMV9	814 aa		13.58	□□□□□ -0.24
SPATA13-210	ENST00000474317	SMIM5	Q71RC9	77 aa		13.58	□□□□□ -0.24
SPATA13-210	ENST00000474317	SGIP1	Q9BQI5	828 aa		13.58	□□□□□ -0.24
SPATA13-210	ENST00000474317	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.58	□□□□□ -0.24
SPATA13-210	ENST00000474317	HYPK	Q9NX55	129 aa		13.58	□□□□□ -0.24
SPATA13-210	ENST00000474317	ZBED9	Q6R2W3	1325 aa		13.58	□□□□□ -0.24
SPATA13-210	ENST00000474317	ERVV-1	B6SEH8	477 aa		13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	ELL2	O00472	640 aa	Predicted RBP	13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	MYL6B	P14649	208 aa		13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	PTGER2	P43116	358 aa		13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	EXOSC9	Q06265	439 aa	Known RBP	13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	PDIA6	Q15084	440 aa		13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	STK31	Q9BXU1	1019 aa		13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	TBC1D2B	Q9UPU7	963 aa		13.57	□□□□□ -0.24
SPATA13-210	ENST00000474317	BCOR	Q6W2J9	1755 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	CAMTA2	O94983	1202 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	CT47B1	P0C2W7	299 aa	Predicted RBP	13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	PIP4K2A	P48426	406 aa	Predicted RBP	13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	MSL1	Q68DK7	614 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	LRP10	Q7Z4F1	713 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	TSPYL6	Q8N831	410 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	NECTIN2	Q92692	538 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	ZNF428	Q96B54	188 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	ARX	Q96QS3	562 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	CHPF2	Q9P2E5	772 aa		13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	SRP68	Q9UHB9	627 aa	Known RBP	13.56	□□□□□ -0.24
SPATA13-210	ENST00000474317	TRMT2A	Q8IZ69	625 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms