RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SLC10A4Q96EP9 437 aa6.52□□□□□ -1.36
TMEM39A-206ENST00000473684 FER1L4A9Z1Z3 1794 aa6.52□□□□□ -1.36
TMEM39A-206ENST00000473684 GOLGA6L3A6NEY3 463 aa6.52□□□□□ -1.37
TMEM39A-206ENST00000473684 SWI5Q1ZZU3 235 aa6.52□□□□□ -1.37
TMEM39A-206ENST00000473684 OXLD1Q5BKU9 147 aa6.52□□□□□ -1.37
TMEM39A-206ENST00000473684 ZNF594Q96JF6 807 aaPredicted RBP6.52□□□□□ -1.37
TMEM39A-206ENST00000473684 KIAA1024Q9UPX6 916 aa6.52□□□□□ -1.37
TMEM39A-206ENST00000473684 PREX1Q8TCU6 1659 aa6.52□□□□□ -1.37
TMEM39A-206ENST00000473684 ISY1Q9ULR0 285 aaKnown RBP6.52□□□□□ -1.37
TMEM39A-206ENST00000473684 ZNF142P52746 1687 aaPredicted RBP6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 XRCC6P12956 609 aaKnown RBP eCLIP6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 NBPF20Q3BBV1 942 aa6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 KIAA1211Q6ZU35 1233 aa6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 CDAN1Q8IWY9 1227 aa6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 GTF2IP78347 998 aa6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 IRX3P78415 501 aaPredicted RBP6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 TRIM44Q96DX7 344 aaPredicted RBP6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 PCDH10Q9P2E7 1040 aa6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 CDV3Q9UKY7 258 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 FRMPD1Q5SYB0 1578 aa6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 ARHGEF40Q8TER5 1519 aa6.51□□□□□ -1.37
TMEM39A-206ENST00000473684 PPEF1O14829 653 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 CDK11BP21127 795 aaKnown RBP6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 SEPT12Q8IYM1 358 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 POGKQ9P215 609 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 PCDHGA11Q9Y5H2 935 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 CCDC27Q2M243 656 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 CCDC125Q86Z20 511 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 VPS8Q8N3P4 1428 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 HECW2Q9P2P5 1572 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 ATP2B4P23634 1241 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 ARID4AP29374 1257 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 MRE11P49959 708 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 SLC20A2Q08357 652 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 FOXD4L5Q5VV16 416 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 FOXD4L4Q8WXT5 416 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 SIN3AQ96ST3 1273 aa6.5□□□□□ -1.37
TMEM39A-206ENST00000473684 ZSCAN20P17040 1043 aaPredicted RBP6.49□□□□□ -1.37
TMEM39A-206ENST00000473684 RIPK4P57078 832 aa6.49□□□□□ -1.37
TMEM39A-206ENST00000473684 PCDHB11Q9Y5F2 797 aa6.49□□□□□ -1.37
TMEM39A-206ENST00000473684 NEO1Q92859 1461 aa6.49□□□□□ -1.37
TMEM39A-206ENST00000473684 OFD1O75665 1012 aa6.49□□□□□ -1.37
TMEM39A-206ENST00000473684 SIRT1Q96EB6 747 aa6.49□□□□□ -1.37
TMEM39A-206ENST00000473684 GOLGA3Q08378 1498 aa6.49□□□□□ -1.37
TMEM39A-206ENST00000473684 ITGBL1O95965 494 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 USP4Q13107 963 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 CCDC102BQ68D86 513 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 RNF223E7ERA6 249 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 CLGNO14967 610 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 MMP14P50281 582 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 SEC13P55735 322 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 TRIM32Q13049 653 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 PLA2G2CQ5R387 149 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 MYH16Q9H6N6 1097 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 DISP1Q96F81 1524 aa6.48□□□□□ -1.37
TMEM39A-206ENST00000473684 ZBTB24O43167 697 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 KCNC4Q03721 635 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 ANKLE1Q8NAG6 615 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 C1orf216Q8TAB5 229 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 KCTD15Q96SI1 283 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 CCDC94Q9BW85 323 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 NUDCQ9Y266 331 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 VARSP26640 1264 aaKnown RBP6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 DNTTIP2Q5QJE6 756 aaKnown RBP6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 MAGI2Q86UL8 1455 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 SFI1A8K8P3 1242 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 VGLL3A8MV65 326 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 DYNC1I1O14576 645 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 WNT7BP56706 349 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 SKOR1P84550 965 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 POTEGQ6S5H5 508 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 TPCN2Q8NHX9 752 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 MAP4K5Q9Y4K4 846 aa6.47□□□□□ -1.37
TMEM39A-206ENST00000473684 AKNAQ7Z591 1439 aa6.46□□□□□ -1.37
TMEM39A-206ENST00000473684 OCLNQ16625 522 aa6.46□□□□□ -1.38
TMEM39A-206ENST00000473684 FAM13BQ9NYF5 915 aa6.46□□□□□ -1.38
TMEM39A-206ENST00000473684 AXDND1Q5T1B0 1012 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-206ENST00000473684 ERBB4Q15303 1308 aa6.46□□□□□ -1.38
TMEM39A-206ENST00000473684 CLIP1P30622 1438 aa6.46□□□□□ -1.38
TMEM39A-206ENST00000473684 RRBP1Q9P2E9 1410 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-206ENST00000473684 PRMT3O60678 531 aa6.45□□□□□ -1.38
TMEM39A-206ENST00000473684 PTMSP20962 102 aa6.45□□□□□ -1.38
TMEM39A-206ENST00000473684 SCNN1AP37088 669 aa6.45□□□□□ -1.38
TMEM39A-206ENST00000473684 PSME1Q06323 249 aa6.45□□□□□ -1.38
TMEM39A-206ENST00000473684 PRG4Q92954 1404 aaPredicted RBP6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 INTS6LQ5JSJ4 861 aaKnown RBP6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 DNAJC2Q99543 621 aaKnown RBP6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 CXXC1Q9P0U4 656 aaPredicted RBP6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 HCSTQ9UBK5 93 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 ADGRL1O94910 1474 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 SOWAHDA6NJG2 315 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 SERPINB4P48594 390 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 RAB15P59190 212 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 VASH1Q7L8A9 365 aaPredicted RBP6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 TAS1R3Q7RTX0 852 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 ZNF428Q96B54 188 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 PANK2Q9BZ23 570 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 PRDM10Q9NQV6 1147 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 ERVH48-1M5A8F1 160 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms