RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
TPM3-216ENST00000473036 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
TPM3-216ENST00000473036 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
TPM3-216ENST00000473036 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
TPM3-216ENST00000473036 ADCY9O60503 1353 aa17.28■□□□□ 0.36
TPM3-216ENST00000473036 INTS5Q6P9B9 1019 aaKnown RBP17.28■□□□□ 0.36
TPM3-216ENST00000473036 GPBP1L1Q9HC44 474 aaPredicted RBP17.28■□□□□ 0.36
TPM3-216ENST00000473036 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
TPM3-216ENST00000473036 CYP19A1P11511 503 aaPredicted RBP17.27■□□□□ 0.36
TPM3-216ENST00000473036 CNTNAP4Q9C0A0 1308 aa17.26■□□□□ 0.35
TPM3-216ENST00000473036 CRKLP46109 303 aaKnown RBP17.26■□□□□ 0.35
TPM3-216ENST00000473036 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
TPM3-216ENST00000473036 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
TPM3-216ENST00000473036 AK7Q96M32 723 aa17.26■□□□□ 0.35
TPM3-216ENST00000473036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
TPM3-216ENST00000473036 GNPATO15228 680 aa17.25■□□□□ 0.35
TPM3-216ENST00000473036 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
TPM3-216ENST00000473036 TTC5Q8N0Z6 440 aa17.25■□□□□ 0.35
TPM3-216ENST00000473036 MIER1Q8N108 512 aa17.25■□□□□ 0.35
TPM3-216ENST00000473036 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
TPM3-216ENST00000473036 PHF14O94880 888 aa17.24■□□□□ 0.35
TPM3-216ENST00000473036 HSPA6P17066 643 aa17.24■□□□□ 0.35
TPM3-216ENST00000473036 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
TPM3-216ENST00000473036 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
TPM3-216ENST00000473036 MSL1Q68DK7 614 aa17.23■□□□□ 0.35
TPM3-216ENST00000473036 ZBTB1Q9Y2K1 713 aa17.23■□□□□ 0.35
TPM3-216ENST00000473036 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
TPM3-216ENST00000473036 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
TPM3-216ENST00000473036 SSFA2P28290 1259 aa17.22■□□□□ 0.35
TPM3-216ENST00000473036 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
TPM3-216ENST00000473036 CHL1O00533 1208 aa17.21■□□□□ 0.35
TPM3-216ENST00000473036 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
TPM3-216ENST00000473036 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
TPM3-216ENST00000473036 CCDC87Q9NVE4 849 aa17.21■□□□□ 0.35
TPM3-216ENST00000473036 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.34
TPM3-216ENST00000473036 A1BGP04217 495 aa17.2■□□□□ 0.34
TPM3-216ENST00000473036 ZNF853P0CG23 659 aa17.2■□□□□ 0.34
TPM3-216ENST00000473036 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
TPM3-216ENST00000473036 TSPYL4Q9UJ04 414 aa17.2■□□□□ 0.34
TPM3-216ENST00000473036 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
TPM3-216ENST00000473036 PIP4K2AP48426 406 aaPredicted RBP17.19■□□□□ 0.34
TPM3-216ENST00000473036 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
TPM3-216ENST00000473036 SNRPA1P09661 255 aaKnown RBP17.18■□□□□ 0.34
TPM3-216ENST00000473036 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
TPM3-216ENST00000473036 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
TPM3-216ENST00000473036 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
TPM3-216ENST00000473036 SRP68Q9UHB9 627 aaKnown RBP17.18■□□□□ 0.34
TPM3-216ENST00000473036 NBPF26B4DH59 902 aa17.17■□□□□ 0.34
TPM3-216ENST00000473036 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
TPM3-216ENST00000473036 CCDC27Q2M243 656 aa17.17■□□□□ 0.34
TPM3-216ENST00000473036 NBPF10Q6P3W6 841 aaKnown RBP17.17■□□□□ 0.34
TPM3-216ENST00000473036 NBPF15Q8N660 670 aa17.17■□□□□ 0.34
TPM3-216ENST00000473036 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
TPM3-216ENST00000473036 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
TPM3-216ENST00000473036 STARD3NLO95772 234 aa17.16■□□□□ 0.34
TPM3-216ENST00000473036 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
TPM3-216ENST00000473036 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
TPM3-216ENST00000473036 TEX13AQ9BXU3 409 aaPredicted RBP17.16■□□□□ 0.34
TPM3-216ENST00000473036 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
TPM3-216ENST00000473036 GYS1P13807 737 aa17.15■□□□□ 0.34
TPM3-216ENST00000473036 ADRA2BP18089 450 aa17.15■□□□□ 0.34
TPM3-216ENST00000473036 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
TPM3-216ENST00000473036 COL15A1P39059 1388 aa17.15■□□□□ 0.34
TPM3-216ENST00000473036 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
TPM3-216ENST00000473036 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
TPM3-216ENST00000473036 USP42Q9H9J4 1324 aaKnown RBP17.14■□□□□ 0.33
TPM3-216ENST00000473036 APLP1P51693 650 aa17.13■□□□□ 0.33
TPM3-216ENST00000473036 TGFB2P61812 414 aa17.13■□□□□ 0.33
TPM3-216ENST00000473036 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
TPM3-216ENST00000473036 KIF3CO14782 793 aa17.12■□□□□ 0.33
TPM3-216ENST00000473036 RFC4P35249 363 aa17.12■□□□□ 0.33
TPM3-216ENST00000473036 IL6STP40189 918 aaPredicted RBP17.12■□□□□ 0.33
TPM3-216ENST00000473036 FKBP8Q14318 412 aa17.12■□□□□ 0.33
TPM3-216ENST00000473036 PDIA6Q15084 440 aa17.11■□□□□ 0.33
TPM3-216ENST00000473036 USPL1Q5W0Q7 1092 aa17.11■□□□□ 0.33
TPM3-216ENST00000473036 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
TPM3-216ENST00000473036 ZNF526Q8TF50 670 aaPredicted RBP17.11■□□□□ 0.33
TPM3-216ENST00000473036 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
TPM3-216ENST00000473036 NARFQ9UHQ1 456 aa17.11■□□□□ 0.33
TPM3-216ENST00000473036 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
TPM3-216ENST00000473036 TOMM70O94826 608 aa17.1■□□□□ 0.33
TPM3-216ENST00000473036 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
TPM3-216ENST00000473036 NLGN1Q8N2Q7 840 aa17.1■□□□□ 0.33
TPM3-216ENST00000473036 TBC1D2BQ9UPU7 963 aa17.1■□□□□ 0.33
TPM3-216ENST00000473036 SCN7AQ01118 1682 aa17.1■□□□□ 0.33
TPM3-216ENST00000473036 BCORQ6W2J9 1755 aa17.1■□□□□ 0.33
TPM3-216ENST00000473036 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
TPM3-216ENST00000473036 GNAI1P63096 354 aa17.09■□□□□ 0.33
TPM3-216ENST00000473036 C8orf58Q8NAV2 365 aa17.09■□□□□ 0.33
TPM3-216ENST00000473036 ANXA1P04083 346 aa17.08■□□□□ 0.32
TPM3-216ENST00000473036 EIF2S2P20042 333 aaKnown RBP17.08■□□□□ 0.32
TPM3-216ENST00000473036 DDR1Q08345 913 aa17.08■□□□□ 0.32
TPM3-216ENST00000473036 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
TPM3-216ENST00000473036 NECTIN2Q92692 538 aa17.08■□□□□ 0.32
TPM3-216ENST00000473036 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.32
TPM3-216ENST00000473036 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
TPM3-216ENST00000473036 IL16Q14005 1332 aa17.07■□□□□ 0.32
TPM3-216ENST00000473036 CAMTA2O94983 1202 aa17.07■□□□□ 0.32
TPM3-216ENST00000473036 MMP10P09238 476 aa17.07■□□□□ 0.32
TPM3-216ENST00000473036 TM4SF1P30408 202 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms