RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CCDC87Q9NVE4 849 aa25.94■■□□□ 1.74
SF1-213ENST00000472725 RPS6KA4O75676 772 aa25.93■■□□□ 1.74
SF1-213ENST00000472725 ADRA2BP18089 450 aa25.93■■□□□ 1.74
SF1-213ENST00000472725 SSFA2P28290 1259 aa25.93■■□□□ 1.74
SF1-213ENST00000472725 GOLGA2Q08379 1002 aa25.93■■□□□ 1.74
SF1-213ENST00000472725 CHMP4AQ9BY43 222 aa25.93■■□□□ 1.74
SF1-213ENST00000472725 R3HDM1Q15032 1099 aaKnown RBP25.92■■□□□ 1.74
SF1-213ENST00000472725 RTCBQ9Y3I0 505 aaKnown RBP25.92■■□□□ 1.74
SF1-213ENST00000472725 TUBGCP6Q96RT7 1819 aa25.92■■□□□ 1.74
SF1-213ENST00000472725 GNPATO15228 680 aa25.91■■□□□ 1.74
SF1-213ENST00000472725 INTS5Q6P9B9 1019 aaKnown RBP25.91■■□□□ 1.74
SF1-213ENST00000472725 USP16Q9Y5T5 823 aa25.91■■□□□ 1.74
SF1-213ENST00000472725 E9PSI1 815 aa25.9■■□□□ 1.74
SF1-213ENST00000472725 HNRNPUQ00839 825 aaKnown RBP eCLIP25.9■■□□□ 1.74
SF1-213ENST00000472725 ERBB4Q15303 1308 aa25.89■■□□□ 1.74
SF1-213ENST00000472725 PNPLA7Q6ZV29 1317 aa25.88■■□□□ 1.73
SF1-213ENST00000472725 SLC16A10Q8TF71 515 aa25.88■■□□□ 1.73
SF1-213ENST00000472725 FANCIQ9NVI1 1328 aa25.88■■□□□ 1.73
SF1-213ENST00000472725 PRAMEF22A3QJZ6 481 aa25.87■■□□□ 1.73
SF1-213ENST00000472725 CASZ1Q86V15 1759 aa25.87■■□□□ 1.73
SF1-213ENST00000472725 IL6STP40189 918 aaPredicted RBP25.86■■□□□ 1.73
SF1-213ENST00000472725 TRAPPC3LQ5T215 181 aa25.86■■□□□ 1.73
SF1-213ENST00000472725 DUSP27Q5VZP5 1158 aa25.86■■□□□ 1.73
SF1-213ENST00000472725 TSR2Q969E8 191 aaKnown RBP25.86■■□□□ 1.73
SF1-213ENST00000472725 ZBTB1Q9Y2K1 713 aa25.86■■□□□ 1.73
SF1-213ENST00000472725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.85■■□□□ 1.73
SF1-213ENST00000472725 PSDA5PKW4 1024 aaPredicted RBP25.84■■□□□ 1.73
SF1-213ENST00000472725 SLFN5Q08AF3 891 aa25.84■■□□□ 1.73
SF1-213ENST00000472725 SPINK5Q9NQ38 1064 aaPredicted RBP25.84■■□□□ 1.73
SF1-213ENST00000472725 ZBED9Q6R2W3 1325 aa25.84■■□□□ 1.73
SF1-213ENST00000472725 A0A087WZG4 1122 aa25.83■■□□□ 1.73
SF1-213ENST00000472725 A1BGP04217 495 aa25.83■■□□□ 1.73
SF1-213ENST00000472725 EIF5P55010 431 aaKnown RBP25.83■■□□□ 1.73
SF1-213ENST00000472725 NPM2Q86SE8 214 aaKnown RBP25.83■■□□□ 1.73
SF1-213ENST00000472725 COL23A1Q86Y22 540 aaPredicted RBP25.83■■□□□ 1.73
SF1-213ENST00000472725 CANXP27824 592 aaKnown RBP25.82■■□□□ 1.72
SF1-213ENST00000472725 KRT24Q2M2I5 525 aa25.82■■□□□ 1.72
SF1-213ENST00000472725 C8orf58Q8NAV2 365 aa25.82■■□□□ 1.72
SF1-213ENST00000472725 TRMT2AQ8IZ69 625 aaKnown RBP25.81■■□□□ 1.72
SF1-213ENST00000472725 ARHGEF1Q92888 912 aaKnown RBP25.81■■□□□ 1.72
SF1-213ENST00000472725 COL15A1P39059 1388 aa25.81■■□□□ 1.72
SF1-213ENST00000472725 PHF14O94880 888 aa25.8■■□□□ 1.72
SF1-213ENST00000472725 RFC4P35249 363 aa25.8■■□□□ 1.72
SF1-213ENST00000472725 HDGFL1Q5TGJ6 251 aa25.8■■□□□ 1.72
SF1-213ENST00000472725 AMIGO3Q86WK7 504 aa25.8■■□□□ 1.72
SF1-213ENST00000472725 C4AP0C0L4 1744 aa25.8■■□□□ 1.72
SF1-213ENST00000472725 EIF2S2P20042 333 aaKnown RBP25.79■■□□□ 1.72
SF1-213ENST00000472725 TWISTNBQ3B726 338 aaPredicted RBP25.79■■□□□ 1.72
SF1-213ENST00000472725 NBPF26B4DH59 902 aa25.78■■□□□ 1.72
SF1-213ENST00000472725 NBPF10Q6P3W6 841 aaKnown RBP25.78■■□□□ 1.72
SF1-213ENST00000472725 NBPF15Q8N660 670 aa25.78■■□□□ 1.72
SF1-213ENST00000472725 MTFR1LQ9H019 292 aa25.78■■□□□ 1.72
SF1-213ENST00000472725 DBF4Q9UBU7 674 aaPredicted RBP25.78■■□□□ 1.72
SF1-213ENST00000472725 RGL2O15211 777 aa25.77■■□□□ 1.72
SF1-213ENST00000472725 MSH5O43196 834 aa25.77■■□□□ 1.72
SF1-213ENST00000472725 EXOSC9Q06265 439 aaKnown RBP25.77■■□□□ 1.72
SF1-213ENST00000472725 CCDC30Q5VVM6 783 aa25.77■■□□□ 1.72
SF1-213ENST00000472725 DDX21Q9NR30 783 aaKnown RBP eCLIP25.77■■□□□ 1.72
SF1-213ENST00000472725 ELL2O00472 640 aaPredicted RBP25.76■■□□□ 1.71
SF1-213ENST00000472725 TSPYL6Q8N831 410 aa25.76■■□□□ 1.71
SF1-213ENST00000472725 NARFQ9UHQ1 456 aa25.76■■□□□ 1.71
SF1-213ENST00000472725 CACNA1FO60840 1977 aa25.76■■□□□ 1.71
SF1-213ENST00000472725 COL24A1Q17RW2 1714 aa25.75■■□□□ 1.71
SF1-213ENST00000472725 USP42Q9H9J4 1324 aaKnown RBP25.75■■□□□ 1.71
SF1-213ENST00000472725 CDCA7LQ96GN5 454 aa25.75■■□□□ 1.71
SF1-213ENST00000472725 ZPR1O75312 459 aa25.74■■□□□ 1.71
SF1-213ENST00000472725 VAMP4O75379 141 aa25.74■■□□□ 1.71
SF1-213ENST00000472725 PDIA6Q15084 440 aa25.74■■□□□ 1.71
SF1-213ENST00000472725 ZNF428Q96B54 188 aa25.74■■□□□ 1.71
SF1-213ENST00000472725 PDGFDQ9GZP0 370 aaPredicted RBP25.74■■□□□ 1.71
SF1-213ENST00000472725 CT47B1P0C2W7 299 aaPredicted RBP25.73■■□□□ 1.71
SF1-213ENST00000472725 NLGN1Q8N2Q7 840 aa25.73■■□□□ 1.71
SF1-213ENST00000472725 HYPKQ9NX55 129 aa25.73■■□□□ 1.71
SF1-213ENST00000472725 SMIM5Q71RC9 77 aa25.72■■□□□ 1.71
SF1-213ENST00000472725 LRP10Q7Z4F1 713 aa25.72■■□□□ 1.71
SF1-213ENST00000472725 SPON1Q9HCB6 807 aa25.72■■□□□ 1.71
SF1-213ENST00000472725 DZIP3Q86Y13 1208 aaKnown RBP25.71■■□□□ 1.71
SF1-213ENST00000472725 STK31Q9BXU1 1019 aa25.71■■□□□ 1.71
SF1-213ENST00000472725 CHPF2Q9P2E5 772 aa25.71■■□□□ 1.71
SF1-213ENST00000472725 ZNF330Q9Y3S2 320 aaPredicted RBP25.71■■□□□ 1.71
SF1-213ENST00000472725 MYL6BP14649 208 aa25.7■■□□□ 1.7
SF1-213ENST00000472725 PIP4K2AP48426 406 aaPredicted RBP25.7■■□□□ 1.7
SF1-213ENST00000472725 NECTIN2Q92692 538 aa25.7■■□□□ 1.7
SF1-213ENST00000472725 SCN7AQ01118 1682 aa25.7■■□□□ 1.7
SF1-213ENST00000472725 BCORQ6W2J9 1755 aa25.69■■□□□ 1.7
SF1-213ENST00000472725 GYS1P13807 737 aa25.69■■□□□ 1.7
SF1-213ENST00000472725 CLEC4GQ6UXB4 293 aa25.69■■□□□ 1.7
SF1-213ENST00000472725 ERVV-1B6SEH8 477 aa25.68■■□□□ 1.7
SF1-213ENST00000472725 ZBTB7AO95365 584 aa25.68■■□□□ 1.7
SF1-213ENST00000472725 CAMTA2O94983 1202 aa25.67■■□□□ 1.7
SF1-213ENST00000472725 PROSER3Q2NL68 480 aa25.67■■□□□ 1.7
SF1-213ENST00000472725 USPL1Q5W0Q7 1092 aa25.67■■□□□ 1.7
SF1-213ENST00000472725 KIF6Q6ZMV9 814 aa25.67■■□□□ 1.7
SF1-213ENST00000472725 TBC1D2BQ9UPU7 963 aa25.67■■□□□ 1.7
SF1-213ENST00000472725 ZNF652Q9Y2D9 606 aa25.67■■□□□ 1.7
SF1-213ENST00000472725 LRP5O75197 1615 aa25.66■■□□□ 1.7
SF1-213ENST00000472725 SRP68Q9UHB9 627 aaKnown RBP25.66■■□□□ 1.7
SF1-213ENST00000472725 MAP3K15Q6ZN16 1313 aa25.65■■□□□ 1.7
SF1-213ENST00000472725 POLD1P28340 1107 aa25.65■■□□□ 1.7
SF1-213ENST00000472725 ARXQ96QS3 562 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms