RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 NIFKQ9BYG3 293 aaKnown RBP10.71□□□□□ -0.69
CLK1-209ENST00000472679 TEAD4Q15561 434 aa10.7□□□□□ -0.7
CLK1-209ENST00000472679 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
CLK1-209ENST00000472679 HOMEZQ8IX15 550 aa10.7□□□□□ -0.7
CLK1-209ENST00000472679 CXXC1Q9P0U4 656 aaPredicted RBP10.7□□□□□ -0.7
CLK1-209ENST00000472679 SCNN1AP37088 669 aa10.69□□□□□ -0.7
CLK1-209ENST00000472679 PLA2G4AP47712 749 aa10.69□□□□□ -0.7
CLK1-209ENST00000472679 PSMA6P60900 246 aaKnown RBP10.69□□□□□ -0.7
CLK1-209ENST00000472679 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
CLK1-209ENST00000472679 SENP3-EIF4A1A0A087X0R7 540 aa10.68□□□□□ -0.7
CLK1-209ENST00000472679 EML1O00423 815 aa10.68□□□□□ -0.7
CLK1-209ENST00000472679 SSFA2P28290 1259 aa10.68□□□□□ -0.7
CLK1-209ENST00000472679 NOS2P35228 1153 aa10.68□□□□□ -0.7
CLK1-209ENST00000472679 L3MBTL2Q969R5 705 aa10.68□□□□□ -0.7
CLK1-209ENST00000472679 C2orf49Q9BVC5 232 aaPredicted RBP10.68□□□□□ -0.7
CLK1-209ENST00000472679 SERTM1A2A2V5 107 aa10.67□□□□□ -0.7
CLK1-209ENST00000472679 PTSQ03393 145 aa10.67□□□□□ -0.7
CLK1-209ENST00000472679 WDR44Q5JSH3 913 aa10.67□□□□□ -0.7
CLK1-209ENST00000472679 CAPN12Q6ZSI9 719 aa10.67□□□□□ -0.7
CLK1-209ENST00000472679 TRAIPQ9BWF2 469 aa10.67□□□□□ -0.7
CLK1-209ENST00000472679 ZNF232Q9UNY5 417 aa10.67□□□□□ -0.7
CLK1-209ENST00000472679 PDE4CQ08493 712 aa10.66□□□□□ -0.7
CLK1-209ENST00000472679 POTEAQ6S8J7 498 aa10.66□□□□□ -0.7
CLK1-209ENST00000472679 TIMMDC1Q9NPL8 285 aa10.66□□□□□ -0.7
CLK1-209ENST00000472679 TXLNAP40222 546 aa10.65□□□□□ -0.7
CLK1-209ENST00000472679 STAG2Q8N3U4 1231 aa10.65□□□□□ -0.7
CLK1-209ENST00000472679 AIDAQ96BJ3 306 aa10.65□□□□□ -0.7
CLK1-209ENST00000472679 MKNK1Q9BUB5 465 aa10.65□□□□□ -0.7
CLK1-209ENST00000472679 HCN4Q9Y3Q4 1203 aa10.65□□□□□ -0.7
CLK1-209ENST00000472679 FOXO3O43524 673 aa10.64□□□□□ -0.71
CLK1-209ENST00000472679 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
CLK1-209ENST00000472679 SLC35F4A4IF30 521 aa10.63□□□□□ -0.71
CLK1-209ENST00000472679 ZNF787Q6DD87 383 aa10.63□□□□□ -0.71
CLK1-209ENST00000472679 MSX1P28360 303 aa10.62□□□□□ -0.71
CLK1-209ENST00000472679 HIRAP54198 1017 aaPredicted RBP10.62□□□□□ -0.71
CLK1-209ENST00000472679 KLRG1Q96E93 195 aa10.62□□□□□ -0.71
CLK1-209ENST00000472679 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
CLK1-209ENST00000472679 DYRK1BQ9Y463 629 aa10.62□□□□□ -0.71
CLK1-209ENST00000472679 ATP4AP20648 1035 aa10.61□□□□□ -0.71
CLK1-209ENST00000472679 CCDC155Q8N6L0 562 aa10.61□□□□□ -0.71
CLK1-209ENST00000472679 C1orf216Q8TAB5 229 aa10.61□□□□□ -0.71
CLK1-209ENST00000472679 NGLY1Q96IV0 654 aa10.61□□□□□ -0.71
CLK1-209ENST00000472679 GAS2L1Q99501 681 aaPredicted RBP10.61□□□□□ -0.71
CLK1-209ENST00000472679 PHACTR1Q9C0D0 580 aa10.61□□□□□ -0.71
CLK1-209ENST00000472679 GPAMQ9HCL2 828 aa10.61□□□□□ -0.71
CLK1-209ENST00000472679 A0A1B0GTH6 734 aa10.6□□□□□ -0.71
CLK1-209ENST00000472679 ALDH16A1Q8IZ83 802 aa10.6□□□□□ -0.71
CLK1-209ENST00000472679 C7orf43Q8WVR3 580 aa10.6□□□□□ -0.71
CLK1-209ENST00000472679 SEPT3Q9UH03 358 aa10.6□□□□□ -0.71
CLK1-209ENST00000472679 NAA30Q147X3 362 aaPredicted RBP10.59□□□□□ -0.71
CLK1-209ENST00000472679 NBPF1Q3BBV0 1214 aa10.59□□□□□ -0.71
CLK1-209ENST00000472679 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
CLK1-209ENST00000472679 QTRT2Q9H974 415 aaKnown RBP10.59□□□□□ -0.71
CLK1-209ENST00000472679 CUEDC1Q9NWM3 386 aaPredicted RBP10.59□□□□□ -0.71
CLK1-209ENST00000472679 ZDHHC3Q9NYG2 299 aa10.59□□□□□ -0.71
CLK1-209ENST00000472679 BRD1O95696 1058 aa10.58□□□□□ -0.72
CLK1-209ENST00000472679 F11P03951 625 aa10.58□□□□□ -0.72
CLK1-209ENST00000472679 SAP130Q9H0E3 1048 aa10.58□□□□□ -0.72
CLK1-209ENST00000472679 RUBCNLQ9H714 662 aa10.58□□□□□ -0.72
CLK1-209ENST00000472679 B4GALNT3Q6L9W6 998 aa10.57□□□□□ -0.72
CLK1-209ENST00000472679 COL26A1Q96A83 441 aa10.57□□□□□ -0.72
CLK1-209ENST00000472679 PPFIA3O75145 1194 aa10.56□□□□□ -0.72
CLK1-209ENST00000472679 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
CLK1-209ENST00000472679 C1orf53Q5VUE5 145 aa10.56□□□□□ -0.72
CLK1-209ENST00000472679 RIPOR1Q6ZS17 1223 aa10.56□□□□□ -0.72
CLK1-209ENST00000472679 THBS1P07996 1170 aa10.55□□□□□ -0.72
CLK1-209ENST00000472679 VEGFBP49765 207 aa10.55□□□□□ -0.72
CLK1-209ENST00000472679 COX20Q5RI15 118 aa10.55□□□□□ -0.72
CLK1-209ENST00000472679 ZIC5Q96T25 663 aa10.55□□□□□ -0.72
CLK1-209ENST00000472679 LRFN2Q9ULH4 789 aa10.55□□□□□ -0.72
CLK1-209ENST00000472679 PTCD1O75127 700 aaKnown RBP10.54□□□□□ -0.72
CLK1-209ENST00000472679 ITGA6P23229 1130 aa10.54□□□□□ -0.72
CLK1-209ENST00000472679 ARSJQ5FYB0 599 aaPredicted RBP10.54□□□□□ -0.72
CLK1-209ENST00000472679 TXNDC2Q86VQ3 553 aa10.54□□□□□ -0.72
CLK1-209ENST00000472679 RHPN1Q8TCX5 695 aa10.54□□□□□ -0.72
CLK1-209ENST00000472679 A0A1W2PNR3 127 aa10.53□□□□□ -0.72
CLK1-209ENST00000472679 DBN1Q16643 649 aa10.53□□□□□ -0.72
CLK1-209ENST00000472679 RTN1Q16799 776 aa10.53□□□□□ -0.72
CLK1-209ENST00000472679 BICDL1Q6ZP65 573 aa10.53□□□□□ -0.72
CLK1-209ENST00000472679 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
CLK1-209ENST00000472679 KLK14Q9P0G3 267 aa10.53□□□□□ -0.72
CLK1-209ENST00000472679 ARID4AP29374 1257 aaPredicted RBP10.52□□□□□ -0.73
CLK1-209ENST00000472679 SERPINB4P48594 390 aa10.52□□□□□ -0.73
CLK1-209ENST00000472679 C16orf46Q6P387 395 aa10.52□□□□□ -0.73
CLK1-209ENST00000472679 ZNF280CQ8ND82 737 aa10.52□□□□□ -0.73
CLK1-209ENST00000472679 GTF3C2Q8WUA4 911 aaPredicted RBP10.52□□□□□ -0.73
CLK1-209ENST00000472679 MYO19Q96H55 970 aa10.52□□□□□ -0.73
CLK1-209ENST00000472679 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
CLK1-209ENST00000472679 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLK1-209ENST00000472679 NXF1Q9UBU9 619 aaKnown RBP10.52□□□□□ -0.73
CLK1-209ENST00000472679 DGKZQ13574 1117 aa10.51□□□□□ -0.73
CLK1-209ENST00000472679 HSH2DQ96JZ2 352 aa10.51□□□□□ -0.73
CLK1-209ENST00000472679 BCS1LQ9Y276 419 aa10.51□□□□□ -0.73
CLK1-209ENST00000472679 DNMT3AQ9Y6K1 912 aaPredicted RBP10.51□□□□□ -0.73
CLK1-209ENST00000472679 TNFRSF10BO14763 440 aa10.5□□□□□ -0.73
CLK1-209ENST00000472679 MTMR3Q13615 1198 aa10.5□□□□□ -0.73
CLK1-209ENST00000472679 FAM26DQ5JW98 314 aa10.5□□□□□ -0.73
CLK1-209ENST00000472679 LRRC69Q6ZNQ3 347 aa10.5□□□□□ -0.73
CLK1-209ENST00000472679 TRIM22Q8IYM9 498 aa10.5□□□□□ -0.73
CLK1-209ENST00000472679 PGBD3Q8N328 593 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms