RNA–Protein interactions for RNA: ENST00000472503.5

TMEM39B-206, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-206ENST00000472503 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
TMEM39B-206ENST00000472503 TSPYL6Q8N831 410 aa16.69■□□□□ 0.26
TMEM39B-206ENST00000472503 ARXQ96QS3 562 aa16.69■□□□□ 0.26
TMEM39B-206ENST00000472503 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
TMEM39B-206ENST00000472503 C4BP0C0L5 1744 aa16.69■□□□□ 0.26
TMEM39B-206ENST00000472503 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
TMEM39B-206ENST00000472503 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
TMEM39B-206ENST00000472503 VAMP4O75379 141 aa16.68■□□□□ 0.26
TMEM39B-206ENST00000472503 POLD1P28340 1107 aa16.68■□□□□ 0.26
TMEM39B-206ENST00000472503 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
TMEM39B-206ENST00000472503 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
TMEM39B-206ENST00000472503 SLC16A10Q8TF71 515 aa16.67■□□□□ 0.26
TMEM39B-206ENST00000472503 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
TMEM39B-206ENST00000472503 SYT17Q9BSW7 474 aa16.67■□□□□ 0.26
TMEM39B-206ENST00000472503 TJP1Q07157 1748 aa16.67■□□□□ 0.26
TMEM39B-206ENST00000472503 SOS1Q07889 1333 aaPredicted RBP16.67■□□□□ 0.26
TMEM39B-206ENST00000472503 GIGYF1O75420 1035 aaPredicted RBP16.66■□□□□ 0.26
TMEM39B-206ENST00000472503 YY1P25490 414 aa16.66■□□□□ 0.26
TMEM39B-206ENST00000472503 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
TMEM39B-206ENST00000472503 HOXB7P09629 217 aa16.65■□□□□ 0.26
TMEM39B-206ENST00000472503 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
TMEM39B-206ENST00000472503 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
TMEM39B-206ENST00000472503 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
TMEM39B-206ENST00000472503 SLC4A9Q96Q91 983 aa16.65■□□□□ 0.26
TMEM39B-206ENST00000472503 MSL1Q68DK7 614 aa16.64■□□□□ 0.25
TMEM39B-206ENST00000472503 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
TMEM39B-206ENST00000472503 AK7Q96M32 723 aa16.64■□□□□ 0.25
TMEM39B-206ENST00000472503 COL5A3P25940 1745 aaPredicted RBP16.64■□□□□ 0.25
TMEM39B-206ENST00000472503 PRAMEF22A3QJZ6 481 aa16.63■□□□□ 0.25
TMEM39B-206ENST00000472503 ELL2O00472 640 aaPredicted RBP16.63■□□□□ 0.25
TMEM39B-206ENST00000472503 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
TMEM39B-206ENST00000472503 ZNF428Q96B54 188 aa16.63■□□□□ 0.25
TMEM39B-206ENST00000472503 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
TMEM39B-206ENST00000472503 PHF14O94880 888 aa16.62■□□□□ 0.25
TMEM39B-206ENST00000472503 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
TMEM39B-206ENST00000472503 SNRPA1P09661 255 aaKnown RBP16.62■□□□□ 0.25
TMEM39B-206ENST00000472503 CHD4Q14839 1912 aa16.61■□□□□ 0.25
TMEM39B-206ENST00000472503 MYH14Q7Z406 1995 aaKnown RBP16.61■□□□□ 0.25
TMEM39B-206ENST00000472503 LOC102724428A0A0B4J2F2 783 aa16.61■□□□□ 0.25
TMEM39B-206ENST00000472503 HMGB2P26583 209 aaKnown RBP16.61■□□□□ 0.25
TMEM39B-206ENST00000472503 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
TMEM39B-206ENST00000472503 SIK1P57059 783 aa16.61■□□□□ 0.25
TMEM39B-206ENST00000472503 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
TMEM39B-206ENST00000472503 ALDH1L2Q3SY69 923 aa16.6■□□□□ 0.25
TMEM39B-206ENST00000472503 RCAN3Q9UKA8 241 aa16.6■□□□□ 0.25
TMEM39B-206ENST00000472503 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
TMEM39B-206ENST00000472503 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
TMEM39B-206ENST00000472503 LINC00116Q8NCU8 138 aa16.59■□□□□ 0.25
TMEM39B-206ENST00000472503 FLAD1Q8NFF5 587 aa16.59■□□□□ 0.25
TMEM39B-206ENST00000472503 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
TMEM39B-206ENST00000472503 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
TMEM39B-206ENST00000472503 SMIM5Q71RC9 77 aa16.58■□□□□ 0.24
TMEM39B-206ENST00000472503 SSH1Q8WYL5 1049 aa16.58■□□□□ 0.24
TMEM39B-206ENST00000472503 RNF123Q5XPI4 1314 aa16.57■□□□□ 0.24
TMEM39B-206ENST00000472503 ITPK1Q13572 414 aa16.57■□□□□ 0.24
TMEM39B-206ENST00000472503 DNAJC10Q8IXB1 793 aa16.57■□□□□ 0.24
TMEM39B-206ENST00000472503 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
TMEM39B-206ENST00000472503 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
TMEM39B-206ENST00000472503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 GNPATO15228 680 aa16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 BCAR3O75815 825 aa16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 CYP19A1P11511 503 aaPredicted RBP16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 PDIA6Q15084 440 aa16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 GPR162Q16538 588 aa16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 CCDC30Q5VVM6 783 aa16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 NLGN2Q8NFZ4 835 aa16.56■□□□□ 0.24
TMEM39B-206ENST00000472503 EIF2S2P20042 333 aaKnown RBP16.55■□□□□ 0.24
TMEM39B-206ENST00000472503 LRP10Q7Z4F1 713 aa16.55■□□□□ 0.24
TMEM39B-206ENST00000472503 CHMP4AQ9BY43 222 aa16.55■□□□□ 0.24
TMEM39B-206ENST00000472503 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
TMEM39B-206ENST00000472503 SSFA2P28290 1259 aa16.54■□□□□ 0.24
TMEM39B-206ENST00000472503 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
TMEM39B-206ENST00000472503 TCERG1O14776 1098 aaKnown RBP16.53■□□□□ 0.24
TMEM39B-206ENST00000472503 NBPF10Q6P3W6 841 aaKnown RBP16.53■□□□□ 0.24
TMEM39B-206ENST00000472503 NBPF15Q8N660 670 aa16.53■□□□□ 0.24
TMEM39B-206ENST00000472503 NECTIN2Q92692 538 aa16.53■□□□□ 0.24
TMEM39B-206ENST00000472503 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
TMEM39B-206ENST00000472503 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
TMEM39B-206ENST00000472503 STARD3NLO95772 234 aa16.52■□□□□ 0.24
TMEM39B-206ENST00000472503 A1BGP04217 495 aa16.52■□□□□ 0.24
TMEM39B-206ENST00000472503 PROSER3Q2NL68 480 aa16.52■□□□□ 0.24
TMEM39B-206ENST00000472503 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
TMEM39B-206ENST00000472503 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
TMEM39B-206ENST00000472503 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
TMEM39B-206ENST00000472503 C4AP0C0L4 1744 aa16.51■□□□□ 0.23
TMEM39B-206ENST00000472503 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
TMEM39B-206ENST00000472503 INTS5Q6P9B9 1019 aaKnown RBP16.51■□□□□ 0.23
TMEM39B-206ENST00000472503 G2E3Q7L622 706 aa16.51■□□□□ 0.23
TMEM39B-206ENST00000472503 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
TMEM39B-206ENST00000472503 ANXA1P04083 346 aa16.5■□□□□ 0.23
TMEM39B-206ENST00000472503 RC3H1Q5TC82 1133 aaKnown RBP16.5■□□□□ 0.23
TMEM39B-206ENST00000472503 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
TMEM39B-206ENST00000472503 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
TMEM39B-206ENST00000472503 UTRNP46939 3433 aa16.5■□□□□ 0.23
TMEM39B-206ENST00000472503 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
TMEM39B-206ENST00000472503 HYPKQ9NX55 129 aa16.49■□□□□ 0.23
TMEM39B-206ENST00000472503 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
TMEM39B-206ENST00000472503 RTCBQ9Y3I0 505 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms