RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 LAS1LQ9Y4W2 734 aaKnown RBP23.19■■□□□ 1.3
VPS72-204ENST00000471423 SNRPA1P09661 255 aaKnown RBP23.18■■□□□ 1.3
VPS72-204ENST00000471423 EIF4A1P60842 406 aaKnown RBP23.18■■□□□ 1.3
VPS72-204ENST00000471423 SLC16A10Q8TF71 515 aa23.18■■□□□ 1.3
VPS72-204ENST00000471423 TEX13AQ9BXU3 409 aaPredicted RBP23.18■■□□□ 1.3
VPS72-204ENST00000471423 BABAM1Q9NWV8 329 aa23.18■■□□□ 1.3
VPS72-204ENST00000471423 ZBTB1Q9Y2K1 713 aa23.18■■□□□ 1.3
VPS72-204ENST00000471423 C4AP0C0L4 1744 aa23.17■■□□□ 1.3
VPS72-204ENST00000471423 LAMB4A4D0S4 1761 aa23.17■■□□□ 1.3
VPS72-204ENST00000471423 USP16Q9Y5T5 823 aa23.16■■□□□ 1.3
VPS72-204ENST00000471423 CHL1O00533 1208 aa23.15■■□□□ 1.3
VPS72-204ENST00000471423 ADRA2BP18089 450 aa23.15■■□□□ 1.3
VPS72-204ENST00000471423 CALD1Q05682 793 aaKnown RBP23.15■■□□□ 1.3
VPS72-204ENST00000471423 CCDC27Q2M243 656 aa23.15■■□□□ 1.3
VPS72-204ENST00000471423 TRAPPC3LQ5T215 181 aa23.15■■□□□ 1.3
VPS72-204ENST00000471423 SALL2Q9Y467 1007 aaPredicted RBP23.15■■□□□ 1.3
VPS72-204ENST00000471423 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.3
VPS72-204ENST00000471423 PTGER2P43116 358 aa23.14■■□□□ 1.29
VPS72-204ENST00000471423 MSL1Q68DK7 614 aa23.14■■□□□ 1.29
VPS72-204ENST00000471423 WWC1Q8IX03 1113 aa23.14■■□□□ 1.29
VPS72-204ENST00000471423 ARHGEF1Q92888 912 aaKnown RBP23.14■■□□□ 1.29
VPS72-204ENST00000471423 CFAP44Q96MT7 982 aa23.14■■□□□ 1.29
VPS72-204ENST00000471423 COL24A1Q17RW2 1714 aa23.13■■□□□ 1.29
VPS72-204ENST00000471423 GIGYF1O75420 1035 aaPredicted RBP23.13■■□□□ 1.29
VPS72-204ENST00000471423 CANXP27824 592 aaKnown RBP23.13■■□□□ 1.29
VPS72-204ENST00000471423 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
VPS72-204ENST00000471423 COL15A1P39059 1388 aa23.13■■□□□ 1.29
VPS72-204ENST00000471423 A1BGP04217 495 aa23.12■■□□□ 1.29
VPS72-204ENST00000471423 IFT57Q9NWB7 429 aa23.12■■□□□ 1.29
VPS72-204ENST00000471423 ZNF853P0CG23 659 aa23.11■■□□□ 1.29
VPS72-204ENST00000471423 RFC4P35249 363 aa23.11■■□□□ 1.29
VPS72-204ENST00000471423 SGIP1Q9BQI5 828 aa23.11■■□□□ 1.29
VPS72-204ENST00000471423 MBIPQ9NS73 344 aa23.11■■□□□ 1.29
VPS72-204ENST00000471423 PIP4K2AP48426 406 aaPredicted RBP23.1■■□□□ 1.29
VPS72-204ENST00000471423 GNAI1P63096 354 aa23.1■■□□□ 1.29
VPS72-204ENST00000471423 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
VPS72-204ENST00000471423 SRP68Q9UHB9 627 aaKnown RBP23.09■■□□□ 1.29
VPS72-204ENST00000471423 ZNF330Q9Y3S2 320 aaPredicted RBP23.09■■□□□ 1.29
VPS72-204ENST00000471423 EIF5P55010 431 aaKnown RBP23.08■■□□□ 1.29
VPS72-204ENST00000471423 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.29
VPS72-204ENST00000471423 USP42Q9H9J4 1324 aaKnown RBP23.08■■□□□ 1.28
VPS72-204ENST00000471423 POLD1P28340 1107 aa23.07■■□□□ 1.28
VPS72-204ENST00000471423 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
VPS72-204ENST00000471423 GYS1P13807 737 aa23.06■■□□□ 1.28
VPS72-204ENST00000471423 NBPF26B4DH59 902 aa23.05■■□□□ 1.28
VPS72-204ENST00000471423 NBPF10Q6P3W6 841 aaKnown RBP23.05■■□□□ 1.28
VPS72-204ENST00000471423 NGEFQ8N5V2 710 aa23.05■■□□□ 1.28
VPS72-204ENST00000471423 NBPF15Q8N660 670 aa23.05■■□□□ 1.28
VPS72-204ENST00000471423 IL16Q14005 1332 aa23.05■■□□□ 1.28
VPS72-204ENST00000471423 ZPR1O75312 459 aa23.04■■□□□ 1.28
VPS72-204ENST00000471423 TSR2Q969E8 191 aaKnown RBP23.04■■□□□ 1.28
VPS72-204ENST00000471423 ARXQ96QS3 562 aa23.04■■□□□ 1.28
VPS72-204ENST00000471423 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
VPS72-204ENST00000471423 EIF2S2P20042 333 aaKnown RBP23.03■■□□□ 1.28
VPS72-204ENST00000471423 USPL1Q5W0Q7 1092 aa23.03■■□□□ 1.28
VPS72-204ENST00000471423 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
VPS72-204ENST00000471423 WDR63Q8IWG1 891 aa23.03■■□□□ 1.28
VPS72-204ENST00000471423 NARFQ9UHQ1 456 aa23.03■■□□□ 1.28
VPS72-204ENST00000471423 A0A087WZG4 1122 aa23.02■■□□□ 1.28
VPS72-204ENST00000471423 FKBP8Q14318 412 aa23.01■■□□□ 1.27
VPS72-204ENST00000471423 NLGN1Q8N2Q7 840 aa23.01■■□□□ 1.27
VPS72-204ENST00000471423 NECTIN2Q92692 538 aa23.01■■□□□ 1.27
VPS72-204ENST00000471423 TBC1D2BQ9UPU7 963 aa23.01■■□□□ 1.27
VPS72-204ENST00000471423 BCORQ6W2J9 1755 aa23■■□□□ 1.27
VPS72-204ENST00000471423 DUSP27Q5VZP5 1158 aa23■■□□□ 1.27
VPS72-204ENST00000471423 ERBB4Q15303 1308 aa23■■□□□ 1.27
VPS72-204ENST00000471423 ZNF521Q96K83 1311 aa23■■□□□ 1.27
VPS72-204ENST00000471423 MMP10P09238 476 aa22.99■■□□□ 1.27
VPS72-204ENST00000471423 HOXB7P09629 217 aa22.99■■□□□ 1.27
VPS72-204ENST00000471423 MYL6BP14649 208 aa22.99■■□□□ 1.27
VPS72-204ENST00000471423 DZIP3Q86Y13 1208 aaKnown RBP22.99■■□□□ 1.27
VPS72-204ENST00000471423 BCL2L12Q9HB09 334 aa22.99■■□□□ 1.27
VPS72-204ENST00000471423 ELL2O00472 640 aaPredicted RBP22.98■■□□□ 1.27
VPS72-204ENST00000471423 HDGFL1Q5TGJ6 251 aa22.98■■□□□ 1.27
VPS72-204ENST00000471423 FANCIQ9NVI1 1328 aa22.98■■□□□ 1.27
VPS72-204ENST00000471423 CAMTA2O94983 1202 aa22.97■■□□□ 1.27
VPS72-204ENST00000471423 C8orf58Q8NAV2 365 aa22.97■■□□□ 1.27
VPS72-204ENST00000471423 FHDC1Q9C0D6 1143 aaPredicted RBP22.97■■□□□ 1.27
VPS72-204ENST00000471423 SPINK5Q9NQ38 1064 aaPredicted RBP22.97■■□□□ 1.27
VPS72-204ENST00000471423 ANXA1P04083 346 aa22.96■■□□□ 1.27
VPS72-204ENST00000471423 PDIA6Q15084 440 aa22.96■■□□□ 1.27
VPS72-204ENST00000471423 PROSER3Q2NL68 480 aa22.96■■□□□ 1.27
VPS72-204ENST00000471423 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
VPS72-204ENST00000471423 LRP10Q7Z4F1 713 aa22.94■■□□□ 1.26
VPS72-204ENST00000471423 TSPYL6Q8N831 410 aa22.94■■□□□ 1.26
VPS72-204ENST00000471423 CHPF2Q9P2E5 772 aa22.94■■□□□ 1.26
VPS72-204ENST00000471423 DDR1Q08345 913 aa22.93■■□□□ 1.26
VPS72-204ENST00000471423 PARP3Q9Y6F1 533 aa22.93■■□□□ 1.26
VPS72-204ENST00000471423 TM4SF1P30408 202 aa22.92■■□□□ 1.26
VPS72-204ENST00000471423 NFIXQ14938 502 aa22.92■■□□□ 1.26
VPS72-204ENST00000471423 TTLL7Q6ZT98 887 aa22.92■■□□□ 1.26
VPS72-204ENST00000471423 MYH16Q9H6N6 1097 aa22.92■■□□□ 1.26
VPS72-204ENST00000471423 DDX21Q9NR30 783 aaKnown RBP eCLIP22.92■■□□□ 1.26
VPS72-204ENST00000471423 POLRMTO00411 1230 aaKnown RBP22.91■■□□□ 1.26
VPS72-204ENST00000471423 GOLGA2Q08379 1002 aa22.91■■□□□ 1.26
VPS72-204ENST00000471423 TBC1D9BQ66K14 1250 aa22.91■■□□□ 1.26
VPS72-204ENST00000471423 KIF6Q6ZMV9 814 aa22.91■■□□□ 1.26
VPS72-204ENST00000471423 BICDL1Q6ZP65 573 aa22.91■■□□□ 1.26
VPS72-204ENST00000471423 SYT17Q9BSW7 474 aa22.91■■□□□ 1.26
VPS72-204ENST00000471423 TWISTNBQ3B726 338 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms