RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
SCNM1-205ENST00000471039 INTS5Q6P9B9 1019 aaKnown RBP16.23■□□□□ 0.19
SCNM1-205ENST00000471039 MIER1Q8N108 512 aa16.23■□□□□ 0.19
SCNM1-205ENST00000471039 BABAM1Q9NWV8 329 aa16.23■□□□□ 0.19
SCNM1-205ENST00000471039 KIF13BQ9NQT8 1826 aa16.22■□□□□ 0.19
SCNM1-205ENST00000471039 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
SCNM1-205ENST00000471039 ADRA2BP18089 450 aa16.22■□□□□ 0.19
SCNM1-205ENST00000471039 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
SCNM1-205ENST00000471039 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
SCNM1-205ENST00000471039 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
SCNM1-205ENST00000471039 SPON1Q9HCB6 807 aa16.22■□□□□ 0.19
SCNM1-205ENST00000471039 AFDNP55196 1824 aaKnown RBP16.22■□□□□ 0.19
SCNM1-205ENST00000471039 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
SCNM1-205ENST00000471039 MSH5O43196 834 aa16.21■□□□□ 0.19
SCNM1-205ENST00000471039 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
SCNM1-205ENST00000471039 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
SCNM1-205ENST00000471039 TEX13AQ9BXU3 409 aaPredicted RBP16.21■□□□□ 0.19
SCNM1-205ENST00000471039 CHL1O00533 1208 aa16.2■□□□□ 0.18
SCNM1-205ENST00000471039 STARD3NLO95772 234 aa16.2■□□□□ 0.18
SCNM1-205ENST00000471039 CALD1Q05682 793 aaKnown RBP16.2■□□□□ 0.18
SCNM1-205ENST00000471039 SGIP1Q9BQI5 828 aa16.2■□□□□ 0.18
SCNM1-205ENST00000471039 LAS1LQ9Y4W2 734 aaKnown RBP16.2■□□□□ 0.18
SCNM1-205ENST00000471039 NRXN2Q9P2S2 1712 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 NUP98P52948 1817 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
SCNM1-205ENST00000471039 ZNF853P0CG23 659 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 PTGER2P43116 358 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 WWC1Q8IX03 1113 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
SCNM1-205ENST00000471039 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 KIAA1551Q9HCM1 1747 aa16.19■□□□□ 0.18
SCNM1-205ENST00000471039 TRAPPC3LQ5T215 181 aa16.18■□□□□ 0.18
SCNM1-205ENST00000471039 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
SCNM1-205ENST00000471039 ARHGEF1Q92888 912 aaKnown RBP16.18■□□□□ 0.18
SCNM1-205ENST00000471039 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
SCNM1-205ENST00000471039 USP42Q9H9J4 1324 aaKnown RBP16.18■□□□□ 0.18
SCNM1-205ENST00000471039 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
SCNM1-205ENST00000471039 GNAI1P63096 354 aa16.17■□□□□ 0.18
SCNM1-205ENST00000471039 ARFGEF2Q9Y6D5 1785 aa16.17■□□□□ 0.18
SCNM1-205ENST00000471039 A1BGP04217 495 aa16.16■□□□□ 0.18
SCNM1-205ENST00000471039 EIF5P55010 431 aaKnown RBP16.16■□□□□ 0.18
SCNM1-205ENST00000471039 KRT24Q2M2I5 525 aa16.16■□□□□ 0.18
SCNM1-205ENST00000471039 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
SCNM1-205ENST00000471039 IL16Q14005 1332 aa16.16■□□□□ 0.18
SCNM1-205ENST00000471039 CACNA1FO60840 1977 aa16.15■□□□□ 0.18
SCNM1-205ENST00000471039 RFC4P35249 363 aa16.15■□□□□ 0.18
SCNM1-205ENST00000471039 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
SCNM1-205ENST00000471039 PIP4K2AP48426 406 aaPredicted RBP16.15■□□□□ 0.18
SCNM1-205ENST00000471039 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
SCNM1-205ENST00000471039 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
SCNM1-205ENST00000471039 GYS1P13807 737 aa16.14■□□□□ 0.17
SCNM1-205ENST00000471039 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
SCNM1-205ENST00000471039 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
SCNM1-205ENST00000471039 DLEC1Q9Y238 1755 aa16.13■□□□□ 0.17
SCNM1-205ENST00000471039 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
SCNM1-205ENST00000471039 POLD1P28340 1107 aa16.13■□□□□ 0.17
SCNM1-205ENST00000471039 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
SCNM1-205ENST00000471039 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
SCNM1-205ENST00000471039 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
SCNM1-205ENST00000471039 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
SCNM1-205ENST00000471039 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
SCNM1-205ENST00000471039 N4BP2Q86UW6 1770 aaPredicted RBP16.13■□□□□ 0.17
SCNM1-205ENST00000471039 HOXB7P09629 217 aa16.12■□□□□ 0.17
SCNM1-205ENST00000471039 TSR2Q969E8 191 aaKnown RBP16.12■□□□□ 0.17
SCNM1-205ENST00000471039 PPP1R1BQ9UD71 204 aaPredicted RBP16.12■□□□□ 0.17
SCNM1-205ENST00000471039 NARFQ9UHQ1 456 aa16.12■□□□□ 0.17
SCNM1-205ENST00000471039 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
SCNM1-205ENST00000471039 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
SCNM1-205ENST00000471039 WDR63Q8IWG1 891 aa16.11■□□□□ 0.17
SCNM1-205ENST00000471039 ARXQ96QS3 562 aa16.11■□□□□ 0.17
SCNM1-205ENST00000471039 A0A087WZG4 1122 aa16.1■□□□□ 0.17
SCNM1-205ENST00000471039 ZPR1O75312 459 aa16.1■□□□□ 0.17
SCNM1-205ENST00000471039 COL11A2P13942 1736 aaPredicted RBP16.1■□□□□ 0.17
SCNM1-205ENST00000471039 C10orf71Q711Q0 1435 aa16.1■□□□□ 0.17
SCNM1-205ENST00000471039 MMP10P09238 476 aa16.09■□□□□ 0.17
SCNM1-205ENST00000471039 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
SCNM1-205ENST00000471039 FKBP8Q14318 412 aa16.09■□□□□ 0.17
SCNM1-205ENST00000471039 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
SCNM1-205ENST00000471039 DZIP3Q86Y13 1208 aaKnown RBP16.09■□□□□ 0.17
SCNM1-205ENST00000471039 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
SCNM1-205ENST00000471039 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
SCNM1-205ENST00000471039 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
SCNM1-205ENST00000471039 LRP10Q7Z4F1 713 aa16.08■□□□□ 0.16
SCNM1-205ENST00000471039 NPM2Q86SE8 214 aaKnown RBP16.08■□□□□ 0.16
SCNM1-205ENST00000471039 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
SCNM1-205ENST00000471039 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
SCNM1-205ENST00000471039 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
SCNM1-205ENST00000471039 CACNA1SQ13698 1873 aa16.08■□□□□ 0.16
SCNM1-205ENST00000471039 MYL6BP14649 208 aa16.07■□□□□ 0.16
SCNM1-205ENST00000471039 PDIA6Q15084 440 aa16.07■□□□□ 0.16
SCNM1-205ENST00000471039 PROSER3Q2NL68 480 aa16.07■□□□□ 0.16
SCNM1-205ENST00000471039 C8orf58Q8NAV2 365 aa16.07■□□□□ 0.16
SCNM1-205ENST00000471039 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
SCNM1-205ENST00000471039 FHDC1Q9C0D6 1143 aaPredicted RBP16.07■□□□□ 0.16
SCNM1-205ENST00000471039 LAMB2P55268 1798 aa16.06■□□□□ 0.16
SCNM1-205ENST00000471039 TNRC6CQ9HCJ0 1690 aaKnown RBP16.06■□□□□ 0.16
SCNM1-205ENST00000471039 ANXA1P04083 346 aa16.06■□□□□ 0.16
SCNM1-205ENST00000471039 DDR1Q08345 913 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms