RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
BRCA2-202ENST00000470094 ZNF295-AS1Q8N0V1 137 aa7.76□□□□□ -1.17
BRCA2-202ENST00000470094 IRF7Q92985 503 aa7.76□□□□□ -1.17
BRCA2-202ENST00000470094 GPAMQ9HCL2 828 aa7.76□□□□□ -1.17
BRCA2-202ENST00000470094 ZNF232Q9UNY5 417 aa7.76□□□□□ -1.17
BRCA2-202ENST00000470094 H7C1W4 665 aa7.75□□□□□ -1.17
BRCA2-202ENST00000470094 PPP1R12BO60237 982 aaPredicted RBP7.75□□□□□ -1.17
BRCA2-202ENST00000470094 CSB-PGBD3P0DP91 1061 aa7.75□□□□□ -1.17
BRCA2-202ENST00000470094 MSX1P28360 303 aa7.75□□□□□ -1.17
BRCA2-202ENST00000470094 PSMA6P60900 246 aaKnown RBP7.75□□□□□ -1.17
BRCA2-202ENST00000470094 TEAD4Q15561 434 aa7.75□□□□□ -1.17
BRCA2-202ENST00000470094 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
BRCA2-202ENST00000470094 STK32AQ8WU08 396 aa7.75□□□□□ -1.17
BRCA2-202ENST00000470094 SCG3Q8WXD2 468 aaKnown RBP7.75□□□□□ -1.17
BRCA2-202ENST00000470094 L3MBTL2Q969R5 705 aa7.75□□□□□ -1.17
BRCA2-202ENST00000470094 ACIN1Q9UKV3 1341 aaKnown RBP7.75□□□□□ -1.17
BRCA2-202ENST00000470094 ATAD2Q6PL18 1390 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 SERTM1A2A2V5 107 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 LGR5O75473 907 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 TATP17735 454 aaPredicted RBP7.74□□□□□ -1.17
BRCA2-202ENST00000470094 NOS2P35228 1153 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 TRIM22Q8IYM9 498 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 GAS2L2Q8NHY3 880 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 C1orf216Q8TAB5 229 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 ZDHHC1Q8WTX9 485 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 GMCL1Q96IK5 515 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 ZDHHC3Q9NYG2 299 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 PARP3Q9Y6F1 533 aa7.74□□□□□ -1.17
BRCA2-202ENST00000470094 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
BRCA2-202ENST00000470094 IGFBP4P22692 258 aa7.73□□□□□ -1.17
BRCA2-202ENST00000470094 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
BRCA2-202ENST00000470094 TMEM164Q5U3C3 297 aa7.73□□□□□ -1.17
BRCA2-202ENST00000470094 SV2AQ7L0J3 742 aa7.73□□□□□ -1.17
BRCA2-202ENST00000470094 VWA5B2Q8N398 1253 aa7.73□□□□□ -1.17
BRCA2-202ENST00000470094 CHMP7Q8WUX9 453 aaPredicted RBP7.73□□□□□ -1.17
BRCA2-202ENST00000470094 NANOS1Q8WY41 292 aaKnown RBP7.73□□□□□ -1.17
BRCA2-202ENST00000470094 RUBCNLQ9H714 662 aa7.73□□□□□ -1.17
BRCA2-202ENST00000470094 CUEDC1Q9NWM3 386 aaPredicted RBP7.73□□□□□ -1.17
BRCA2-202ENST00000470094 ERBB4Q15303 1308 aa7.73□□□□□ -1.17
BRCA2-202ENST00000470094 EML1O00423 815 aa7.72□□□□□ -1.17
BRCA2-202ENST00000470094 C21orf2O43822 256 aa7.72□□□□□ -1.17
BRCA2-202ENST00000470094 ATP4AP20648 1035 aa7.72□□□□□ -1.17
BRCA2-202ENST00000470094 ZNF837Q96EG3 531 aaPredicted RBP7.72□□□□□ -1.17
BRCA2-202ENST00000470094 NUCKS1Q9H1E3 243 aaKnown RBP7.72□□□□□ -1.17
BRCA2-202ENST00000470094 TXLNAP40222 546 aa7.71□□□□□ -1.18
BRCA2-202ENST00000470094 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.18
BRCA2-202ENST00000470094 DBN1Q16643 649 aa7.71□□□□□ -1.18
BRCA2-202ENST00000470094 ARSJQ5FYB0 599 aaPredicted RBP7.71□□□□□ -1.18
BRCA2-202ENST00000470094 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
BRCA2-202ENST00000470094 FOXR1Q6PIV2 292 aa7.71□□□□□ -1.18
BRCA2-202ENST00000470094 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
BRCA2-202ENST00000470094 WEE1P30291 646 aa7.7□□□□□ -1.18
BRCA2-202ENST00000470094 HIRAP54198 1017 aaPredicted RBP7.7□□□□□ -1.18
BRCA2-202ENST00000470094 SH3PXD2AQ5TCZ1 1133 aa7.7□□□□□ -1.18
BRCA2-202ENST00000470094 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
BRCA2-202ENST00000470094 C2orf49Q9BVC5 232 aaPredicted RBP7.7□□□□□ -1.18
BRCA2-202ENST00000470094 CRISPLD1Q9H336 500 aa7.7□□□□□ -1.18
BRCA2-202ENST00000470094 PRMT3O60678 531 aa7.69□□□□□ -1.18
BRCA2-202ENST00000470094 FAM69CQ0P6D2 419 aa7.69□□□□□ -1.18
BRCA2-202ENST00000470094 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
BRCA2-202ENST00000470094 POTEAQ6S8J7 498 aa7.69□□□□□ -1.18
BRCA2-202ENST00000470094 GTPBP3Q969Y2 492 aaKnown RBP7.69□□□□□ -1.18
BRCA2-202ENST00000470094 VTI1AQ96AJ9 217 aa7.69□□□□□ -1.18
BRCA2-202ENST00000470094 HCN4Q9Y3Q4 1203 aa7.69□□□□□ -1.18
BRCA2-202ENST00000470094 FOXO3O43524 673 aa7.68□□□□□ -1.18
BRCA2-202ENST00000470094 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
BRCA2-202ENST00000470094 GPR161Q8N6U8 529 aaKnown RBP7.68□□□□□ -1.18
BRCA2-202ENST00000470094 RHPN1Q8TCX5 695 aa7.68□□□□□ -1.18
BRCA2-202ENST00000470094 CLP1Q92989 425 aaKnown RBP7.68□□□□□ -1.18
BRCA2-202ENST00000470094 PRIMPOLQ96LW4 560 aa7.68□□□□□ -1.18
BRCA2-202ENST00000470094 TRERF1Q96PN7 1200 aa7.68□□□□□ -1.18
BRCA2-202ENST00000470094 PHACTR1Q9C0D0 580 aa7.68□□□□□ -1.18
BRCA2-202ENST00000470094 GPC6Q9Y625 555 aaPredicted RBP7.68□□□□□ -1.18
BRCA2-202ENST00000470094 GJA3Q9Y6H8 435 aa7.68□□□□□ -1.18
BRCA2-202ENST00000470094 A0A1W2PNR3 127 aa7.67□□□□□ -1.18
BRCA2-202ENST00000470094 GMPRP36959 345 aa7.67□□□□□ -1.18
BRCA2-202ENST00000470094 C1orf53Q5VUE5 145 aa7.67□□□□□ -1.18
BRCA2-202ENST00000470094 FIGNL1Q6PIW4 674 aa7.67□□□□□ -1.18
BRCA2-202ENST00000470094 NLRP8Q86W28 1048 aa7.67□□□□□ -1.18
BRCA2-202ENST00000470094 NGLY1Q96IV0 654 aa7.67□□□□□ -1.18
BRCA2-202ENST00000470094 ZIC5Q96T25 663 aa7.67□□□□□ -1.18
BRCA2-202ENST00000470094 NEUROD4Q9HD90 331 aa7.67□□□□□ -1.18
BRCA2-202ENST00000470094 GPR25O00155 361 aa7.66□□□□□ -1.18
BRCA2-202ENST00000470094 ALDH16A1Q8IZ83 802 aa7.66□□□□□ -1.18
BRCA2-202ENST00000470094 THBS1P07996 1170 aa7.65□□□□□ -1.18
BRCA2-202ENST00000470094 FKBP5Q13451 457 aaPredicted RBP7.65□□□□□ -1.18
BRCA2-202ENST00000470094 OCLNQ16625 522 aa7.65□□□□□ -1.18
BRCA2-202ENST00000470094 COL25A1Q9BXS0 654 aaPredicted RBP7.65□□□□□ -1.18
BRCA2-202ENST00000470094 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.65□□□□□ -1.18
BRCA2-202ENST00000470094 CXXC1Q9P0U4 656 aaPredicted RBP7.65□□□□□ -1.18
BRCA2-202ENST00000470094 PHF24Q9UPV7 400 aa7.65□□□□□ -1.18
BRCA2-202ENST00000470094 WIPF1O43516 503 aa7.64□□□□□ -1.19
BRCA2-202ENST00000470094 USTQ9Y2C2 406 aa7.64□□□□□ -1.19
BRCA2-202ENST00000470094 PCDHGC4Q9Y5F7 938 aa7.64□□□□□ -1.19
BRCA2-202ENST00000470094 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
BRCA2-202ENST00000470094 ATXN7O15265 892 aaPredicted RBP7.63□□□□□ -1.19
BRCA2-202ENST00000470094 ATP2B4P23634 1241 aa7.63□□□□□ -1.19
BRCA2-202ENST00000470094 UBAP2LQ14157 1087 aaKnown RBP7.63□□□□□ -1.19
BRCA2-202ENST00000470094 HIF1AQ16665 826 aa7.63□□□□□ -1.19
BRCA2-202ENST00000470094 RTN1Q16799 776 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms