RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ELL2O00472 640 aaPredicted RBP19.2■□□□□ 0.66
COL9A3-209ENST00000469852 SNRPA1P09661 255 aaKnown RBP19.2■□□□□ 0.66
COL9A3-209ENST00000469852 ZNF827Q17R98 1081 aa19.2■□□□□ 0.66
COL9A3-209ENST00000469852 MYH16Q9H6N6 1097 aa19.2■□□□□ 0.66
COL9A3-209ENST00000469852 CYP19A1P11511 503 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-209ENST00000469852 EXOSC9Q06265 439 aaKnown RBP19.19■□□□□ 0.66
COL9A3-209ENST00000469852 DUSP27Q5VZP5 1158 aa19.19■□□□□ 0.66
COL9A3-209ENST00000469852 AMIGO3Q86WK7 504 aa19.18■□□□□ 0.66
COL9A3-209ENST00000469852 CRKLP46109 303 aaKnown RBP19.17■□□□□ 0.66
COL9A3-209ENST00000469852 SMIM5Q71RC9 77 aa19.17■□□□□ 0.66
COL9A3-209ENST00000469852 AKT1S1Q96B36 256 aa19.17■□□□□ 0.66
COL9A3-209ENST00000469852 UBR3Q6ZT12 1888 aa19.17■□□□□ 0.66
COL9A3-209ENST00000469852 PIP4K2AP48426 406 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-209ENST00000469852 INTS5Q6P9B9 1019 aaKnown RBP19.16■□□□□ 0.66
COL9A3-209ENST00000469852 NECTIN2Q92692 538 aa19.16■□□□□ 0.66
COL9A3-209ENST00000469852 A1BGP04217 495 aa19.15■□□□□ 0.66
COL9A3-209ENST00000469852 ZBTB1Q9Y2K1 713 aa19.15■□□□□ 0.66
COL9A3-209ENST00000469852 CNTNAP4Q9C0A0 1308 aa19.15■□□□□ 0.66
COL9A3-209ENST00000469852 EIF2S2P20042 333 aaKnown RBP19.14■□□□□ 0.65
COL9A3-209ENST00000469852 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-209ENST00000469852 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-209ENST00000469852 NBPF26B4DH59 902 aa19.13■□□□□ 0.65
COL9A3-209ENST00000469852 NBPF14Q5TI25 921 aa19.13■□□□□ 0.65
COL9A3-209ENST00000469852 NBPF10Q6P3W6 841 aaKnown RBP19.13■□□□□ 0.65
COL9A3-209ENST00000469852 NBPF15Q8N660 670 aa19.13■□□□□ 0.65
COL9A3-209ENST00000469852 CCDC87Q9NVE4 849 aa19.13■□□□□ 0.65
COL9A3-209ENST00000469852 VAMP4O75379 141 aa19.12■□□□□ 0.65
COL9A3-209ENST00000469852 STARD3NLO95772 234 aa19.12■□□□□ 0.65
COL9A3-209ENST00000469852 HOXB7P09629 217 aa19.12■□□□□ 0.65
COL9A3-209ENST00000469852 SLC15A2Q16348 729 aa19.12■□□□□ 0.65
COL9A3-209ENST00000469852 RC3H1Q5TC82 1133 aaKnown RBP19.12■□□□□ 0.65
COL9A3-209ENST00000469852 AK7Q96M32 723 aa19.12■□□□□ 0.65
COL9A3-209ENST00000469852 QSER1Q2KHR3 1735 aa19.11■□□□□ 0.65
COL9A3-209ENST00000469852 GNPATO15228 680 aa19.11■□□□□ 0.65
COL9A3-209ENST00000469852 ANXA1P04083 346 aa19.11■□□□□ 0.65
COL9A3-209ENST00000469852 CANXP27824 592 aaKnown RBP19.11■□□□□ 0.65
COL9A3-209ENST00000469852 PDIA6Q15084 440 aa19.11■□□□□ 0.65
COL9A3-209ENST00000469852 PROSER3Q2NL68 480 aa19.11■□□□□ 0.65
COL9A3-209ENST00000469852 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
COL9A3-209ENST00000469852 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
COL9A3-209ENST00000469852 TCERG1O14776 1098 aaKnown RBP19.1■□□□□ 0.65
COL9A3-209ENST00000469852 STK32BQ9NY57 414 aa19.1■□□□□ 0.65
COL9A3-209ENST00000469852 SOS1Q07889 1333 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-209ENST00000469852 PNPLA7Q6ZV29 1317 aa19.09■□□□□ 0.65
COL9A3-209ENST00000469852 RPS6KA4O75676 772 aa19.09■□□□□ 0.65
COL9A3-209ENST00000469852 PHF14O94880 888 aa19.09■□□□□ 0.65
COL9A3-209ENST00000469852 CHPF2Q9P2E5 772 aa19.09■□□□□ 0.65
COL9A3-209ENST00000469852 LRP10Q7Z4F1 713 aa19.08■□□□□ 0.64
COL9A3-209ENST00000469852 PDGFDQ9GZP0 370 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-209ENST00000469852 TFCP2L1Q9NZI6 479 aa19.08■□□□□ 0.64
COL9A3-209ENST00000469852 MYL6BP14649 208 aa19.07■□□□□ 0.64
COL9A3-209ENST00000469852 COL15A1P39059 1388 aa19.06■□□□□ 0.64
COL9A3-209ENST00000469852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.06■□□□□ 0.64
COL9A3-209ENST00000469852 EIF5P55010 431 aaKnown RBP19.06■□□□□ 0.64
COL9A3-209ENST00000469852 RTCBQ9Y3I0 505 aaKnown RBP19.06■□□□□ 0.64
COL9A3-209ENST00000469852 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-209ENST00000469852 CASZ1Q86V15 1759 aa19.06■□□□□ 0.64
COL9A3-209ENST00000469852 ERBB4Q15303 1308 aa19.05■□□□□ 0.64
COL9A3-209ENST00000469852 IL6STP40189 918 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-209ENST00000469852 COL23A1Q86Y22 540 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-209ENST00000469852 SSFA2P28290 1259 aa19.04■□□□□ 0.64
COL9A3-209ENST00000469852 CCDC30Q5VVM6 783 aa19.04■□□□□ 0.64
COL9A3-209ENST00000469852 ARHGEF1Q92888 912 aaKnown RBP19.04■□□□□ 0.64
COL9A3-209ENST00000469852 DDX21Q9NR30 783 aaKnown RBP eCLIP19.04■□□□□ 0.64
COL9A3-209ENST00000469852 PHAXQ9H814 394 aaKnown RBP19.03■□□□□ 0.64
COL9A3-209ENST00000469852 SPON1Q9HCB6 807 aa19.03■□□□□ 0.64
COL9A3-209ENST00000469852 DBF4Q9UBU7 674 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-209ENST00000469852 BCORQ6W2J9 1755 aa19.03■□□□□ 0.64
COL9A3-209ENST00000469852 SCN7AQ01118 1682 aa19.02■□□□□ 0.64
COL9A3-209ENST00000469852 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
COL9A3-209ENST00000469852 TTLL7Q6ZT98 887 aa19.02■□□□□ 0.64
COL9A3-209ENST00000469852 G2E3Q7L622 706 aa19.02■□□□□ 0.64
COL9A3-209ENST00000469852 SSH1Q8WYL5 1049 aa19.02■□□□□ 0.64
COL9A3-209ENST00000469852 BCL2L13Q9BXK5 485 aa19.02■□□□□ 0.64
COL9A3-209ENST00000469852 SRP68Q9UHB9 627 aaKnown RBP19.02■□□□□ 0.64
COL9A3-209ENST00000469852 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
COL9A3-209ENST00000469852 XAGE3Q8WTP9 111 aa19.01■□□□□ 0.63
COL9A3-209ENST00000469852 TBC1D2BQ9UPU7 963 aa19.01■□□□□ 0.63
COL9A3-209ENST00000469852 CACNA1FO60840 1977 aa19.01■□□□□ 0.63
COL9A3-209ENST00000469852 SLC4A2P04920 1241 aa19■□□□□ 0.63
COL9A3-209ENST00000469852 CT47B1P0C2W7 299 aaPredicted RBP19■□□□□ 0.63
COL9A3-209ENST00000469852 ADRA2BP18089 450 aa19■□□□□ 0.63
COL9A3-209ENST00000469852 AIMP1Q12904 312 aaKnown RBP19■□□□□ 0.63
COL9A3-209ENST00000469852 MSH5O43196 834 aa18.99■□□□□ 0.63
COL9A3-209ENST00000469852 RARSP54136 660 aaKnown RBP18.99■□□□□ 0.63
COL9A3-209ENST00000469852 COPS6Q7L5N1 327 aa18.99■□□□□ 0.63
COL9A3-209ENST00000469852 DZIP3Q86Y13 1208 aaKnown RBP18.99■□□□□ 0.63
COL9A3-209ENST00000469852 MRPL50Q8N5N7 158 aaKnown RBP18.99■□□□□ 0.63
COL9A3-209ENST00000469852 STK31Q9BXU1 1019 aa18.99■□□□□ 0.63
COL9A3-209ENST00000469852 HYPKQ9NX55 129 aa18.99■□□□□ 0.63
COL9A3-209ENST00000469852 USP42Q9H9J4 1324 aaKnown RBP18.99■□□□□ 0.63
COL9A3-209ENST00000469852 CAMTA2O94983 1202 aa18.98■□□□□ 0.63
COL9A3-209ENST00000469852 RFC4P35249 363 aa18.98■□□□□ 0.63
COL9A3-209ENST00000469852 FLAD1Q8NFF5 587 aa18.98■□□□□ 0.63
COL9A3-209ENST00000469852 BCL2L12Q9HB09 334 aa18.98■□□□□ 0.63
COL9A3-209ENST00000469852 ARFGEF2Q9Y6D5 1785 aa18.97■□□□□ 0.63
COL9A3-209ENST00000469852 USPL1Q5W0Q7 1092 aa18.97■□□□□ 0.63
COL9A3-209ENST00000469852 ARXQ96QS3 562 aa18.97■□□□□ 0.63
COL9A3-209ENST00000469852 NARFQ9UHQ1 456 aa18.97■□□□□ 0.63
COL9A3-209ENST00000469852 NUP98P52948 1817 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms