RNA–Protein interactions for RNA: ENST00000469772.5

GTF2E1-202, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 5

Gene GTF2E1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-202ENST00000469772 MIS18AQ9NYP9 233 aa16.92■□□□□ 0.3
GTF2E1-202ENST00000469772 TJP1Q07157 1748 aa16.92■□□□□ 0.3
GTF2E1-202ENST00000469772 A0A087WZG4 1122 aa16.91■□□□□ 0.3
GTF2E1-202ENST00000469772 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
GTF2E1-202ENST00000469772 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
GTF2E1-202ENST00000469772 ERBB4Q15303 1308 aa16.91■□□□□ 0.3
GTF2E1-202ENST00000469772 PSDA5PKW4 1024 aaPredicted RBP16.9■□□□□ 0.3
GTF2E1-202ENST00000469772 KCNQ3O43525 872 aa16.9■□□□□ 0.3
GTF2E1-202ENST00000469772 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
GTF2E1-202ENST00000469772 SALL2Q9Y467 1007 aaPredicted RBP16.9■□□□□ 0.3
GTF2E1-202ENST00000469772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.89■□□□□ 0.29
GTF2E1-202ENST00000469772 MBIPQ9NS73 344 aa16.89■□□□□ 0.29
GTF2E1-202ENST00000469772 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
GTF2E1-202ENST00000469772 RFC4P35249 363 aa16.88■□□□□ 0.29
GTF2E1-202ENST00000469772 IL6STP40189 918 aaPredicted RBP16.88■□□□□ 0.29
GTF2E1-202ENST00000469772 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
GTF2E1-202ENST00000469772 MTFR1LQ9H019 292 aa16.88■□□□□ 0.29
GTF2E1-202ENST00000469772 PNPLA7Q6ZV29 1317 aa16.88■□□□□ 0.29
GTF2E1-202ENST00000469772 UBR3Q6ZT12 1888 aa16.87■□□□□ 0.29
GTF2E1-202ENST00000469772 PHF14O94880 888 aa16.87■□□□□ 0.29
GTF2E1-202ENST00000469772 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
GTF2E1-202ENST00000469772 E9PSI1 815 aa16.86■□□□□ 0.29
GTF2E1-202ENST00000469772 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
GTF2E1-202ENST00000469772 ZPR1O75312 459 aa16.85■□□□□ 0.29
GTF2E1-202ENST00000469772 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
GTF2E1-202ENST00000469772 POLD1P28340 1107 aa16.85■□□□□ 0.29
GTF2E1-202ENST00000469772 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
GTF2E1-202ENST00000469772 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
GTF2E1-202ENST00000469772 COL23A1Q86Y22 540 aaPredicted RBP16.84■□□□□ 0.29
GTF2E1-202ENST00000469772 ZBTB1Q9Y2K1 713 aa16.84■□□□□ 0.29
GTF2E1-202ENST00000469772 ZNF521Q96K83 1311 aa16.84■□□□□ 0.29
GTF2E1-202ENST00000469772 COL15A1P39059 1388 aa16.84■□□□□ 0.29
GTF2E1-202ENST00000469772 CASZ1Q86V15 1759 aa16.84■□□□□ 0.29
GTF2E1-202ENST00000469772 RGL2O15211 777 aa16.83■□□□□ 0.28
GTF2E1-202ENST00000469772 EIF5P55010 431 aaKnown RBP16.83■□□□□ 0.28
GTF2E1-202ENST00000469772 HNRNPUQ00839 825 aaKnown RBP eCLIP16.83■□□□□ 0.28
GTF2E1-202ENST00000469772 HDGFL1Q5TGJ6 251 aa16.83■□□□□ 0.28
GTF2E1-202ENST00000469772 NLGN1Q8N2Q7 840 aa16.83■□□□□ 0.28
GTF2E1-202ENST00000469772 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
GTF2E1-202ENST00000469772 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
GTF2E1-202ENST00000469772 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
GTF2E1-202ENST00000469772 A1BGP04217 495 aa16.82■□□□□ 0.28
GTF2E1-202ENST00000469772 EIF2S2P20042 333 aaKnown RBP16.82■□□□□ 0.28
GTF2E1-202ENST00000469772 DBF4Q9UBU7 674 aaPredicted RBP16.82■□□□□ 0.28
GTF2E1-202ENST00000469772 ZNF652Q9Y2D9 606 aa16.82■□□□□ 0.28
GTF2E1-202ENST00000469772 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
GTF2E1-202ENST00000469772 CCDC30Q5VVM6 783 aa16.81■□□□□ 0.28
GTF2E1-202ENST00000469772 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
GTF2E1-202ENST00000469772 ZNF330Q9Y3S2 320 aaPredicted RBP16.81■□□□□ 0.28
GTF2E1-202ENST00000469772 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 PRAMEF22A3QJZ6 481 aa16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 ARXQ96QS3 562 aa16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 STK31Q9BXU1 1019 aa16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
GTF2E1-202ENST00000469772 HYPKQ9NX55 129 aa16.79■□□□□ 0.28
GTF2E1-202ENST00000469772 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
GTF2E1-202ENST00000469772 LRP5O75197 1615 aa16.78■□□□□ 0.28
GTF2E1-202ENST00000469772 DZIP3Q86Y13 1208 aaKnown RBP16.78■□□□□ 0.28
GTF2E1-202ENST00000469772 ZNF428Q96B54 188 aa16.78■□□□□ 0.28
GTF2E1-202ENST00000469772 ZBED9Q6R2W3 1325 aa16.77■□□□□ 0.28
GTF2E1-202ENST00000469772 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.28
GTF2E1-202ENST00000469772 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
GTF2E1-202ENST00000469772 CLEC4GQ6UXB4 293 aa16.77■□□□□ 0.28
GTF2E1-202ENST00000469772 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.28
GTF2E1-202ENST00000469772 C4AP0C0L4 1744 aa16.76■□□□□ 0.27
GTF2E1-202ENST00000469772 ERVV-1B6SEH8 477 aa16.76■□□□□ 0.27
GTF2E1-202ENST00000469772 MYL6BP14649 208 aa16.76■□□□□ 0.27
GTF2E1-202ENST00000469772 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
GTF2E1-202ENST00000469772 NBPF26B4DH59 902 aa16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 DDX58O95786 925 aaKnown RBP16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 GYS1P13807 737 aa16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 USPL1Q5W0Q7 1092 aa16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 NBPF10Q6P3W6 841 aaKnown RBP16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 AMIGO3Q86WK7 504 aa16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 NBPF15Q8N660 670 aa16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
GTF2E1-202ENST00000469772 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
GTF2E1-202ENST00000469772 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
GTF2E1-202ENST00000469772 COL24A1Q17RW2 1714 aa16.73■□□□□ 0.27
GTF2E1-202ENST00000469772 HSP90AB3PQ58FF7 597 aa16.73■□□□□ 0.27
GTF2E1-202ENST00000469772 NECTIN2Q92692 538 aa16.73■□□□□ 0.27
GTF2E1-202ENST00000469772 TBC1D2BQ9UPU7 963 aa16.73■□□□□ 0.27
GTF2E1-202ENST00000469772 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
GTF2E1-202ENST00000469772 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
GTF2E1-202ENST00000469772 PDIA6Q15084 440 aa16.72■□□□□ 0.27
GTF2E1-202ENST00000469772 MSL1Q68DK7 614 aa16.72■□□□□ 0.27
GTF2E1-202ENST00000469772 SETDB2Q96T68 719 aa16.72■□□□□ 0.27
GTF2E1-202ENST00000469772 SPINK5Q9NQ38 1064 aaPredicted RBP16.72■□□□□ 0.27
GTF2E1-202ENST00000469772 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
GTF2E1-202ENST00000469772 VAMP4O75379 141 aa16.71■□□□□ 0.27
GTF2E1-202ENST00000469772 CAMTA2O94983 1202 aa16.71■□□□□ 0.27
GTF2E1-202ENST00000469772 MMP10P09238 476 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms