RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 GPC1P35052 558 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 RNF144AP50876 292 aaPredicted RBP7.35□□□□□ -1.23
VPS8-220ENST00000469713 ZNF211Q13398 564 aaPredicted RBP7.35□□□□□ -1.23
VPS8-220ENST00000469713 SH3PXD2AQ5TCZ1 1133 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 TMEM214Q6NUQ4 689 aaKnown RBP7.35□□□□□ -1.23
VPS8-220ENST00000469713 SND1Q7KZF4 910 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS8-220ENST00000469713 STAG2Q8N3U4 1231 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 GTF3C2Q8WUA4 911 aaPredicted RBP7.35□□□□□ -1.23
VPS8-220ENST00000469713 COL26A1Q96A83 441 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 GRIP2Q9C0E4 1043 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 ANO2Q9NQ90 1003 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 CABP1Q9NZU7 370 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
VPS8-220ENST00000469713 SOWAHDA6NJG2 315 aa7.34□□□□□ -1.23
VPS8-220ENST00000469713 EML1O00423 815 aa7.34□□□□□ -1.23
VPS8-220ENST00000469713 TEAD4Q15561 434 aa7.34□□□□□ -1.23
VPS8-220ENST00000469713 TRIM46Q7Z4K8 759 aa7.34□□□□□ -1.23
VPS8-220ENST00000469713 DNMT3AQ9Y6K1 912 aaPredicted RBP7.34□□□□□ -1.23
VPS8-220ENST00000469713 SERTM1A2A2V5 107 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 GTF2E1P29083 439 aaPredicted RBP7.33□□□□□ -1.24
VPS8-220ENST00000469713 NOS2P35228 1153 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 SMCPP49901 116 aaPredicted RBP7.33□□□□□ -1.24
VPS8-220ENST00000469713 MTMR3Q13615 1198 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 CTC1Q2NKJ3 1217 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 POTEAQ6S8J7 498 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 RNF217Q8TC41 542 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 RHBDD1Q8TEB9 315 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 ZNF232Q9UNY5 417 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 CHMP3Q9Y3E7 222 aa7.33□□□□□ -1.24
VPS8-220ENST00000469713 CCDC9Q9Y3X0 531 aaKnown RBP7.33□□□□□ -1.24
VPS8-220ENST00000469713 SCARF1Q14162 830 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 C4orf17Q53FE4 359 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 GNASQ5JWF2 1037 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 L3MBTL2Q969R5 705 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 NGLY1Q96IV0 654 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 NIFKQ9BYG3 293 aaKnown RBP7.32□□□□□ -1.24
VPS8-220ENST00000469713 SAP130Q9H0E3 1048 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 EGFL7Q9UHF1 273 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 DACH1Q9UI36 760 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 HCN4Q9Y3Q4 1203 aa7.32□□□□□ -1.24
VPS8-220ENST00000469713 H3BRB1 525 aa7.31□□□□□ -1.24
VPS8-220ENST00000469713 AXIN1O15169 862 aa7.31□□□□□ -1.24
VPS8-220ENST00000469713 PHKA2P46019 1235 aa7.31□□□□□ -1.24
VPS8-220ENST00000469713 PLA2G4AP47712 749 aa7.31□□□□□ -1.24
VPS8-220ENST00000469713 HIRAP54198 1017 aaPredicted RBP7.31□□□□□ -1.24
VPS8-220ENST00000469713 MFAP1P55081 439 aaKnown RBP7.31□□□□□ -1.24
VPS8-220ENST00000469713 PRICKLE2Q7Z3G6 844 aa7.31□□□□□ -1.24
VPS8-220ENST00000469713 TUT1Q9H6E5 874 aaKnown RBP7.31□□□□□ -1.24
VPS8-220ENST00000469713 QTRT2Q9H974 415 aaKnown RBP7.31□□□□□ -1.24
VPS8-220ENST00000469713 TTLL8A6PVC2 850 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 SPATA31C2B4DYI2 1134 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 ICMTO60725 284 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 TXLNAP40222 546 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 POU4F2Q12837 409 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 COX20Q5RI15 118 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 C16orf46Q6P387 395 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 HELQQ8TDG4 1101 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 ZFP42Q96MM3 310 aa7.3□□□□□ -1.24
VPS8-220ENST00000469713 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.3□□□□□ -1.24
VPS8-220ENST00000469713 SOS2Q07890 1332 aaPredicted RBP7.29□□□□□ -1.24
VPS8-220ENST00000469713 FIGNL2A6NMB9 653 aa7.29□□□□□ -1.24
VPS8-220ENST00000469713 RHOQP17081 205 aa7.29□□□□□ -1.24
VPS8-220ENST00000469713 CCDC27Q2M243 656 aa7.29□□□□□ -1.24
VPS8-220ENST00000469713 LYSMD3Q7Z3D4 306 aa7.29□□□□□ -1.24
VPS8-220ENST00000469713 GLYCTKQ8IVS8 523 aa7.29□□□□□ -1.24
VPS8-220ENST00000469713 ALDH16A1Q8IZ83 802 aa7.29□□□□□ -1.24
VPS8-220ENST00000469713 PHACTR1Q9C0D0 580 aa7.29□□□□□ -1.24
VPS8-220ENST00000469713 BIN2Q9UBW5 565 aaPredicted RBP7.29□□□□□ -1.24
VPS8-220ENST00000469713 TNFRSF10BO14763 440 aa7.28□□□□□ -1.24
VPS8-220ENST00000469713 FKBP4Q02790 459 aaKnown RBP eCLIP7.28□□□□□ -1.24
VPS8-220ENST00000469713 SF3B2Q13435 895 aaKnown RBP7.28□□□□□ -1.24
VPS8-220ENST00000469713 NBPF10Q6P3W6 841 aaKnown RBP7.28□□□□□ -1.24
VPS8-220ENST00000469713 MYO19Q96H55 970 aa7.28□□□□□ -1.24
VPS8-220ENST00000469713 LRFN2Q9ULH4 789 aa7.28□□□□□ -1.24
VPS8-220ENST00000469713 ECM1Q16610 540 aa7.27□□□□□ -1.25
VPS8-220ENST00000469713 AIDAQ96BJ3 306 aa7.27□□□□□ -1.25
VPS8-220ENST00000469713 ATP13A2Q9NQ11 1180 aa7.27□□□□□ -1.25
VPS8-220ENST00000469713 MPSTP25325 297 aa7.26□□□□□ -1.25
VPS8-220ENST00000469713 RTN1Q16799 776 aa7.26□□□□□ -1.25
VPS8-220ENST00000469713 DNMT3LQ9UJW3 386 aa7.26□□□□□ -1.25
VPS8-220ENST00000469713 DGKZQ13574 1117 aa7.25□□□□□ -1.25
VPS8-220ENST00000469713 NBPF1Q3BBV0 1214 aa7.25□□□□□ -1.25
VPS8-220ENST00000469713 FAM26DQ5JW98 314 aa7.25□□□□□ -1.25
VPS8-220ENST00000469713 C1orf53Q5VUE5 145 aa7.25□□□□□ -1.25
VPS8-220ENST00000469713 KLRG1Q96E93 195 aa7.25□□□□□ -1.25
VPS8-220ENST00000469713 ZDHHC3Q9NYG2 299 aa7.25□□□□□ -1.25
VPS8-220ENST00000469713 KLK14Q9P0G3 267 aa7.25□□□□□ -1.25
VPS8-220ENST00000469713 GMPR2Q9P2T1 348 aaKnown RBP7.25□□□□□ -1.25
VPS8-220ENST00000469713 SOBPA7XYQ1 873 aa7.24□□□□□ -1.25
VPS8-220ENST00000469713 NPR3P17342 541 aa7.24□□□□□ -1.25
VPS8-220ENST00000469713 ATP4AP20648 1035 aa7.24□□□□□ -1.25
VPS8-220ENST00000469713 ARHGAP4P98171 946 aa7.24□□□□□ -1.25
VPS8-220ENST00000469713 WDR44Q5JSH3 913 aa7.24□□□□□ -1.25
VPS8-220ENST00000469713 RHPN1Q8TCX5 695 aa7.24□□□□□ -1.25
VPS8-220ENST00000469713 TIMMDC1Q9NPL8 285 aa7.24□□□□□ -1.25
VPS8-220ENST00000469713 STIM2Q9P246 746 aa7.24□□□□□ -1.25
VPS8-220ENST00000469713 FAM13AO94988 1023 aa7.23□□□□□ -1.25
VPS8-220ENST00000469713 TATP17735 454 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms