RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 SWI5Q1ZZU3 235 aa10.57□□□□□ -0.72
XRN1-207ENST00000468894 SH3PXD2AQ5TCZ1 1133 aa10.57□□□□□ -0.72
XRN1-207ENST00000468894 CUEDC1Q9NWM3 386 aaPredicted RBP10.57□□□□□ -0.72
XRN1-207ENST00000468894 PARP3Q9Y6F1 533 aa10.57□□□□□ -0.72
XRN1-207ENST00000468894 ATP4AP20648 1035 aa10.56□□□□□ -0.72
XRN1-207ENST00000468894 NFX1Q12986 1120 aaKnown RBP10.56□□□□□ -0.72
XRN1-207ENST00000468894 POTEAQ6S8J7 498 aa10.56□□□□□ -0.72
XRN1-207ENST00000468894 GAS2L2Q8NHY3 880 aa10.56□□□□□ -0.72
XRN1-207ENST00000468894 SCG3Q8WXD2 468 aaKnown RBP10.56□□□□□ -0.72
XRN1-207ENST00000468894 EML1O00423 815 aa10.55□□□□□ -0.72
XRN1-207ENST00000468894 PPP1R12BO60237 982 aaPredicted RBP10.55□□□□□ -0.72
XRN1-207ENST00000468894 MSX1P28360 303 aa10.55□□□□□ -0.72
XRN1-207ENST00000468894 WEE1P30291 646 aa10.55□□□□□ -0.72
XRN1-207ENST00000468894 L3MBTL2Q969R5 705 aa10.55□□□□□ -0.72
XRN1-207ENST00000468894 GAS2L1Q99501 681 aaPredicted RBP10.55□□□□□ -0.72
XRN1-207ENST00000468894 GPAMQ9HCL2 828 aa10.55□□□□□ -0.72
XRN1-207ENST00000468894 SLAIN2Q9P270 581 aa10.55□□□□□ -0.72
XRN1-207ENST00000468894 ATAD2Q6PL18 1390 aa10.54□□□□□ -0.72
XRN1-207ENST00000468894 TMEM88BA6NKF7 163 aa10.54□□□□□ -0.72
XRN1-207ENST00000468894 IGFBP4P22692 258 aa10.54□□□□□ -0.72
XRN1-207ENST00000468894 NOS2P35228 1153 aa10.54□□□□□ -0.72
XRN1-207ENST00000468894 LCE2CQ5TA81 110 aa10.54□□□□□ -0.72
XRN1-207ENST00000468894 SERTM1A2A2V5 107 aa10.53□□□□□ -0.72
XRN1-207ENST00000468894 F11P03951 625 aa10.53□□□□□ -0.72
XRN1-207ENST00000468894 TXLNAP40222 546 aa10.53□□□□□ -0.72
XRN1-207ENST00000468894 HIRAP54198 1017 aaPredicted RBP10.53□□□□□ -0.72
XRN1-207ENST00000468894 OCLNQ16625 522 aa10.53□□□□□ -0.72
XRN1-207ENST00000468894 ZNF232Q9UNY5 417 aa10.53□□□□□ -0.72
XRN1-207ENST00000468894 PRMT3O60678 531 aa10.52□□□□□ -0.73
XRN1-207ENST00000468894 THBS1P07996 1170 aa10.52□□□□□ -0.73
XRN1-207ENST00000468894 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
XRN1-207ENST00000468894 RIPOR1Q6ZS17 1223 aa10.52□□□□□ -0.73
XRN1-207ENST00000468894 STAG2Q8N3U4 1231 aa10.52□□□□□ -0.73
XRN1-207ENST00000468894 CLP1Q92989 425 aaKnown RBP10.52□□□□□ -0.73
XRN1-207ENST00000468894 PRIMPOLQ96LW4 560 aa10.52□□□□□ -0.73
XRN1-207ENST00000468894 C2orf49Q9BVC5 232 aaPredicted RBP10.52□□□□□ -0.73
XRN1-207ENST00000468894 ZDHHC3Q9NYG2 299 aa10.52□□□□□ -0.73
XRN1-207ENST00000468894 ERBB4Q15303 1308 aa10.52□□□□□ -0.73
XRN1-207ENST00000468894 CSB-PGBD3P0DP91 1061 aa10.51□□□□□ -0.73
XRN1-207ENST00000468894 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
XRN1-207ENST00000468894 TRIM22Q8IYM9 498 aa10.51□□□□□ -0.73
XRN1-207ENST00000468894 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
XRN1-207ENST00000468894 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
XRN1-207ENST00000468894 ZNF837Q96EG3 531 aaPredicted RBP10.51□□□□□ -0.73
XRN1-207ENST00000468894 RUBCNLQ9H714 662 aa10.51□□□□□ -0.73
XRN1-207ENST00000468894 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
XRN1-207ENST00000468894 C1orf216Q8TAB5 229 aa10.5□□□□□ -0.73
XRN1-207ENST00000468894 NANOS1Q8WY41 292 aaKnown RBP10.5□□□□□ -0.73
XRN1-207ENST00000468894 CDC14CA4D256 554 aa10.49□□□□□ -0.73
XRN1-207ENST00000468894 DBN1Q16643 649 aa10.49□□□□□ -0.73
XRN1-207ENST00000468894 LCE2AQ5TA79 106 aaPredicted RBP10.49□□□□□ -0.73
XRN1-207ENST00000468894 RETREG2Q8NC44 543 aa10.49□□□□□ -0.73
XRN1-207ENST00000468894 SLC16A10Q8TF71 515 aa10.49□□□□□ -0.73
XRN1-207ENST00000468894 CRISPLD1Q9H336 500 aa10.49□□□□□ -0.73
XRN1-207ENST00000468894 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
XRN1-207ENST00000468894 FOXO3O43524 673 aa10.48□□□□□ -0.73
XRN1-207ENST00000468894 WFS1O76024 890 aa10.48□□□□□ -0.73
XRN1-207ENST00000468894 TATP17735 454 aaPredicted RBP10.48□□□□□ -0.73
XRN1-207ENST00000468894 FKBP5Q13451 457 aaPredicted RBP10.48□□□□□ -0.73
XRN1-207ENST00000468894 TREML4Q6UXN2 200 aa10.48□□□□□ -0.73
XRN1-207ENST00000468894 VWA5B2Q8N398 1253 aa10.48□□□□□ -0.73
XRN1-207ENST00000468894 CXXC1Q9P0U4 656 aaPredicted RBP10.48□□□□□ -0.73
XRN1-207ENST00000468894 HCN4Q9Y3Q4 1203 aa10.48□□□□□ -0.73
XRN1-207ENST00000468894 KLRG1Q96E93 195 aa10.47□□□□□ -0.73
XRN1-207ENST00000468894 PHACTR1Q9C0D0 580 aa10.47□□□□□ -0.73
XRN1-207ENST00000468894 NUCKS1Q9H1E3 243 aaKnown RBP10.47□□□□□ -0.73
XRN1-207ENST00000468894 USTQ9Y2C2 406 aa10.47□□□□□ -0.73
XRN1-207ENST00000468894 H7C1W4 665 aa10.46□□□□□ -0.73
XRN1-207ENST00000468894 UBAP2LQ14157 1087 aaKnown RBP10.46□□□□□ -0.73
XRN1-207ENST00000468894 GPR161Q8N6U8 529 aaKnown RBP10.46□□□□□ -0.73
XRN1-207ENST00000468894 C7orf43Q8WVR3 580 aa10.46□□□□□ -0.73
XRN1-207ENST00000468894 IRF7Q92985 503 aa10.46□□□□□ -0.73
XRN1-207ENST00000468894 ZIC5Q96T25 663 aa10.46□□□□□ -0.73
XRN1-207ENST00000468894 ATP2B4P23634 1241 aa10.45□□□□□ -0.74
XRN1-207ENST00000468894 LBRQ14739 615 aaKnown RBP10.45□□□□□ -0.74
XRN1-207ENST00000468894 SV2AQ7L0J3 742 aa10.45□□□□□ -0.74
XRN1-207ENST00000468894 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
XRN1-207ENST00000468894 GMCL1Q96IK5 515 aa10.45□□□□□ -0.74
XRN1-207ENST00000468894 A0A1W2PNR3 127 aa10.44□□□□□ -0.74
XRN1-207ENST00000468894 ARSJQ5FYB0 599 aaPredicted RBP10.44□□□□□ -0.74
XRN1-207ENST00000468894 C1orf53Q5VUE5 145 aa10.44□□□□□ -0.74
XRN1-207ENST00000468894 ALDH16A1Q8IZ83 802 aa10.44□□□□□ -0.74
XRN1-207ENST00000468894 GTPBP3Q969Y2 492 aaKnown RBP10.44□□□□□ -0.74
XRN1-207ENST00000468894 NGLY1Q96IV0 654 aa10.44□□□□□ -0.74
XRN1-207ENST00000468894 EFHC2Q5JST6 749 aa10.43□□□□□ -0.74
XRN1-207ENST00000468894 BICDL1Q6ZP65 573 aa10.43□□□□□ -0.74
XRN1-207ENST00000468894 RHPN1Q8TCX5 695 aa10.43□□□□□ -0.74
XRN1-207ENST00000468894 QTRT2Q9H974 415 aaKnown RBP10.43□□□□□ -0.74
XRN1-207ENST00000468894 GPR25O00155 361 aa10.42□□□□□ -0.74
XRN1-207ENST00000468894 GPC6Q9Y625 555 aaPredicted RBP10.42□□□□□ -0.74
XRN1-207ENST00000468894 GMPRP36959 345 aa10.41□□□□□ -0.74
XRN1-207ENST00000468894 CAPN12Q6ZSI9 719 aa10.41□□□□□ -0.74
XRN1-207ENST00000468894 NLRP8Q86W28 1048 aa10.41□□□□□ -0.74
XRN1-207ENST00000468894 VTI1AQ96AJ9 217 aa10.41□□□□□ -0.74
XRN1-207ENST00000468894 MKNK1Q9BUB5 465 aa10.41□□□□□ -0.74
XRN1-207ENST00000468894 SSFA2P28290 1259 aa10.4□□□□□ -0.74
XRN1-207ENST00000468894 GAS6Q14393 721 aa10.4□□□□□ -0.74
XRN1-207ENST00000468894 RTN1Q16799 776 aa10.4□□□□□ -0.74
XRN1-207ENST00000468894 SCNN1AP37088 669 aa10.39□□□□□ -0.75
XRN1-207ENST00000468894 KRT76Q01546 638 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms