RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 CCDC27Q2M243 656 aa21.62■■□□□ 1.05
CDK11A-212ENST00000468397 EIF4A1P60842 406 aaKnown RBP21.61■■□□□ 1.05
CDK11A-212ENST00000468397 TRAPPC3LQ5T215 181 aa21.61■■□□□ 1.05
CDK11A-212ENST00000468397 INTS5Q6P9B9 1019 aaKnown RBP21.61■■□□□ 1.05
CDK11A-212ENST00000468397 AMIGO3Q86WK7 504 aa21.61■■□□□ 1.05
CDK11A-212ENST00000468397 MIER1Q8N108 512 aa21.61■■□□□ 1.05
CDK11A-212ENST00000468397 LAS1LQ9Y4W2 734 aaKnown RBP21.61■■□□□ 1.05
CDK11A-212ENST00000468397 CHL1O00533 1208 aa21.59■■□□□ 1.05
CDK11A-212ENST00000468397 C4AP0C0L4 1744 aa21.59■■□□□ 1.05
CDK11A-212ENST00000468397 NGEFQ8N5V2 710 aa21.59■■□□□ 1.05
CDK11A-212ENST00000468397 CFAP44Q96MT7 982 aa21.59■■□□□ 1.05
CDK11A-212ENST00000468397 ATF5Q9Y2D1 282 aaPredicted RBP21.59■■□□□ 1.05
CDK11A-212ENST00000468397 ZBTB1Q9Y2K1 713 aa21.59■■□□□ 1.05
CDK11A-212ENST00000468397 SENP3-EIF4A1A0A087X0R7 540 aa21.58■■□□□ 1.05
CDK11A-212ENST00000468397 GNAI1P63096 354 aa21.58■■□□□ 1.05
CDK11A-212ENST00000468397 SMIM5Q71RC9 77 aa21.58■■□□□ 1.05
CDK11A-212ENST00000468397 IFT57Q9NWB7 429 aa21.58■■□□□ 1.05
CDK11A-212ENST00000468397 SOS1Q07889 1333 aaPredicted RBP21.57■■□□□ 1.04
CDK11A-212ENST00000468397 RFC4P35249 363 aa21.57■■□□□ 1.04
CDK11A-212ENST00000468397 WWC1Q8IX03 1113 aa21.57■■□□□ 1.04
CDK11A-212ENST00000468397 COL24A1Q17RW2 1714 aa21.57■■□□□ 1.04
CDK11A-212ENST00000468397 SRCAPQ6ZRS2 3230 aa21.56■■□□□ 1.04
CDK11A-212ENST00000468397 PRAMEF22A3QJZ6 481 aa21.56■■□□□ 1.04
CDK11A-212ENST00000468397 GIGYF1O75420 1035 aaPredicted RBP21.56■■□□□ 1.04
CDK11A-212ENST00000468397 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
CDK11A-212ENST00000468397 ARHGEF1Q92888 912 aaKnown RBP21.56■■□□□ 1.04
CDK11A-212ENST00000468397 USP16Q9Y5T5 823 aa21.56■■□□□ 1.04
CDK11A-212ENST00000468397 COL15A1P39059 1388 aa21.56■■□□□ 1.04
CDK11A-212ENST00000468397 POLD1P28340 1107 aa21.55■■□□□ 1.04
CDK11A-212ENST00000468397 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
CDK11A-212ENST00000468397 A1BGP04217 495 aa21.54■■□□□ 1.04
CDK11A-212ENST00000468397 ZNF853P0CG23 659 aa21.54■■□□□ 1.04
CDK11A-212ENST00000468397 PPP1R1BQ9UD71 204 aaPredicted RBP21.54■■□□□ 1.04
CDK11A-212ENST00000468397 SALL2Q9Y467 1007 aaPredicted RBP21.54■■□□□ 1.04
CDK11A-212ENST00000468397 IL6STP40189 918 aaPredicted RBP21.53■■□□□ 1.04
CDK11A-212ENST00000468397 PTGER2P43116 358 aa21.53■■□□□ 1.04
CDK11A-212ENST00000468397 MSL1Q68DK7 614 aa21.53■■□□□ 1.04
CDK11A-212ENST00000468397 MBIPQ9NS73 344 aa21.53■■□□□ 1.04
CDK11A-212ENST00000468397 IL16Q14005 1332 aa21.53■■□□□ 1.04
CDK11A-212ENST00000468397 A0A087WZG4 1122 aa21.52■■□□□ 1.04
CDK11A-212ENST00000468397 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.04
CDK11A-212ENST00000468397 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.03
CDK11A-212ENST00000468397 ZPR1O75312 459 aa21.51■■□□□ 1.03
CDK11A-212ENST00000468397 WDR63Q8IWG1 891 aa21.51■■□□□ 1.03
CDK11A-212ENST00000468397 SGIP1Q9BQI5 828 aa21.51■■□□□ 1.03
CDK11A-212ENST00000468397 ZNF330Q9Y3S2 320 aaPredicted RBP21.51■■□□□ 1.03
CDK11A-212ENST00000468397 HOXB7P09629 217 aa21.49■■□□□ 1.03
CDK11A-212ENST00000468397 NLGN1Q8N2Q7 840 aa21.49■■□□□ 1.03
CDK11A-212ENST00000468397 ERBB4Q15303 1308 aa21.49■■□□□ 1.03
CDK11A-212ENST00000468397 GYS1P13807 737 aa21.48■■□□□ 1.03
CDK11A-212ENST00000468397 ARXQ96QS3 562 aa21.48■■□□□ 1.03
CDK11A-212ENST00000468397 SRP68Q9UHB9 627 aaKnown RBP21.48■■□□□ 1.03
CDK11A-212ENST00000468397 NARFQ9UHQ1 456 aa21.48■■□□□ 1.03
CDK11A-212ENST00000468397 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
CDK11A-212ENST00000468397 PIP4K2AP48426 406 aaPredicted RBP21.47■■□□□ 1.03
CDK11A-212ENST00000468397 NBPF26B4DH59 902 aa21.46■■□□□ 1.03
CDK11A-212ENST00000468397 EIF2S2P20042 333 aaKnown RBP21.46■■□□□ 1.03
CDK11A-212ENST00000468397 KRT24Q2M2I5 525 aa21.46■■□□□ 1.03
CDK11A-212ENST00000468397 NBPF10Q6P3W6 841 aaKnown RBP21.46■■□□□ 1.03
CDK11A-212ENST00000468397 NBPF15Q8N660 670 aa21.46■■□□□ 1.03
CDK11A-212ENST00000468397 DUSP27Q5VZP5 1158 aa21.45■■□□□ 1.02
CDK11A-212ENST00000468397 USPL1Q5W0Q7 1092 aa21.45■■□□□ 1.02
CDK11A-212ENST00000468397 TSR2Q969E8 191 aaKnown RBP21.45■■□□□ 1.02
CDK11A-212ENST00000468397 BCORQ6W2J9 1755 aa21.44■■□□□ 1.02
CDK11A-212ENST00000468397 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
CDK11A-212ENST00000468397 DZIP3Q86Y13 1208 aaKnown RBP21.44■■□□□ 1.02
CDK11A-212ENST00000468397 MMP10P09238 476 aa21.43■■□□□ 1.02
CDK11A-212ENST00000468397 FKBP8Q14318 412 aa21.43■■□□□ 1.02
CDK11A-212ENST00000468397 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
CDK11A-212ENST00000468397 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
CDK11A-212ENST00000468397 MYL6BP14649 208 aa21.42■■□□□ 1.02
CDK11A-212ENST00000468397 NECTIN2Q92692 538 aa21.42■■□□□ 1.02
CDK11A-212ENST00000468397 ZNF521Q96K83 1311 aa21.42■■□□□ 1.02
CDK11A-212ENST00000468397 MYH16Q9H6N6 1097 aa21.42■■□□□ 1.02
CDK11A-212ENST00000468397 FANCIQ9NVI1 1328 aa21.42■■□□□ 1.02
CDK11A-212ENST00000468397 CAMTA2O94983 1202 aa21.4■■□□□ 1.02
CDK11A-212ENST00000468397 GOLGA2Q08379 1002 aa21.4■■□□□ 1.02
CDK11A-212ENST00000468397 C8orf58Q8NAV2 365 aa21.4■■□□□ 1.02
CDK11A-212ENST00000468397 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
CDK11A-212ENST00000468397 PARP3Q9Y6F1 533 aa21.4■■□□□ 1.02
CDK11A-212ENST00000468397 ELL2O00472 640 aaPredicted RBP21.39■■□□□ 1.01
CDK11A-212ENST00000468397 KIF6Q6ZMV9 814 aa21.39■■□□□ 1.01
CDK11A-212ENST00000468397 KLHL34Q8N239 644 aa21.39■■□□□ 1.01
CDK11A-212ENST00000468397 FHDC1Q9C0D6 1143 aaPredicted RBP21.39■■□□□ 1.01
CDK11A-212ENST00000468397 BCL2L12Q9HB09 334 aa21.39■■□□□ 1.01
CDK11A-212ENST00000468397 DDX21Q9NR30 783 aaKnown RBP eCLIP21.39■■□□□ 1.01
CDK11A-212ENST00000468397 RGL2O15211 777 aa21.38■■□□□ 1.01
CDK11A-212ENST00000468397 CHPF2Q9P2E5 772 aa21.38■■□□□ 1.01
CDK11A-212ENST00000468397 DBF4Q9UBU7 674 aaPredicted RBP21.38■■□□□ 1.01
CDK11A-212ENST00000468397 PDIA6Q15084 440 aa21.37■■□□□ 1.01
CDK11A-212ENST00000468397 NFIXQ14938 502 aa21.36■■□□□ 1.01
CDK11A-212ENST00000468397 PROSER3Q2NL68 480 aa21.36■■□□□ 1.01
CDK11A-212ENST00000468397 TWISTNBQ3B726 338 aaPredicted RBP21.36■■□□□ 1.01
CDK11A-212ENST00000468397 CLEC4GQ6UXB4 293 aa21.36■■□□□ 1.01
CDK11A-212ENST00000468397 TSPYL6Q8N831 410 aa21.36■■□□□ 1.01
CDK11A-212ENST00000468397 SPINK5Q9NQ38 1064 aaPredicted RBP21.36■■□□□ 1.01
CDK11A-212ENST00000468397 MAP3K15Q6ZN16 1313 aa21.35■■□□□ 1.01
CDK11A-212ENST00000468397 E9PSI1 815 aa21.35■■□□□ 1.01
CDK11A-212ENST00000468397 ANXA1P04083 346 aa21.35■■□□□ 1.01
CDK11A-212ENST00000468397 TM4SF1P30408 202 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms