RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 LINC00116Q8NCU8 138 aa19.62■□□□□ 0.73
SNIP1-202ENST00000468040 CNTNAP4Q9C0A0 1308 aa19.61■□□□□ 0.73
SNIP1-202ENST00000468040 CT47B1P0C2W7 299 aaPredicted RBP19.61■□□□□ 0.73
SNIP1-202ENST00000468040 CYP19A1P11511 503 aaPredicted RBP19.61■□□□□ 0.73
SNIP1-202ENST00000468040 HDGFL1Q5TGJ6 251 aa19.61■□□□□ 0.73
SNIP1-202ENST00000468040 USP16Q9Y5T5 823 aa19.61■□□□□ 0.73
SNIP1-202ENST00000468040 C4BP0C0L5 1744 aa19.6■□□□□ 0.73
SNIP1-202ENST00000468040 NUP188Q5SRE5 1749 aa19.6■□□□□ 0.73
SNIP1-202ENST00000468040 ERBB4Q15303 1308 aa19.6■□□□□ 0.73
SNIP1-202ENST00000468040 VAMP4O75379 141 aa19.59■□□□□ 0.73
SNIP1-202ENST00000468040 EIF2S2P20042 333 aaKnown RBP19.59■□□□□ 0.73
SNIP1-202ENST00000468040 RC3H1Q5TC82 1133 aaKnown RBP19.59■□□□□ 0.73
SNIP1-202ENST00000468040 ZNF428Q96B54 188 aa19.59■□□□□ 0.73
SNIP1-202ENST00000468040 CRKLP46109 303 aaKnown RBP19.58■□□□□ 0.72
SNIP1-202ENST00000468040 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.72
SNIP1-202ENST00000468040 AK7Q96M32 723 aa19.58■□□□□ 0.72
SNIP1-202ENST00000468040 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
SNIP1-202ENST00000468040 SOCS7O14512 581 aa19.57■□□□□ 0.72
SNIP1-202ENST00000468040 A1BGP04217 495 aa19.56■□□□□ 0.72
SNIP1-202ENST00000468040 INTS5Q6P9B9 1019 aaKnown RBP19.56■□□□□ 0.72
SNIP1-202ENST00000468040 DBF4Q9UBU7 674 aaPredicted RBP19.56■□□□□ 0.72
SNIP1-202ENST00000468040 NBPF14Q5TI25 921 aa19.55■□□□□ 0.72
SNIP1-202ENST00000468040 NECTIN2Q92692 538 aa19.55■□□□□ 0.72
SNIP1-202ENST00000468040 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
SNIP1-202ENST00000468040 STK31Q9BXU1 1019 aa19.55■□□□□ 0.72
SNIP1-202ENST00000468040 STK32BQ9NY57 414 aa19.55■□□□□ 0.72
SNIP1-202ENST00000468040 ZBTB1Q9Y2K1 713 aa19.55■□□□□ 0.72
SNIP1-202ENST00000468040 GNPATO15228 680 aa19.54■□□□□ 0.72
SNIP1-202ENST00000468040 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
SNIP1-202ENST00000468040 RPS6KA4O75676 772 aa19.53■□□□□ 0.72
SNIP1-202ENST00000468040 CANXP27824 592 aaKnown RBP19.53■□□□□ 0.72
SNIP1-202ENST00000468040 IL6STP40189 918 aaPredicted RBP19.53■□□□□ 0.72
SNIP1-202ENST00000468040 NPM2Q86SE8 214 aaKnown RBP19.53■□□□□ 0.72
SNIP1-202ENST00000468040 CHPF2Q9P2E5 772 aa19.53■□□□□ 0.72
SNIP1-202ENST00000468040 RTCBQ9Y3I0 505 aaKnown RBP19.53■□□□□ 0.72
SNIP1-202ENST00000468040 MYH14Q7Z406 1995 aaKnown RBP19.53■□□□□ 0.72
SNIP1-202ENST00000468040 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
SNIP1-202ENST00000468040 ZNF827Q17R98 1081 aa19.52■□□□□ 0.72
SNIP1-202ENST00000468040 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
SNIP1-202ENST00000468040 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
SNIP1-202ENST00000468040 TFCP2L1Q9NZI6 479 aa19.52■□□□□ 0.72
SNIP1-202ENST00000468040 ADRA2BP18089 450 aa19.51■□□□□ 0.71
SNIP1-202ENST00000468040 PDIA6Q15084 440 aa19.51■□□□□ 0.71
SNIP1-202ENST00000468040 SLC15A2Q16348 729 aa19.51■□□□□ 0.71
SNIP1-202ENST00000468040 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
SNIP1-202ENST00000468040 ANO8Q9HCE9 1232 aaPredicted RBP19.51■□□□□ 0.71
SNIP1-202ENST00000468040 HYPKQ9NX55 129 aa19.51■□□□□ 0.71
SNIP1-202ENST00000468040 UBR3Q6ZT12 1888 aa19.5■□□□□ 0.71
SNIP1-202ENST00000468040 MYL6BP14649 208 aa19.5■□□□□ 0.71
SNIP1-202ENST00000468040 SSFA2P28290 1259 aa19.5■□□□□ 0.71
SNIP1-202ENST00000468040 PIP4K2AP48426 406 aaPredicted RBP19.5■□□□□ 0.71
SNIP1-202ENST00000468040 EIF5P55010 431 aaKnown RBP19.5■□□□□ 0.71
SNIP1-202ENST00000468040 FLAD1Q8NFF5 587 aa19.5■□□□□ 0.71
SNIP1-202ENST00000468040 COL15A1P39059 1388 aa19.49■□□□□ 0.71
SNIP1-202ENST00000468040 PROSER3Q2NL68 480 aa19.49■□□□□ 0.71
SNIP1-202ENST00000468040 ZNF330Q9Y3S2 320 aaPredicted RBP19.49■□□□□ 0.71
SNIP1-202ENST00000468040 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
SNIP1-202ENST00000468040 CACNA1FO60840 1977 aa19.48■□□□□ 0.71
SNIP1-202ENST00000468040 A0A087WZG4 1122 aa19.48■□□□□ 0.71
SNIP1-202ENST00000468040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.48■□□□□ 0.71
SNIP1-202ENST00000468040 TCERG1O14776 1098 aaKnown RBP19.48■□□□□ 0.71
SNIP1-202ENST00000468040 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
SNIP1-202ENST00000468040 RARSP54136 660 aaKnown RBP19.48■□□□□ 0.71
SNIP1-202ENST00000468040 TRAPPC3LQ5T215 181 aa19.48■□□□□ 0.71
SNIP1-202ENST00000468040 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
SNIP1-202ENST00000468040 SMC4Q9NTJ3 1288 aa19.48■□□□□ 0.71
SNIP1-202ENST00000468040 PHF14O94880 888 aa19.47■□□□□ 0.71
SNIP1-202ENST00000468040 ANXA1P04083 346 aa19.47■□□□□ 0.71
SNIP1-202ENST00000468040 LRP10Q7Z4F1 713 aa19.47■□□□□ 0.71
SNIP1-202ENST00000468040 TUBGCP6Q96RT7 1819 aa19.46■□□□□ 0.71
SNIP1-202ENST00000468040 RFC4P35249 363 aa19.45■□□□□ 0.7
SNIP1-202ENST00000468040 KIF6Q6ZMV9 814 aa19.45■□□□□ 0.7
SNIP1-202ENST00000468040 AMIGO3Q86WK7 504 aa19.45■□□□□ 0.7
SNIP1-202ENST00000468040 BCL2L13Q9BXK5 485 aa19.45■□□□□ 0.7
SNIP1-202ENST00000468040 RCAN3Q9UKA8 241 aa19.45■□□□□ 0.7
SNIP1-202ENST00000468040 PNPLA7Q6ZV29 1317 aa19.45■□□□□ 0.7
SNIP1-202ENST00000468040 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
SNIP1-202ENST00000468040 COPS6Q7L5N1 327 aa19.44■□□□□ 0.7
SNIP1-202ENST00000468040 DZIP3Q86Y13 1208 aaKnown RBP19.44■□□□□ 0.7
SNIP1-202ENST00000468040 MRPL50Q8N5N7 158 aaKnown RBP19.44■□□□□ 0.7
SNIP1-202ENST00000468040 XAGE3Q8WTP9 111 aa19.44■□□□□ 0.7
SNIP1-202ENST00000468040 ARHGEF1Q92888 912 aaKnown RBP19.44■□□□□ 0.7
SNIP1-202ENST00000468040 C4AP0C0L4 1744 aa19.43■□□□□ 0.7
SNIP1-202ENST00000468040 DDX58O95786 925 aaKnown RBP19.43■□□□□ 0.7
SNIP1-202ENST00000468040 FLIIQ13045 1269 aa19.43■□□□□ 0.7
SNIP1-202ENST00000468040 ARXQ96QS3 562 aa19.43■□□□□ 0.7
SNIP1-202ENST00000468040 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
SNIP1-202ENST00000468040 KIF16BQ96L93 1317 aa19.43■□□□□ 0.7
SNIP1-202ENST00000468040 RGL2O15211 777 aa19.42■□□□□ 0.7
SNIP1-202ENST00000468040 ZPR1O75312 459 aa19.42■□□□□ 0.7
SNIP1-202ENST00000468040 AIMP1Q12904 312 aaKnown RBP19.42■□□□□ 0.7
SNIP1-202ENST00000468040 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
SNIP1-202ENST00000468040 COL23A1Q86Y22 540 aaPredicted RBP19.42■□□□□ 0.7
SNIP1-202ENST00000468040 NARFQ9UHQ1 456 aa19.42■□□□□ 0.7
SNIP1-202ENST00000468040 USP42Q9H9J4 1324 aaKnown RBP19.42■□□□□ 0.7
SNIP1-202ENST00000468040 MSH5O43196 834 aa19.41■□□□□ 0.7
SNIP1-202ENST00000468040 TTLL7Q6ZT98 887 aa19.41■□□□□ 0.7
SNIP1-202ENST00000468040 G2E3Q7L622 706 aa19.41■□□□□ 0.7
SNIP1-202ENST00000468040 TBC1D2BQ9UPU7 963 aa19.41■□□□□ 0.7
SNIP1-202ENST00000468040 PTPRCP08575 1304 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms