RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
PTMA-211ENST00000468027 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
PTMA-211ENST00000468027 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
PTMA-211ENST00000468027 ZBTB1Q9Y2K1 713 aa17.19■□□□□ 0.34
PTMA-211ENST00000468027 N4BP2Q86UW6 1770 aaPredicted RBP17.19■□□□□ 0.34
PTMA-211ENST00000468027 GYS1P13807 737 aa17.18■□□□□ 0.34
PTMA-211ENST00000468027 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
PTMA-211ENST00000468027 THUMPD2Q9BTF0 503 aaKnown RBP17.18■□□□□ 0.34
PTMA-211ENST00000468027 TRIM35Q9UPQ4 493 aa17.18■□□□□ 0.34
PTMA-211ENST00000468027 NUP98P52948 1817 aa17.17■□□□□ 0.34
PTMA-211ENST00000468027 PRAMEF22A3QJZ6 481 aa17.17■□□□□ 0.34
PTMA-211ENST00000468027 NEFMP07197 916 aa17.17■□□□□ 0.34
PTMA-211ENST00000468027 POLD1P28340 1107 aa17.17■□□□□ 0.34
PTMA-211ENST00000468027 RIPK4P57078 832 aa17.17■□□□□ 0.34
PTMA-211ENST00000468027 WDR43Q15061 677 aaKnown RBP eCLIP17.17■□□□□ 0.342e-17■■■□□ 15.8
PTMA-211ENST00000468027 USP42Q9H9J4 1324 aaKnown RBP17.17■□□□□ 0.34
PTMA-211ENST00000468027 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
PTMA-211ENST00000468027 MIS18AQ9NYP9 233 aa17.16■□□□□ 0.34
PTMA-211ENST00000468027 COL15A1P39059 1388 aa17.15■□□□□ 0.34
PTMA-211ENST00000468027 TEX13AQ9BXU3 409 aaPredicted RBP17.15■□□□□ 0.34
PTMA-211ENST00000468027 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
PTMA-211ENST00000468027 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
PTMA-211ENST00000468027 SRP68Q9UHB9 627 aaKnown RBP17.14■□□□□ 0.33
PTMA-211ENST00000468027 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
PTMA-211ENST00000468027 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
PTMA-211ENST00000468027 RFC4P35249 363 aa17.13■□□□□ 0.33
PTMA-211ENST00000468027 EIF4A1P60842 406 aaKnown RBP17.13■□□□□ 0.33
PTMA-211ENST00000468027 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
PTMA-211ENST00000468027 DLEC1Q9Y238 1755 aa17.12■□□□□ 0.33
PTMA-211ENST00000468027 ANP32CO43423 234 aa17.12■□□□□ 0.33
PTMA-211ENST00000468027 STARD3NLO95772 234 aa17.12■□□□□ 0.33
PTMA-211ENST00000468027 A1BGP04217 495 aa17.12■□□□□ 0.33
PTMA-211ENST00000468027 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
PTMA-211ENST00000468027 FKBP8Q14318 412 aa17.12■□□□□ 0.33
PTMA-211ENST00000468027 NLGN1Q8N2Q7 840 aa17.12■□□□□ 0.33
PTMA-211ENST00000468027 NLGN2Q8NFZ4 835 aa17.12■□□□□ 0.33
PTMA-211ENST00000468027 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
PTMA-211ENST00000468027 TM4SF1P30408 202 aa17.11■□□□□ 0.33
PTMA-211ENST00000468027 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
PTMA-211ENST00000468027 ARFGEF1Q9Y6D6 1849 aa17.1■□□□□ 0.33
PTMA-211ENST00000468027 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
PTMA-211ENST00000468027 MMP10P09238 476 aa17.1■□□□□ 0.33
PTMA-211ENST00000468027 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
PTMA-211ENST00000468027 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
PTMA-211ENST00000468027 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
PTMA-211ENST00000468027 CD2APQ9Y5K6 639 aa17.1■□□□□ 0.33
PTMA-211ENST00000468027 C10orf71Q711Q0 1435 aa17.1■□□□□ 0.33
PTMA-211ENST00000468027 NBPF26B4DH59 902 aa17.09■□□□□ 0.33
PTMA-211ENST00000468027 CHL1O00533 1208 aa17.09■□□□□ 0.33
PTMA-211ENST00000468027 APAF1O14727 1248 aa17.09■□□□□ 0.33
PTMA-211ENST00000468027 NEUROD2Q15784 382 aa17.09■□□□□ 0.33
PTMA-211ENST00000468027 USPL1Q5W0Q7 1092 aa17.09■□□□□ 0.33
PTMA-211ENST00000468027 NBPF10Q6P3W6 841 aaKnown RBP17.09■□□□□ 0.33
PTMA-211ENST00000468027 NBPF15Q8N660 670 aa17.09■□□□□ 0.33
PTMA-211ENST00000468027 DDR1Q08345 913 aa17.08■□□□□ 0.32
PTMA-211ENST00000468027 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
PTMA-211ENST00000468027 PXDNLA1KZ92 1463 aa17.06■□□□□ 0.32
PTMA-211ENST00000468027 POLRMTO00411 1230 aaKnown RBP17.06■□□□□ 0.32
PTMA-211ENST00000468027 ZNF853P0CG23 659 aa17.06■□□□□ 0.32
PTMA-211ENST00000468027 PIP4K2AP48426 406 aaPredicted RBP17.06■□□□□ 0.32
PTMA-211ENST00000468027 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
PTMA-211ENST00000468027 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
PTMA-211ENST00000468027 ZPR1O75312 459 aa17.05■□□□□ 0.32
PTMA-211ENST00000468027 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
PTMA-211ENST00000468027 A0A087WZG4 1122 aa17.04■□□□□ 0.32
PTMA-211ENST00000468027 CAMTA2O94983 1202 aa17.04■□□□□ 0.32
PTMA-211ENST00000468027 NFIXQ14938 502 aa17.04■□□□□ 0.32
PTMA-211ENST00000468027 LRP10Q7Z4F1 713 aa17.04■□□□□ 0.32
PTMA-211ENST00000468027 CACNA1FO60840 1977 aa17.04■□□□□ 0.32
PTMA-211ENST00000468027 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
PTMA-211ENST00000468027 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
PTMA-211ENST00000468027 TBC1D2BQ9UPU7 963 aa17.03■□□□□ 0.32
PTMA-211ENST00000468027 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
PTMA-211ENST00000468027 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.32
PTMA-211ENST00000468027 PDIA6Q15084 440 aa17.02■□□□□ 0.32
PTMA-211ENST00000468027 KLHL34Q8N239 644 aa17.02■□□□□ 0.32
PTMA-211ENST00000468027 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
PTMA-211ENST00000468027 SBF1O95248 1867 aa17.01■□□□□ 0.31
PTMA-211ENST00000468027 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.313e-7■□□□□ 8.5
PTMA-211ENST00000468027 CCDC27Q2M243 656 aa17.01■□□□□ 0.31
PTMA-211ENST00000468027 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
PTMA-211ENST00000468027 TBC1D9BQ66K14 1250 aa17.01■□□□□ 0.31
PTMA-211ENST00000468027 RGL2O15211 777 aa17■□□□□ 0.31
PTMA-211ENST00000468027 KCNA3P22001 575 aa17■□□□□ 0.31
PTMA-211ENST00000468027 DZIP3Q86Y13 1208 aaKnown RBP17■□□□□ 0.31
PTMA-211ENST00000468027 ERBB4Q15303 1308 aa16.99■□□□□ 0.31
PTMA-211ENST00000468027 CCDC88AQ3V6T2 1871 aa16.99■□□□□ 0.31
PTMA-211ENST00000468027 TGFB2P61812 414 aa16.99■□□□□ 0.31
PTMA-211ENST00000468027 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
PTMA-211ENST00000468027 CLEC4GQ6UXB4 293 aa16.98■□□□□ 0.31
PTMA-211ENST00000468027 IFT57Q9NWB7 429 aa16.98■□□□□ 0.31
PTMA-211ENST00000468027 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
PTMA-211ENST00000468027 SERPINB2P05120 415 aa16.97■□□□□ 0.31
PTMA-211ENST00000468027 PROSER3Q2NL68 480 aa16.97■□□□□ 0.31
PTMA-211ENST00000468027 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
PTMA-211ENST00000468027 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
PTMA-211ENST00000468027 LAMB2P55268 1798 aa16.97■□□□□ 0.31
PTMA-211ENST00000468027 HLFQ16534 295 aa16.96■□□□□ 0.31
PTMA-211ENST00000468027 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
PTMA-211ENST00000468027 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms