RNA–Protein interactions for RNA: ENST00000467837.5

NCSTN-211, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 726 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-211ENST00000467837 AK7Q96M32 723 aa21.17■□□□□ 0.98
NCSTN-211ENST00000467837 GIGYF1O75420 1035 aaPredicted RBP21.16■□□□□ 0.98
NCSTN-211ENST00000467837 INTS5Q6P9B9 1019 aaKnown RBP21.16■□□□□ 0.98
NCSTN-211ENST00000467837 TFCP2L1Q9NZI6 479 aa21.16■□□□□ 0.98
NCSTN-211ENST00000467837 LAS1LQ9Y4W2 734 aaKnown RBP21.16■□□□□ 0.98
NCSTN-211ENST00000467837 GNPATO15228 680 aa21.15■□□□□ 0.98
NCSTN-211ENST00000467837 TEX13AQ9BXU3 409 aaPredicted RBP21.15■□□□□ 0.98
NCSTN-211ENST00000467837 PDGFDQ9GZP0 370 aaPredicted RBP21.15■□□□□ 0.98
NCSTN-211ENST00000467837 CCDC87Q9NVE4 849 aa21.15■□□□□ 0.98
NCSTN-211ENST00000467837 ZBTB1Q9Y2K1 713 aa21.15■□□□□ 0.98
NCSTN-211ENST00000467837 SSFA2P28290 1259 aa21.14■□□□□ 0.97
NCSTN-211ENST00000467837 SOS1Q07889 1333 aaPredicted RBP21.13■□□□□ 0.97
NCSTN-211ENST00000467837 SCN7AQ01118 1682 aa21.13■□□□□ 0.97
NCSTN-211ENST00000467837 STARD3NLO95772 234 aa21.13■□□□□ 0.97
NCSTN-211ENST00000467837 KRT24Q2M2I5 525 aa21.13■□□□□ 0.97
NCSTN-211ENST00000467837 SPINK5Q9NQ38 1064 aaPredicted RBP21.13■□□□□ 0.97
NCSTN-211ENST00000467837 USP16Q9Y5T5 823 aa21.13■□□□□ 0.97
NCSTN-211ENST00000467837 LRP5O75197 1615 aa21.12■□□□□ 0.97
NCSTN-211ENST00000467837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.12■□□□□ 0.97
NCSTN-211ENST00000467837 RPS6KA4O75676 772 aa21.12■□□□□ 0.97
NCSTN-211ENST00000467837 TSR2Q969E8 191 aaKnown RBP21.12■□□□□ 0.97
NCSTN-211ENST00000467837 FANCIQ9NVI1 1328 aa21.11■□□□□ 0.97
NCSTN-211ENST00000467837 BCORQ6W2J9 1755 aa21.11■□□□□ 0.97
NCSTN-211ENST00000467837 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
NCSTN-211ENST00000467837 COL23A1Q86Y22 540 aaPredicted RBP21.11■□□□□ 0.97
NCSTN-211ENST00000467837 COL15A1P39059 1388 aa21.1■□□□□ 0.97
NCSTN-211ENST00000467837 HOXB7P09629 217 aa21.1■□□□□ 0.97
NCSTN-211ENST00000467837 ADRA2BP18089 450 aa21.1■□□□□ 0.97
NCSTN-211ENST00000467837 FLAD1Q8NFF5 587 aa21.1■□□□□ 0.97
NCSTN-211ENST00000467837 RTCBQ9Y3I0 505 aaKnown RBP21.1■□□□□ 0.97
NCSTN-211ENST00000467837 PHF14O94880 888 aa21.09■□□□□ 0.97
NCSTN-211ENST00000467837 A1BGP04217 495 aa21.08■□□□□ 0.97
NCSTN-211ENST00000467837 NBPF26B4DH59 902 aa21.07■□□□□ 0.96
NCSTN-211ENST00000467837 EIF5P55010 431 aaKnown RBP21.07■□□□□ 0.96
NCSTN-211ENST00000467837 NBPF10Q6P3W6 841 aaKnown RBP21.07■□□□□ 0.96
NCSTN-211ENST00000467837 NBPF15Q8N660 670 aa21.07■□□□□ 0.96
NCSTN-211ENST00000467837 ERBB4Q15303 1308 aa21.06■□□□□ 0.96
NCSTN-211ENST00000467837 CANXP27824 592 aaKnown RBP21.06■□□□□ 0.96
NCSTN-211ENST00000467837 IL6STP40189 918 aaPredicted RBP21.06■□□□□ 0.96
NCSTN-211ENST00000467837 C8orf58Q8NAV2 365 aa21.06■□□□□ 0.96
NCSTN-211ENST00000467837 HNRNPUQ00839 825 aaKnown RBP eCLIP21.05■□□□□ 0.96
NCSTN-211ENST00000467837 GOLGA2Q08379 1002 aa21.05■□□□□ 0.96
NCSTN-211ENST00000467837 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
NCSTN-211ENST00000467837 ARHGEF1Q92888 912 aaKnown RBP21.05■□□□□ 0.96
NCSTN-211ENST00000467837 PIP4K2AP48426 406 aaPredicted RBP21.04■□□□□ 0.96
NCSTN-211ENST00000467837 TRAPPC3LQ5T215 181 aa21.04■□□□□ 0.96
NCSTN-211ENST00000467837 TSPYL6Q8N831 410 aa21.04■□□□□ 0.96
NCSTN-211ENST00000467837 SLC16A10Q8TF71 515 aa21.04■□□□□ 0.96
NCSTN-211ENST00000467837 MYH16Q9H6N6 1097 aa21.04■□□□□ 0.96
NCSTN-211ENST00000467837 USP42Q9H9J4 1324 aaKnown RBP21.04■□□□□ 0.96
NCSTN-211ENST00000467837 ZBTB7AO95365 584 aa21.03■□□□□ 0.96
NCSTN-211ENST00000467837 PDIA6Q15084 440 aa21.03■□□□□ 0.96
NCSTN-211ENST00000467837 LRP10Q7Z4F1 713 aa21.03■□□□□ 0.96
NCSTN-211ENST00000467837 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
NCSTN-211ENST00000467837 E9PSI1 815 aa21.02■□□□□ 0.96
NCSTN-211ENST00000467837 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
NCSTN-211ENST00000467837 ZBED9Q6R2W3 1325 aa21.02■□□□□ 0.95
NCSTN-211ENST00000467837 HDGFL1Q5TGJ6 251 aa21.01■□□□□ 0.95
NCSTN-211ENST00000467837 TRMT2AQ8IZ69 625 aaKnown RBP21.01■□□□□ 0.95
NCSTN-211ENST00000467837 CDCA7LQ96GN5 454 aa21.01■□□□□ 0.95
NCSTN-211ENST00000467837 SGIP1Q9BQI5 828 aa21.01■□□□□ 0.95
NCSTN-211ENST00000467837 EIF2S2P20042 333 aaKnown RBP21■□□□□ 0.95
NCSTN-211ENST00000467837 PROSER3Q2NL68 480 aa21■□□□□ 0.95
NCSTN-211ENST00000467837 SRP68Q9UHB9 627 aaKnown RBP21■□□□□ 0.95
NCSTN-211ENST00000467837 NARFQ9UHQ1 456 aa21■□□□□ 0.95
NCSTN-211ENST00000467837 CACNA1FO60840 1977 aa20.99■□□□□ 0.95
NCSTN-211ENST00000467837 A0A087WZG4 1122 aa20.99■□□□□ 0.95
NCSTN-211ENST00000467837 ELL2O00472 640 aaPredicted RBP20.99■□□□□ 0.95
NCSTN-211ENST00000467837 MSH5O43196 834 aa20.99■□□□□ 0.95
NCSTN-211ENST00000467837 GYS1P13807 737 aa20.99■□□□□ 0.95
NCSTN-211ENST00000467837 RFC4P35249 363 aa20.99■□□□□ 0.95
NCSTN-211ENST00000467837 PTGER2P43116 358 aa20.99■□□□□ 0.95
NCSTN-211ENST00000467837 EXOSC9Q06265 439 aaKnown RBP20.99■□□□□ 0.95
NCSTN-211ENST00000467837 TWISTNBQ3B726 338 aaPredicted RBP20.98■□□□□ 0.95
NCSTN-211ENST00000467837 NECTIN2Q92692 538 aa20.98■□□□□ 0.95
NCSTN-211ENST00000467837 CHPF2Q9P2E5 772 aa20.98■□□□□ 0.95
NCSTN-211ENST00000467837 NUP98P52948 1817 aa20.97■□□□□ 0.95
NCSTN-211ENST00000467837 MSL1Q68DK7 614 aa20.97■□□□□ 0.95
NCSTN-211ENST00000467837 BCL2L12Q9HB09 334 aa20.97■□□□□ 0.95
NCSTN-211ENST00000467837 SPON1Q9HCB6 807 aa20.97■□□□□ 0.95
NCSTN-211ENST00000467837 DDX21Q9NR30 783 aaKnown RBP eCLIP20.97■□□□□ 0.95
NCSTN-211ENST00000467837 ZNF330Q9Y3S2 320 aaPredicted RBP20.97■□□□□ 0.95
NCSTN-211ENST00000467837 CAMTA2O94983 1202 aa20.96■□□□□ 0.95
NCSTN-211ENST00000467837 ANXA1P04083 346 aa20.96■□□□□ 0.95
NCSTN-211ENST00000467837 MYL6BP14649 208 aa20.96■□□□□ 0.95
NCSTN-211ENST00000467837 USPL1Q5W0Q7 1092 aa20.96■□□□□ 0.95
NCSTN-211ENST00000467837 ATF5Q9Y2D1 282 aaPredicted RBP20.96■□□□□ 0.95
NCSTN-211ENST00000467837 VAMP4O75379 141 aa20.95■□□□□ 0.94
NCSTN-211ENST00000467837 DZIP3Q86Y13 1208 aaKnown RBP20.95■□□□□ 0.94
NCSTN-211ENST00000467837 DBF4Q9UBU7 674 aaPredicted RBP20.95■□□□□ 0.94
NCSTN-211ENST00000467837 TBC1D2BQ9UPU7 963 aa20.95■□□□□ 0.94
NCSTN-211ENST00000467837 NRXN2Q9P2S2 1712 aa20.95■□□□□ 0.94
NCSTN-211ENST00000467837 ANKRD36CQ5JPF3 1778 aa20.95■□□□□ 0.94
NCSTN-211ENST00000467837 ZPR1O75312 459 aa20.94■□□□□ 0.94
NCSTN-211ENST00000467837 FKBP8Q14318 412 aa20.94■□□□□ 0.94
NCSTN-211ENST00000467837 ARFGEF2Q9Y6D5 1785 aa20.94■□□□□ 0.94
NCSTN-211ENST00000467837 AFDNP55196 1824 aaKnown RBP20.93■□□□□ 0.94
NCSTN-211ENST00000467837 RGL2O15211 777 aa20.93■□□□□ 0.94
NCSTN-211ENST00000467837 TTLL7Q6ZT98 887 aa20.93■□□□□ 0.94
NCSTN-211ENST00000467837 CCDC30Q5VVM6 783 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms