RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ARHGEF1Q92888 912 aaKnown RBP17.79■□□□□ 0.44
SSBP1-206ENST00000467681 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
SSBP1-206ENST00000467681 ZNF831Q5JPB2 1677 aa17.79■□□□□ 0.44
SSBP1-206ENST00000467681 PRAMEF22A3QJZ6 481 aa17.78■□□□□ 0.44
SSBP1-206ENST00000467681 A1BGP04217 495 aa17.78■□□□□ 0.44
SSBP1-206ENST00000467681 NGEFQ8N5V2 710 aa17.78■□□□□ 0.44
SSBP1-206ENST00000467681 C4BP0C0L5 1744 aa17.78■□□□□ 0.44
SSBP1-206ENST00000467681 C5P01031 1676 aa17.77■□□□□ 0.44
SSBP1-206ENST00000467681 MYH14Q7Z406 1995 aaKnown RBP17.77■□□□□ 0.44
SSBP1-206ENST00000467681 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
SSBP1-206ENST00000467681 IFT57Q9NWB7 429 aa17.77■□□□□ 0.44
SSBP1-206ENST00000467681 PTGER2P43116 358 aa17.76■□□□□ 0.43
SSBP1-206ENST00000467681 GNAI1P63096 354 aa17.76■□□□□ 0.43
SSBP1-206ENST00000467681 SGIP1Q9BQI5 828 aa17.76■□□□□ 0.43
SSBP1-206ENST00000467681 ZBTB1Q9Y2K1 713 aa17.76■□□□□ 0.43
SSBP1-206ENST00000467681 SALL2Q9Y467 1007 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-206ENST00000467681 SOS1Q07889 1333 aaPredicted RBP17.75■□□□□ 0.43
SSBP1-206ENST00000467681 RFC4P35249 363 aa17.75■□□□□ 0.43
SSBP1-206ENST00000467681 EIF5P55010 431 aaKnown RBP17.75■□□□□ 0.43
SSBP1-206ENST00000467681 WDR63Q8IWG1 891 aa17.74■□□□□ 0.43
SSBP1-206ENST00000467681 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
SSBP1-206ENST00000467681 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
SSBP1-206ENST00000467681 IL6STP40189 918 aaPredicted RBP17.73■□□□□ 0.43
SSBP1-206ENST00000467681 IL16Q14005 1332 aa17.72■□□□□ 0.43
SSBP1-206ENST00000467681 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
SSBP1-206ENST00000467681 A0A087WZG4 1122 aa17.72■□□□□ 0.43
SSBP1-206ENST00000467681 NBPF26B4DH59 902 aa17.72■□□□□ 0.43
SSBP1-206ENST00000467681 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
SSBP1-206ENST00000467681 NBPF10Q6P3W6 841 aaKnown RBP17.72■□□□□ 0.43
SSBP1-206ENST00000467681 NLGN1Q8N2Q7 840 aa17.72■□□□□ 0.43
SSBP1-206ENST00000467681 NBPF15Q8N660 670 aa17.72■□□□□ 0.43
SSBP1-206ENST00000467681 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
SSBP1-206ENST00000467681 POLD1P28340 1107 aa17.71■□□□□ 0.43
SSBP1-206ENST00000467681 NARFQ9UHQ1 456 aa17.71■□□□□ 0.43
SSBP1-206ENST00000467681 TJP1Q07157 1748 aa17.71■□□□□ 0.43
SSBP1-206ENST00000467681 QSER1Q2KHR3 1735 aa17.7■□□□□ 0.42
SSBP1-206ENST00000467681 CICQ96RK0 1608 aaPredicted RBP17.7■□□□□ 0.42
SSBP1-206ENST00000467681 ZPR1O75312 459 aa17.7■□□□□ 0.42
SSBP1-206ENST00000467681 GYS1P13807 737 aa17.7■□□□□ 0.42
SSBP1-206ENST00000467681 KRT24Q2M2I5 525 aa17.7■□□□□ 0.42
SSBP1-206ENST00000467681 SRP68Q9UHB9 627 aaKnown RBP17.7■□□□□ 0.42
SSBP1-206ENST00000467681 COL5A3P25940 1745 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-206ENST00000467681 EIF2S2P20042 333 aaKnown RBP17.69■□□□□ 0.42
SSBP1-206ENST00000467681 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-206ENST00000467681 DUSP27Q5VZP5 1158 aa17.69■□□□□ 0.42
SSBP1-206ENST00000467681 NPM2Q86SE8 214 aaKnown RBP17.69■□□□□ 0.42
SSBP1-206ENST00000467681 ARXQ96QS3 562 aa17.69■□□□□ 0.42
SSBP1-206ENST00000467681 PPP1R1BQ9UD71 204 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-206ENST00000467681 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
SSBP1-206ENST00000467681 TUBGCP6Q96RT7 1819 aa17.68■□□□□ 0.42
SSBP1-206ENST00000467681 HOXB7P09629 217 aa17.68■□□□□ 0.42
SSBP1-206ENST00000467681 TBC1D2BQ9UPU7 963 aa17.68■□□□□ 0.42
SSBP1-206ENST00000467681 KDM3BQ7LBC6 1761 aa17.67■□□□□ 0.42
SSBP1-206ENST00000467681 FKBP8Q14318 412 aa17.67■□□□□ 0.42
SSBP1-206ENST00000467681 USPL1Q5W0Q7 1092 aa17.67■□□□□ 0.42
SSBP1-206ENST00000467681 ZNF330Q9Y3S2 320 aaPredicted RBP17.67■□□□□ 0.42
SSBP1-206ENST00000467681 ERBB4Q15303 1308 aa17.67■□□□□ 0.42
SSBP1-206ENST00000467681 COL15A1P39059 1388 aa17.66■□□□□ 0.42
SSBP1-206ENST00000467681 PDIA6Q15084 440 aa17.66■□□□□ 0.42
SSBP1-206ENST00000467681 C8orf58Q8NAV2 365 aa17.66■□□□□ 0.42
SSBP1-206ENST00000467681 BCL2L12Q9HB09 334 aa17.66■□□□□ 0.42
SSBP1-206ENST00000467681 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
SSBP1-206ENST00000467681 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
SSBP1-206ENST00000467681 MMP10P09238 476 aa17.65■□□□□ 0.42
SSBP1-206ENST00000467681 TM4SF1P30408 202 aa17.65■□□□□ 0.42
SSBP1-206ENST00000467681 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
SSBP1-206ENST00000467681 SPINK5Q9NQ38 1064 aaPredicted RBP17.65■□□□□ 0.42
SSBP1-206ENST00000467681 CAMTA2O94983 1202 aa17.64■□□□□ 0.41
SSBP1-206ENST00000467681 DZIP3Q86Y13 1208 aaKnown RBP17.64■□□□□ 0.41
SSBP1-206ENST00000467681 LRP5O75197 1615 aa17.63■□□□□ 0.41
SSBP1-206ENST00000467681 MYL6BP14649 208 aa17.63■□□□□ 0.41
SSBP1-206ENST00000467681 GOLGA2Q08379 1002 aa17.63■□□□□ 0.41
SSBP1-206ENST00000467681 LRP10Q7Z4F1 713 aa17.63■□□□□ 0.41
SSBP1-206ENST00000467681 NECTIN2Q92692 538 aa17.63■□□□□ 0.41
SSBP1-206ENST00000467681 DDX21Q9NR30 783 aaKnown RBP eCLIP17.63■□□□□ 0.41
SSBP1-206ENST00000467681 PROSER3Q2NL68 480 aa17.62■□□□□ 0.41
SSBP1-206ENST00000467681 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
SSBP1-206ENST00000467681 CLEC4GQ6UXB4 293 aa17.62■□□□□ 0.41
SSBP1-206ENST00000467681 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
SSBP1-206ENST00000467681 SYT17Q9BSW7 474 aa17.62■□□□□ 0.41
SSBP1-206ENST00000467681 CHMP4AQ9BY43 222 aa17.62■□□□□ 0.41
SSBP1-206ENST00000467681 MYH16Q9H6N6 1097 aa17.62■□□□□ 0.41
SSBP1-206ENST00000467681 RGL2O15211 777 aa17.61■□□□□ 0.41
SSBP1-206ENST00000467681 NFIXQ14938 502 aa17.61■□□□□ 0.41
SSBP1-206ENST00000467681 FHDC1Q9C0D6 1143 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-206ENST00000467681 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
SSBP1-206ENST00000467681 ERVV-1B6SEH8 477 aa17.6■□□□□ 0.41
SSBP1-206ENST00000467681 ANXA1P04083 346 aa17.6■□□□□ 0.41
SSBP1-206ENST00000467681 TTLL7Q6ZT98 887 aa17.6■□□□□ 0.41
SSBP1-206ENST00000467681 DBF4Q9UBU7 674 aaPredicted RBP17.6■□□□□ 0.41
SSBP1-206ENST00000467681 FANCIQ9NVI1 1328 aa17.6■□□□□ 0.41
SSBP1-206ENST00000467681 DDR1Q08345 913 aa17.59■□□□□ 0.41
SSBP1-206ENST00000467681 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
SSBP1-206ENST00000467681 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
SSBP1-206ENST00000467681 COL24A1Q17RW2 1714 aa17.58■□□□□ 0.41
SSBP1-206ENST00000467681 POLRMTO00411 1230 aaKnown RBP17.58■□□□□ 0.4
SSBP1-206ENST00000467681 VAMP4O75379 141 aa17.58■□□□□ 0.4
SSBP1-206ENST00000467681 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
SSBP1-206ENST00000467681 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
SSBP1-206ENST00000467681 CCDC30Q5VVM6 783 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms