RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 WWC1Q8IX03 1113 aa14.47□□□□□ -0.09
MSH5-212ENST00000467319 FLAD1Q8NFF5 587 aa14.47□□□□□ -0.09
MSH5-212ENST00000467319 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
MSH5-212ENST00000467319 BCORQ6W2J9 1755 aa14.47□□□□□ -0.09
MSH5-212ENST00000467319 PRAMEF22A3QJZ6 481 aa14.46□□□□□ -0.09
MSH5-212ENST00000467319 SNRPA1P09661 255 aaKnown RBP14.46□□□□□ -0.09
MSH5-212ENST00000467319 CALD1Q05682 793 aaKnown RBP14.46□□□□□ -0.09
MSH5-212ENST00000467319 NGEFQ8N5V2 710 aa14.46□□□□□ -0.09
MSH5-212ENST00000467319 SLC16A10Q8TF71 515 aa14.46□□□□□ -0.09
MSH5-212ENST00000467319 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
MSH5-212ENST00000467319 SGIP1Q9BQI5 828 aa14.46□□□□□ -0.09
MSH5-212ENST00000467319 TEX13AQ9BXU3 409 aaPredicted RBP14.46□□□□□ -0.09
MSH5-212ENST00000467319 MTFR1LQ9H019 292 aa14.46□□□□□ -0.09
MSH5-212ENST00000467319 ZBTB1Q9Y2K1 713 aa14.46□□□□□ -0.09
MSH5-212ENST00000467319 COL15A1P39059 1388 aa14.46□□□□□ -0.1
MSH5-212ENST00000467319 IL16Q14005 1332 aa14.45□□□□□ -0.1
MSH5-212ENST00000467319 ZNF521Q96K83 1311 aa14.45□□□□□ -0.1
MSH5-212ENST00000467319 GIGYF1O75420 1035 aaPredicted RBP14.45□□□□□ -0.1
MSH5-212ENST00000467319 STARD3NLO95772 234 aa14.45□□□□□ -0.1
MSH5-212ENST00000467319 SMIM5Q71RC9 77 aa14.45□□□□□ -0.1
MSH5-212ENST00000467319 RTCBQ9Y3I0 505 aaKnown RBP14.45□□□□□ -0.1
MSH5-212ENST00000467319 PHF14O94880 888 aa14.44□□□□□ -0.1
MSH5-212ENST00000467319 ZBTB7AO95365 584 aa14.44□□□□□ -0.1
MSH5-212ENST00000467319 PTGER2P43116 358 aa14.44□□□□□ -0.1
MSH5-212ENST00000467319 SENP3-EIF4A1A0A087X0R7 540 aa14.43□□□□□ -0.1
MSH5-212ENST00000467319 MBIPQ9NS73 344 aa14.43□□□□□ -0.1
MSH5-212ENST00000467319 USP16Q9Y5T5 823 aa14.43□□□□□ -0.1
MSH5-212ENST00000467319 USP42Q9H9J4 1324 aaKnown RBP14.42□□□□□ -0.1
MSH5-212ENST00000467319 EIF5P55010 431 aaKnown RBP14.42□□□□□ -0.1
MSH5-212ENST00000467319 GNAI1P63096 354 aa14.42□□□□□ -0.1
MSH5-212ENST00000467319 SPON1Q9HCB6 807 aa14.42□□□□□ -0.1
MSH5-212ENST00000467319 IL6STP40189 918 aaPredicted RBP14.41□□□□□ -0.1
MSH5-212ENST00000467319 KRT24Q2M2I5 525 aa14.41□□□□□ -0.1
MSH5-212ENST00000467319 ARHGEF1Q92888 912 aaKnown RBP14.41□□□□□ -0.1
MSH5-212ENST00000467319 ERBB4Q15303 1308 aa14.41□□□□□ -0.1
MSH5-212ENST00000467319 NBPF26B4DH59 902 aa14.4□□□□□ -0.1
MSH5-212ENST00000467319 A1BGP04217 495 aa14.4□□□□□ -0.1
MSH5-212ENST00000467319 HOXB7P09629 217 aa14.4□□□□□ -0.1
MSH5-212ENST00000467319 TRAPPC3LQ5T215 181 aa14.4□□□□□ -0.1
MSH5-212ENST00000467319 NBPF10Q6P3W6 841 aaKnown RBP14.4□□□□□ -0.1
MSH5-212ENST00000467319 WDR63Q8IWG1 891 aa14.4□□□□□ -0.1
MSH5-212ENST00000467319 NBPF15Q8N660 670 aa14.4□□□□□ -0.1
MSH5-212ENST00000467319 LAS1LQ9Y4W2 734 aaKnown RBP14.39□□□□□ -0.11
MSH5-212ENST00000467319 FANCIQ9NVI1 1328 aa14.39□□□□□ -0.11
MSH5-212ENST00000467319 GYS1P13807 737 aa14.38□□□□□ -0.11
MSH5-212ENST00000467319 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
MSH5-212ENST00000467319 MSL1Q68DK7 614 aa14.38□□□□□ -0.11
MSH5-212ENST00000467319 LRP10Q7Z4F1 713 aa14.38□□□□□ -0.11
MSH5-212ENST00000467319 TSR2Q969E8 191 aaKnown RBP14.38□□□□□ -0.11
MSH5-212ENST00000467319 SRP68Q9UHB9 627 aaKnown RBP14.38□□□□□ -0.11
MSH5-212ENST00000467319 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
MSH5-212ENST00000467319 NRXN2Q9P2S2 1712 aa14.38□□□□□ -0.11
MSH5-212ENST00000467319 MSH5O43196 834 aa14.37□□□□□ -0.11
MSH5-212ENST00000467319 RFC4P35249 363 aa14.37□□□□□ -0.11
MSH5-212ENST00000467319 PIP4K2AP48426 406 aaPredicted RBP14.37□□□□□ -0.11
MSH5-212ENST00000467319 NARFQ9UHQ1 456 aa14.37□□□□□ -0.11
MSH5-212ENST00000467319 KIF13BQ9NQT8 1826 aa14.36□□□□□ -0.11
MSH5-212ENST00000467319 A0A087WZG4 1122 aa14.36□□□□□ -0.11
MSH5-212ENST00000467319 PDIA6Q15084 440 aa14.36□□□□□ -0.11
MSH5-212ENST00000467319 DUSP27Q5VZP5 1158 aa14.36□□□□□ -0.11
MSH5-212ENST00000467319 BCL2L12Q9HB09 334 aa14.36□□□□□ -0.11
MSH5-212ENST00000467319 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
MSH5-212ENST00000467319 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
MSH5-212ENST00000467319 RGL2O15211 777 aa14.35□□□□□ -0.11
MSH5-212ENST00000467319 C8orf58Q8NAV2 365 aa14.35□□□□□ -0.11
MSH5-212ENST00000467319 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
MSH5-212ENST00000467319 C10orf71Q711Q0 1435 aa14.34□□□□□ -0.11
MSH5-212ENST00000467319 CAMTA2O94983 1202 aa14.34□□□□□ -0.11
MSH5-212ENST00000467319 FKBP8Q14318 412 aa14.34□□□□□ -0.11
MSH5-212ENST00000467319 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
MSH5-212ENST00000467319 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
MSH5-212ENST00000467319 NLGN1Q8N2Q7 840 aa14.34□□□□□ -0.11
MSH5-212ENST00000467319 POLD1P28340 1107 aa14.33□□□□□ -0.12
MSH5-212ENST00000467319 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
MSH5-212ENST00000467319 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
MSH5-212ENST00000467319 ARXQ96QS3 562 aa14.33□□□□□ -0.12
MSH5-212ENST00000467319 MYH16Q9H6N6 1097 aa14.33□□□□□ -0.12
MSH5-212ENST00000467319 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
MSH5-212ENST00000467319 ANKRD36CQ5JPF3 1778 aa14.32□□□□□ -0.12
MSH5-212ENST00000467319 AFDNP55196 1824 aaKnown RBP14.32□□□□□ -0.12
MSH5-212ENST00000467319 ZPR1O75312 459 aa14.32□□□□□ -0.12
MSH5-212ENST00000467319 MMP10P09238 476 aa14.32□□□□□ -0.12
MSH5-212ENST00000467319 DDR1Q08345 913 aa14.32□□□□□ -0.12
MSH5-212ENST00000467319 TSPYL6Q8N831 410 aa14.32□□□□□ -0.12
MSH5-212ENST00000467319 DDX21Q9NR30 783 aaKnown RBP eCLIP14.32□□□□□ -0.12
MSH5-212ENST00000467319 CHPF2Q9P2E5 772 aa14.32□□□□□ -0.12
MSH5-212ENST00000467319 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
MSH5-212ENST00000467319 EIF2S2P20042 333 aaKnown RBP14.31□□□□□ -0.12
MSH5-212ENST00000467319 TM4SF1P30408 202 aa14.31□□□□□ -0.12
MSH5-212ENST00000467319 TBC1D2BQ9UPU7 963 aa14.31□□□□□ -0.12
MSH5-212ENST00000467319 ARFGEF2Q9Y6D5 1785 aa14.3□□□□□ -0.12
MSH5-212ENST00000467319 NUP98P52948 1817 aa14.3□□□□□ -0.12
MSH5-212ENST00000467319 E9PSI1 815 aa14.3□□□□□ -0.12
MSH5-212ENST00000467319 POLRMTO00411 1230 aaKnown RBP14.3□□□□□ -0.12
MSH5-212ENST00000467319 MYL6BP14649 208 aa14.3□□□□□ -0.12
MSH5-212ENST00000467319 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
MSH5-212ENST00000467319 NFIXQ14938 502 aa14.3□□□□□ -0.12
MSH5-212ENST00000467319 MAP3K15Q6ZN16 1313 aa14.3□□□□□ -0.12
MSH5-212ENST00000467319 ANXA1P04083 346 aa14.29□□□□□ -0.12
MSH5-212ENST00000467319 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms