RNA–Protein interactions for RNA: ENST00000466912.5

PTPN20-211, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 3

Gene PTPN20, Length 446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-211ENST00000466912 NGEFQ8N5V2 710 aa13.1□□□□□ -0.31
PTPN20-211ENST00000466912 MBIPQ9NS73 344 aa13.1□□□□□ -0.31
PTPN20-211ENST00000466912 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
PTPN20-211ENST00000466912 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-211ENST00000466912 LAS1LQ9Y4W2 734 aaKnown RBP13.1□□□□□ -0.31
PTPN20-211ENST00000466912 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
PTPN20-211ENST00000466912 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
PTPN20-211ENST00000466912 C5P01031 1676 aa13.09□□□□□ -0.31
PTPN20-211ENST00000466912 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
PTPN20-211ENST00000466912 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
PTPN20-211ENST00000466912 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
PTPN20-211ENST00000466912 RTCBQ9Y3I0 505 aaKnown RBP13.09□□□□□ -0.31
PTPN20-211ENST00000466912 CICQ96RK0 1608 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-211ENST00000466912 ZNF521Q96K83 1311 aa13.09□□□□□ -0.31
PTPN20-211ENST00000466912 PHF14O94880 888 aa13.08□□□□□ -0.32
PTPN20-211ENST00000466912 HOXD11P31277 338 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-211ENST00000466912 GNAI1P63096 354 aa13.08□□□□□ -0.32
PTPN20-211ENST00000466912 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
PTPN20-211ENST00000466912 WDR63Q8IWG1 891 aa13.08□□□□□ -0.32
PTPN20-211ENST00000466912 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
PTPN20-211ENST00000466912 SOS1Q07889 1333 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-211ENST00000466912 IL16Q14005 1332 aa13.08□□□□□ -0.32
PTPN20-211ENST00000466912 TJP1Q07157 1748 aa13.08□□□□□ -0.32
PTPN20-211ENST00000466912 TAF1LQ8IZX4 1826 aa13.07□□□□□ -0.32
PTPN20-211ENST00000466912 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
PTPN20-211ENST00000466912 A1BGP04217 495 aa13.07□□□□□ -0.32
PTPN20-211ENST00000466912 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
PTPN20-211ENST00000466912 SLC16A10Q8TF71 515 aa13.07□□□□□ -0.32
PTPN20-211ENST00000466912 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
PTPN20-211ENST00000466912 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
PTPN20-211ENST00000466912 MTFR1LQ9H019 292 aa13.06□□□□□ -0.32
PTPN20-211ENST00000466912 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-211ENST00000466912 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-211ENST00000466912 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
PTPN20-211ENST00000466912 CASZ1Q86V15 1759 aa13.05□□□□□ -0.32
PTPN20-211ENST00000466912 NBPF26B4DH59 902 aa13.05□□□□□ -0.32
PTPN20-211ENST00000466912 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-211ENST00000466912 PTGER2P43116 358 aa13.05□□□□□ -0.32
PTPN20-211ENST00000466912 NBPF10Q6P3W6 841 aaKnown RBP13.05□□□□□ -0.32
PTPN20-211ENST00000466912 NBPF15Q8N660 670 aa13.05□□□□□ -0.32
PTPN20-211ENST00000466912 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
PTPN20-211ENST00000466912 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
PTPN20-211ENST00000466912 PIP4K2AP48426 406 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-211ENST00000466912 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
PTPN20-211ENST00000466912 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
PTPN20-211ENST00000466912 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-211ENST00000466912 HOXB7P09629 217 aa13.03□□□□□ -0.32
PTPN20-211ENST00000466912 RFC4P35249 363 aa13.03□□□□□ -0.32
PTPN20-211ENST00000466912 PDIA6Q15084 440 aa13.03□□□□□ -0.32
PTPN20-211ENST00000466912 DUSP27Q5VZP5 1158 aa13.03□□□□□ -0.32
PTPN20-211ENST00000466912 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
PTPN20-211ENST00000466912 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
PTPN20-211ENST00000466912 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.32
PTPN20-211ENST00000466912 GYS1P13807 737 aa13.02□□□□□ -0.33
PTPN20-211ENST00000466912 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.33
PTPN20-211ENST00000466912 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
PTPN20-211ENST00000466912 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.33
PTPN20-211ENST00000466912 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
PTPN20-211ENST00000466912 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
PTPN20-211ENST00000466912 COL15A1P39059 1388 aa13.02□□□□□ -0.33
PTPN20-211ENST00000466912 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.33
PTPN20-211ENST00000466912 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.33
PTPN20-211ENST00000466912 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
PTPN20-211ENST00000466912 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
PTPN20-211ENST00000466912 NARFQ9UHQ1 456 aa13.01□□□□□ -0.33
PTPN20-211ENST00000466912 ERBB4Q15303 1308 aa13.01□□□□□ -0.33
PTPN20-211ENST00000466912 A0A087WZG4 1122 aa13□□□□□ -0.33
PTPN20-211ENST00000466912 ELL2O00472 640 aaPredicted RBP13□□□□□ -0.33
PTPN20-211ENST00000466912 PROSER3Q2NL68 480 aa13□□□□□ -0.33
PTPN20-211ENST00000466912 USPL1Q5W0Q7 1092 aa13□□□□□ -0.33
PTPN20-211ENST00000466912 TBC1D2BQ9UPU7 963 aa13□□□□□ -0.33
PTPN20-211ENST00000466912 CAMTA2O94983 1202 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 FKBP8Q14318 412 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 HDGFL1Q5TGJ6 251 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 NLGN1Q8N2Q7 840 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
PTPN20-211ENST00000466912 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
PTPN20-211ENST00000466912 E9PSI1 815 aa12.98□□□□□ -0.33
PTPN20-211ENST00000466912 ZPR1O75312 459 aa12.98□□□□□ -0.33
PTPN20-211ENST00000466912 ANXA1P04083 346 aa12.98□□□□□ -0.33
PTPN20-211ENST00000466912 MYL6BP14649 208 aa12.98□□□□□ -0.33
PTPN20-211ENST00000466912 DZIP3Q86Y13 1208 aaKnown RBP12.98□□□□□ -0.33
PTPN20-211ENST00000466912 TRMT2AQ8IZ69 625 aaKnown RBP12.98□□□□□ -0.33
PTPN20-211ENST00000466912 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTPN20-211ENST00000466912 CHPF2Q9P2E5 772 aa12.98□□□□□ -0.33
PTPN20-211ENST00000466912 VAMP4O75379 141 aa12.97□□□□□ -0.33
PTPN20-211ENST00000466912 POLD1P28340 1107 aa12.97□□□□□ -0.33
PTPN20-211ENST00000466912 TM4SF1P30408 202 aa12.97□□□□□ -0.33
PTPN20-211ENST00000466912 EXOSC9Q06265 439 aaKnown RBP12.97□□□□□ -0.33
PTPN20-211ENST00000466912 TWISTNBQ3B726 338 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-211ENST00000466912 TTLL7Q6ZT98 887 aa12.97□□□□□ -0.33
PTPN20-211ENST00000466912 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-211ENST00000466912 MMP10P09238 476 aa12.96□□□□□ -0.33
PTPN20-211ENST00000466912 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTPN20-211ENST00000466912 ARXQ96QS3 562 aa12.96□□□□□ -0.33
PTPN20-211ENST00000466912 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms