RNA–Protein interactions for RNA: ENST00000466884.1

COL2A1-204, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 478 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-204ENST00000466884 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
COL2A1-204ENST00000466884 CARD11Q9BXL7 1154 aa11.53□□□□□ -0.56
COL2A1-204ENST00000466884 RTCBQ9Y3I0 505 aaKnown RBP11.53□□□□□ -0.56
COL2A1-204ENST00000466884 PARP3Q9Y6F1 533 aa11.53□□□□□ -0.56
COL2A1-204ENST00000466884 ITGB4P16144 1822 aa11.53□□□□□ -0.56
COL2A1-204ENST00000466884 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
COL2A1-204ENST00000466884 KIF13BQ9NQT8 1826 aa11.52□□□□□ -0.57
COL2A1-204ENST00000466884 ITPK1Q13572 414 aa11.52□□□□□ -0.57
COL2A1-204ENST00000466884 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
COL2A1-204ENST00000466884 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
COL2A1-204ENST00000466884 PIM2Q9P1W9 311 aa11.52□□□□□ -0.57
COL2A1-204ENST00000466884 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
COL2A1-204ENST00000466884 KCNA3P22001 575 aa11.51□□□□□ -0.57
COL2A1-204ENST00000466884 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
COL2A1-204ENST00000466884 HSP90AB2PQ58FF8 381 aa11.51□□□□□ -0.57
COL2A1-204ENST00000466884 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
COL2A1-204ENST00000466884 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
COL2A1-204ENST00000466884 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
COL2A1-204ENST00000466884 SPG7Q9UQ90 795 aa11.51□□□□□ -0.57
COL2A1-204ENST00000466884 KIAA1551Q9HCM1 1747 aa11.51□□□□□ -0.57
COL2A1-204ENST00000466884 RFC4P35249 363 aa11.5□□□□□ -0.57
COL2A1-204ENST00000466884 DALRD3Q5D0E6 543 aaKnown RBP11.5□□□□□ -0.57
COL2A1-204ENST00000466884 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
COL2A1-204ENST00000466884 C10orf71Q711Q0 1435 aa11.5□□□□□ -0.57
COL2A1-204ENST00000466884 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
COL2A1-204ENST00000466884 GGNBP2Q9H3C7 697 aa11.49□□□□□ -0.57
COL2A1-204ENST00000466884 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
COL2A1-204ENST00000466884 FYB1O15117 783 aa11.48□□□□□ -0.57
COL2A1-204ENST00000466884 GYS1P13807 737 aa11.48□□□□□ -0.57
COL2A1-204ENST00000466884 VEGFAP15692 232 aaPredicted RBP11.48□□□□□ -0.57
COL2A1-204ENST00000466884 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
COL2A1-204ENST00000466884 INSRP06213 1382 aa11.48□□□□□ -0.57
COL2A1-204ENST00000466884 ARFGEF1Q9Y6D6 1849 aa11.47□□□□□ -0.57
COL2A1-204ENST00000466884 RC3H1Q5TC82 1133 aaKnown RBP11.47□□□□□ -0.57
COL2A1-204ENST00000466884 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
COL2A1-204ENST00000466884 PKD1L3Q7Z443 1732 aa11.46□□□□□ -0.57
COL2A1-204ENST00000466884 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.57
COL2A1-204ENST00000466884 RPS6KA4O75676 772 aa11.46□□□□□ -0.57
COL2A1-204ENST00000466884 SLC34A2O95436 690 aa11.46□□□□□ -0.57
COL2A1-204ENST00000466884 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
COL2A1-204ENST00000466884 CDAN1Q8IWY9 1227 aa11.46□□□□□ -0.57
COL2A1-204ENST00000466884 IFNL2Q8IZJ0 200 aa11.46□□□□□ -0.57
COL2A1-204ENST00000466884 BRCA1P38398 1863 aaKnown RBP11.46□□□□□ -0.58
COL2A1-204ENST00000466884 C4AP0C0L4 1744 aa11.46□□□□□ -0.58
COL2A1-204ENST00000466884 FLT4P35916 1363 aa11.45□□□□□ -0.58
COL2A1-204ENST00000466884 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
COL2A1-204ENST00000466884 PLCG2P16885 1265 aa11.45□□□□□ -0.58
COL2A1-204ENST00000466884 GLTPD2A6NH11 291 aa11.44□□□□□ -0.58
COL2A1-204ENST00000466884 ST18O60284 1047 aa11.44□□□□□ -0.58
COL2A1-204ENST00000466884 CHRNA5P30532 468 aa11.44□□□□□ -0.58
COL2A1-204ENST00000466884 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL2A1-204ENST00000466884 SBF1O95248 1867 aa11.44□□□□□ -0.58
COL2A1-204ENST00000466884 KIF24Q5T7B8 1368 aa11.43□□□□□ -0.58
COL2A1-204ENST00000466884 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
COL2A1-204ENST00000466884 PPM1GO15355 546 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-204ENST00000466884 PHKG2P15735 406 aa11.43□□□□□ -0.58
COL2A1-204ENST00000466884 SLC4A9Q96Q91 983 aa11.43□□□□□ -0.58
COL2A1-204ENST00000466884 CNTNAP4Q9C0A0 1308 aa11.42□□□□□ -0.58
COL2A1-204ENST00000466884 LMNB1P20700 586 aa11.42□□□□□ -0.58
COL2A1-204ENST00000466884 RASSF7Q02833 373 aa11.42□□□□□ -0.58
COL2A1-204ENST00000466884 ST20-MTHFSA0A0A6YYL1 179 aa11.41□□□□□ -0.58
COL2A1-204ENST00000466884 FKBP8Q14318 412 aa11.41□□□□□ -0.58
COL2A1-204ENST00000466884 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
COL2A1-204ENST00000466884 SRP68Q9UHB9 627 aaKnown RBP11.41□□□□□ -0.58
COL2A1-204ENST00000466884 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
COL2A1-204ENST00000466884 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
COL2A1-204ENST00000466884 ERVV-2B6SEH9 535 aa11.4□□□□□ -0.58
COL2A1-204ENST00000466884 DDR1Q08345 913 aa11.4□□□□□ -0.58
COL2A1-204ENST00000466884 TESK2Q96S53 571 aa11.4□□□□□ -0.58
COL2A1-204ENST00000466884 EYA1Q99502 592 aa11.4□□□□□ -0.58
COL2A1-204ENST00000466884 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
COL2A1-204ENST00000466884 TONSLQ96HA7 1378 aa11.4□□□□□ -0.59
COL2A1-204ENST00000466884 FOXN1O15353 648 aa11.39□□□□□ -0.59
COL2A1-204ENST00000466884 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
COL2A1-204ENST00000466884 KDRP35968 1356 aa11.39□□□□□ -0.59
COL2A1-204ENST00000466884 HSP90AB1P08238 724 aaKnown RBP11.38□□□□□ -0.59
COL2A1-204ENST00000466884 PYGBP11216 843 aa11.38□□□□□ -0.59
COL2A1-204ENST00000466884 TM4SF1P30408 202 aa11.38□□□□□ -0.59
COL2A1-204ENST00000466884 CABP4P57796 275 aa11.38□□□□□ -0.59
COL2A1-204ENST00000466884 WASHC2AQ641Q2 1341 aa11.37□□□□□ -0.59
COL2A1-204ENST00000466884 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
COL2A1-204ENST00000466884 POTECB2RU33 542 aa11.37□□□□□ -0.59
COL2A1-204ENST00000466884 POLRMTO00411 1230 aaKnown RBP11.37□□□□□ -0.59
COL2A1-204ENST00000466884 PTCD1O75127 700 aaKnown RBP11.37□□□□□ -0.59
COL2A1-204ENST00000466884 ZPR1O75312 459 aa11.37□□□□□ -0.59
COL2A1-204ENST00000466884 CRKLP46109 303 aaKnown RBP11.37□□□□□ -0.59
COL2A1-204ENST00000466884 CTCFP49711 727 aaPredicted RBP11.37□□□□□ -0.59
COL2A1-204ENST00000466884 TTLL6Q8N841 843 aa11.37□□□□□ -0.59
COL2A1-204ENST00000466884 OCEL1Q9H607 264 aa11.37□□□□□ -0.59
COL2A1-204ENST00000466884 COL5A3P25940 1745 aaPredicted RBP11.37□□□□□ -0.59
COL2A1-204ENST00000466884 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
COL2A1-204ENST00000466884 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
COL2A1-204ENST00000466884 NCAPD2Q15021 1401 aa11.36□□□□□ -0.59
COL2A1-204ENST00000466884 MYH14Q7Z406 1995 aaKnown RBP11.36□□□□□ -0.59
COL2A1-204ENST00000466884 CCDC88AQ3V6T2 1871 aa11.36□□□□□ -0.59
COL2A1-204ENST00000466884 DCAF8Q5TAQ9 597 aa11.35□□□□□ -0.59
COL2A1-204ENST00000466884 KIF20BQ96Q89 1820 aa11.35□□□□□ -0.59
COL2A1-204ENST00000466884 H0YIN7 160 aa11.34□□□□□ -0.59
COL2A1-204ENST00000466884 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
COL2A1-204ENST00000466884 PLEKHO1Q53GL0 409 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms