RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 QSER1Q2KHR3 1735 aa20.7■□□□□ 0.9
AGRN-204ENST00000466223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.69■□□□□ 0.9
AGRN-204ENST00000466223 RPS6KA4O75676 772 aa20.69■□□□□ 0.9
AGRN-204ENST00000466223 ZNF853P0CG23 659 aa20.69■□□□□ 0.9
AGRN-204ENST00000466223 PNPLA7Q6ZV29 1317 aa20.69■□□□□ 0.9
AGRN-204ENST00000466223 GIGYF1O75420 1035 aaPredicted RBP20.68■□□□□ 0.9
AGRN-204ENST00000466223 INTS5Q6P9B9 1019 aaKnown RBP20.68■□□□□ 0.9
AGRN-204ENST00000466223 SLC16A10Q8TF71 515 aa20.68■□□□□ 0.9
AGRN-204ENST00000466223 MBIPQ9NS73 344 aa20.68■□□□□ 0.9
AGRN-204ENST00000466223 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
AGRN-204ENST00000466223 UBR3Q6ZT12 1888 aa20.67■□□□□ 0.9
AGRN-204ENST00000466223 ADRA2BP18089 450 aa20.67■□□□□ 0.9
AGRN-204ENST00000466223 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
AGRN-204ENST00000466223 COL23A1Q86Y22 540 aaPredicted RBP20.67■□□□□ 0.9
AGRN-204ENST00000466223 TUBGCP6Q96RT7 1819 aa20.67■□□□□ 0.9
AGRN-204ENST00000466223 MYH14Q7Z406 1995 aaKnown RBP20.66■□□□□ 0.9
AGRN-204ENST00000466223 RFC4P35249 363 aa20.66■□□□□ 0.9
AGRN-204ENST00000466223 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
AGRN-204ENST00000466223 PDGFDQ9GZP0 370 aaPredicted RBP20.65■□□□□ 0.9
AGRN-204ENST00000466223 ZBTB1Q9Y2K1 713 aa20.65■□□□□ 0.9
AGRN-204ENST00000466223 A1BGP04217 495 aa20.64■□□□□ 0.89
AGRN-204ENST00000466223 MTFR1LQ9H019 292 aa20.64■□□□□ 0.89
AGRN-204ENST00000466223 A0A087WZG4 1122 aa20.63■□□□□ 0.89
AGRN-204ENST00000466223 ZBTB7AO95365 584 aa20.63■□□□□ 0.89
AGRN-204ENST00000466223 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
AGRN-204ENST00000466223 ARHGEF1Q92888 912 aaKnown RBP20.63■□□□□ 0.89
AGRN-204ENST00000466223 CHMP4AQ9BY43 222 aa20.63■□□□□ 0.89
AGRN-204ENST00000466223 MYH16Q9H6N6 1097 aa20.63■□□□□ 0.89
AGRN-204ENST00000466223 SPON1Q9HCB6 807 aa20.63■□□□□ 0.89
AGRN-204ENST00000466223 ZNF330Q9Y3S2 320 aaPredicted RBP20.63■□□□□ 0.89
AGRN-204ENST00000466223 CASZ1Q86V15 1759 aa20.62■□□□□ 0.89
AGRN-204ENST00000466223 HOXB7P09629 217 aa20.62■□□□□ 0.89
AGRN-204ENST00000466223 IL6STP40189 918 aaPredicted RBP20.62■□□□□ 0.89
AGRN-204ENST00000466223 GOLGA2Q08379 1002 aa20.62■□□□□ 0.89
AGRN-204ENST00000466223 SMIM5Q71RC9 77 aa20.62■□□□□ 0.89
AGRN-204ENST00000466223 TSR2Q969E8 191 aaKnown RBP20.62■□□□□ 0.89
AGRN-204ENST00000466223 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
AGRN-204ENST00000466223 SOS1Q07889 1333 aaPredicted RBP20.61■□□□□ 0.89
AGRN-204ENST00000466223 ZPR1O75312 459 aa20.61■□□□□ 0.89
AGRN-204ENST00000466223 AMIGO3Q86WK7 504 aa20.61■□□□□ 0.89
AGRN-204ENST00000466223 ARXQ96QS3 562 aa20.61■□□□□ 0.89
AGRN-204ENST00000466223 ATF5Q9Y2D1 282 aaPredicted RBP20.61■□□□□ 0.89
AGRN-204ENST00000466223 EIF5P55010 431 aaKnown RBP20.6■□□□□ 0.89
AGRN-204ENST00000466223 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
AGRN-204ENST00000466223 DUSP27Q5VZP5 1158 aa20.6■□□□□ 0.89
AGRN-204ENST00000466223 COL15A1P39059 1388 aa20.59■□□□□ 0.89
AGRN-204ENST00000466223 ERBB4Q15303 1308 aa20.59■□□□□ 0.89
AGRN-204ENST00000466223 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
AGRN-204ENST00000466223 KRT24Q2M2I5 525 aa20.59■□□□□ 0.89
AGRN-204ENST00000466223 ZNF521Q96K83 1311 aa20.58■□□□□ 0.89
AGRN-204ENST00000466223 POLD1P28340 1107 aa20.58■□□□□ 0.89
AGRN-204ENST00000466223 HDGFL1Q5TGJ6 251 aa20.58■□□□□ 0.89
AGRN-204ENST00000466223 FANCIQ9NVI1 1328 aa20.57■□□□□ 0.88
AGRN-204ENST00000466223 E9PSI1 815 aa20.57■□□□□ 0.88
AGRN-204ENST00000466223 PIP4K2AP48426 406 aaPredicted RBP20.57■□□□□ 0.88
AGRN-204ENST00000466223 NECTIN2Q92692 538 aa20.57■□□□□ 0.88
AGRN-204ENST00000466223 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
AGRN-204ENST00000466223 MYL6BP14649 208 aa20.56■□□□□ 0.88
AGRN-204ENST00000466223 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
AGRN-204ENST00000466223 NLGN1Q8N2Q7 840 aa20.56■□□□□ 0.88
AGRN-204ENST00000466223 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
AGRN-204ENST00000466223 C8orf58Q8NAV2 365 aa20.56■□□□□ 0.88
AGRN-204ENST00000466223 NARFQ9UHQ1 456 aa20.56■□□□□ 0.88
AGRN-204ENST00000466223 MSL1Q68DK7 614 aa20.55■□□□□ 0.88
AGRN-204ENST00000466223 SPINK5Q9NQ38 1064 aaPredicted RBP20.55■□□□□ 0.88
AGRN-204ENST00000466223 PPP1R1BQ9UD71 204 aaPredicted RBP20.55■□□□□ 0.88
AGRN-204ENST00000466223 USP42Q9H9J4 1324 aaKnown RBP20.54■□□□□ 0.88
AGRN-204ENST00000466223 TWISTNBQ3B726 338 aaPredicted RBP20.54■□□□□ 0.88
AGRN-204ENST00000466223 USPL1Q5W0Q7 1092 aa20.54■□□□□ 0.88
AGRN-204ENST00000466223 DZIP3Q86Y13 1208 aaKnown RBP20.54■□□□□ 0.88
AGRN-204ENST00000466223 SRP68Q9UHB9 627 aaKnown RBP20.54■□□□□ 0.88
AGRN-204ENST00000466223 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
AGRN-204ENST00000466223 C4AP0C0L4 1744 aa20.53■□□□□ 0.88
AGRN-204ENST00000466223 GYS1P13807 737 aa20.53■□□□□ 0.88
AGRN-204ENST00000466223 EXOSC9Q06265 439 aaKnown RBP20.53■□□□□ 0.88
AGRN-204ENST00000466223 CCDC30Q5VVM6 783 aa20.53■□□□□ 0.88
AGRN-204ENST00000466223 DDX21Q9NR30 783 aaKnown RBP eCLIP20.53■□□□□ 0.88
AGRN-204ENST00000466223 DBF4Q9UBU7 674 aaPredicted RBP20.53■□□□□ 0.88
AGRN-204ENST00000466223 SLFN5Q08AF3 891 aa20.52■□□□□ 0.88
AGRN-204ENST00000466223 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
AGRN-204ENST00000466223 TSPYL6Q8N831 410 aa20.52■□□□□ 0.88
AGRN-204ENST00000466223 LRP5O75197 1615 aa20.52■□□□□ 0.88
AGRN-204ENST00000466223 CHPF2Q9P2E5 772 aa20.51■□□□□ 0.87
AGRN-204ENST00000466223 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
AGRN-204ENST00000466223 STK31Q9BXU1 1019 aa20.5■□□□□ 0.87
AGRN-204ENST00000466223 HYPKQ9NX55 129 aa20.5■□□□□ 0.87
AGRN-204ENST00000466223 PTGER2P43116 358 aa20.49■□□□□ 0.87
AGRN-204ENST00000466223 PDIA6Q15084 440 aa20.49■□□□□ 0.87
AGRN-204ENST00000466223 CDCA7LQ96GN5 454 aa20.49■□□□□ 0.87
AGRN-204ENST00000466223 ANXA1P04083 346 aa20.48■□□□□ 0.87
AGRN-204ENST00000466223 FKBP8Q14318 412 aa20.48■□□□□ 0.87
AGRN-204ENST00000466223 PARP3Q9Y6F1 533 aa20.48■□□□□ 0.87
AGRN-204ENST00000466223 VAMP4O75379 141 aa20.47■□□□□ 0.87
AGRN-204ENST00000466223 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
AGRN-204ENST00000466223 MMP10P09238 476 aa20.47■□□□□ 0.87
AGRN-204ENST00000466223 AIMP1Q12904 312 aaKnown RBP20.47■□□□□ 0.87
AGRN-204ENST00000466223 PROSER3Q2NL68 480 aa20.47■□□□□ 0.87
AGRN-204ENST00000466223 CLEC4GQ6UXB4 293 aa20.47■□□□□ 0.87
AGRN-204ENST00000466223 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
AGRN-204ENST00000466223 SGIP1Q9BQI5 828 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms