RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
CTNNB1-211ENST00000465552 N4BP2Q86UW6 1770 aaPredicted RBP13.16□□□□□ -0.3
CTNNB1-211ENST00000465552 CACNA1SQ13698 1873 aa13.16□□□□□ -0.3
CTNNB1-211ENST00000465552 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
CTNNB1-211ENST00000465552 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
CTNNB1-211ENST00000465552 MTFR1LQ9H019 292 aa13.15□□□□□ -0.3
CTNNB1-211ENST00000465552 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
CTNNB1-211ENST00000465552 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
CTNNB1-211ENST00000465552 ANP32CO43423 234 aa13.14□□□□□ -0.31
CTNNB1-211ENST00000465552 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
CTNNB1-211ENST00000465552 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
CTNNB1-211ENST00000465552 THUMPD2Q9BTF0 503 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-211ENST00000465552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
CTNNB1-211ENST00000465552 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
CTNNB1-211ENST00000465552 KCNQ3O43525 872 aa13.13□□□□□ -0.31
CTNNB1-211ENST00000465552 PTGER2P43116 358 aa13.13□□□□□ -0.31
CTNNB1-211ENST00000465552 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
CTNNB1-211ENST00000465552 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
CTNNB1-211ENST00000465552 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
CTNNB1-211ENST00000465552 NUP98P52948 1817 aa13.13□□□□□ -0.31
CTNNB1-211ENST00000465552 CHD4Q14839 1912 aa13.12□□□□□ -0.31
CTNNB1-211ENST00000465552 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
CTNNB1-211ENST00000465552 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
CTNNB1-211ENST00000465552 ADAMTS8Q9UP79 889 aa13.12□□□□□ -0.31
CTNNB1-211ENST00000465552 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
CTNNB1-211ENST00000465552 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
CTNNB1-211ENST00000465552 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
CTNNB1-211ENST00000465552 SSFA2P28290 1259 aa13.11□□□□□ -0.31
CTNNB1-211ENST00000465552 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
CTNNB1-211ENST00000465552 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-211ENST00000465552 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
CTNNB1-211ENST00000465552 BRCA1P38398 1863 aaKnown RBP13.1□□□□□ -0.31
CTNNB1-211ENST00000465552 RIPK4P57078 832 aa13.1□□□□□ -0.31
CTNNB1-211ENST00000465552 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
CTNNB1-211ENST00000465552 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
CTNNB1-211ENST00000465552 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
CTNNB1-211ENST00000465552 ANKRD36CQ5JPF3 1778 aa13.09□□□□□ -0.31
CTNNB1-211ENST00000465552 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
CTNNB1-211ENST00000465552 TMPOP42166 694 aaKnown RBP13.09□□□□□ -0.31
CTNNB1-211ENST00000465552 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
CTNNB1-211ENST00000465552 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
CTNNB1-211ENST00000465552 RUNDC1Q96C34 613 aa13.09□□□□□ -0.31
CTNNB1-211ENST00000465552 ZBTB1Q9Y2K1 713 aa13.09□□□□□ -0.31
CTNNB1-211ENST00000465552 PRAMEF22A3QJZ6 481 aa13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 HAX1O00165 279 aa13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 CYP19A1P11511 503 aaPredicted RBP13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 HMGB2P26583 209 aaKnown RBP13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 POLD1P28340 1107 aa13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 ARXQ96QS3 562 aa13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
CTNNB1-211ENST00000465552 COL15A1P39059 1388 aa13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 FHDC1Q9C0D6 1143 aaPredicted RBP13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 NRXN2Q9P2S2 1712 aa13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
CTNNB1-211ENST00000465552 RFC4P35249 363 aa13.06□□□□□ -0.32
CTNNB1-211ENST00000465552 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
CTNNB1-211ENST00000465552 TAF7Q15545 349 aaPredicted RBP13.06□□□□□ -0.32
CTNNB1-211ENST00000465552 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
CTNNB1-211ENST00000465552 SRP68Q9UHB9 627 aaKnown RBP13.06□□□□□ -0.32
CTNNB1-211ENST00000465552 SOS1Q07889 1333 aaPredicted RBP13.06□□□□□ -0.32
CTNNB1-211ENST00000465552 APAF1O14727 1248 aa13.05□□□□□ -0.32
CTNNB1-211ENST00000465552 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
CTNNB1-211ENST00000465552 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
CTNNB1-211ENST00000465552 TSPYL4Q9UJ04 414 aa13.04□□□□□ -0.32
CTNNB1-211ENST00000465552 TRIM35Q9UPQ4 493 aa13.04□□□□□ -0.32
CTNNB1-211ENST00000465552 LAS1LQ9Y4W2 734 aaKnown RBP13.04□□□□□ -0.32
CTNNB1-211ENST00000465552 COL11A2P13942 1736 aaPredicted RBP13.04□□□□□ -0.32
CTNNB1-211ENST00000465552 ARFGEF2Q9Y6D5 1785 aa13.04□□□□□ -0.32
CTNNB1-211ENST00000465552 STARD3NLO95772 234 aa13.03□□□□□ -0.32
CTNNB1-211ENST00000465552 A1BGP04217 495 aa13.03□□□□□ -0.32
CTNNB1-211ENST00000465552 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
CTNNB1-211ENST00000465552 ARFGEF1Q9Y6D6 1849 aa13.03□□□□□ -0.32
CTNNB1-211ENST00000465552 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
CTNNB1-211ENST00000465552 CCDC88AQ3V6T2 1871 aa13.03□□□□□ -0.32
CTNNB1-211ENST00000465552 GYS1P13807 737 aa13.02□□□□□ -0.33
CTNNB1-211ENST00000465552 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
CTNNB1-211ENST00000465552 NLGN2Q8NFZ4 835 aa13.02□□□□□ -0.33
CTNNB1-211ENST00000465552 SYT17Q9BSW7 474 aa13.02□□□□□ -0.33
CTNNB1-211ENST00000465552 MMP10P09238 476 aa13.01□□□□□ -0.33
CTNNB1-211ENST00000465552 SNRPA1P09661 255 aaKnown RBP13.01□□□□□ -0.33
CTNNB1-211ENST00000465552 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
CTNNB1-211ENST00000465552 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
CTNNB1-211ENST00000465552 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
CTNNB1-211ENST00000465552 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
CTNNB1-211ENST00000465552 LAMB2P55268 1798 aa13□□□□□ -0.33
CTNNB1-211ENST00000465552 ZPR1O75312 459 aa13□□□□□ -0.33
CTNNB1-211ENST00000465552 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
CTNNB1-211ENST00000465552 FKBP8Q14318 412 aa13□□□□□ -0.33
CTNNB1-211ENST00000465552 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
CTNNB1-211ENST00000465552 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
CTNNB1-211ENST00000465552 WWC3Q9ULE0 1092 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms