RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 MBIPQ9NS73 344 aa17.06■□□□□ 0.32
ERGIC3-212ENST00000465298 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
ERGIC3-212ENST00000465298 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
ERGIC3-212ENST00000465298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
ERGIC3-212ENST00000465298 E9PSI1 815 aa17.05■□□□□ 0.32
ERGIC3-212ENST00000465298 KCNQ3O43525 872 aa17.05■□□□□ 0.32
ERGIC3-212ENST00000465298 RFC4P35249 363 aa17.05■□□□□ 0.32
ERGIC3-212ENST00000465298 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
ERGIC3-212ENST00000465298 RGL2O15211 777 aa17.04■□□□□ 0.32
ERGIC3-212ENST00000465298 MSH5O43196 834 aa17.04■□□□□ 0.32
ERGIC3-212ENST00000465298 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
ERGIC3-212ENST00000465298 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
ERGIC3-212ENST00000465298 ZPR1O75312 459 aa17.03■□□□□ 0.32
ERGIC3-212ENST00000465298 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
ERGIC3-212ENST00000465298 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
ERGIC3-212ENST00000465298 PNPLA7Q6ZV29 1317 aa17.02■□□□□ 0.32
ERGIC3-212ENST00000465298 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
ERGIC3-212ENST00000465298 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
ERGIC3-212ENST00000465298 SPON1Q9HCB6 807 aa17.02■□□□□ 0.32
ERGIC3-212ENST00000465298 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.31
ERGIC3-212ENST00000465298 TAF1LQ8IZX4 1826 aa17.01■□□□□ 0.31
ERGIC3-212ENST00000465298 PHF14O94880 888 aa17.01■□□□□ 0.31
ERGIC3-212ENST00000465298 POLD1P28340 1107 aa17.01■□□□□ 0.31
ERGIC3-212ENST00000465298 HNRNPUQ00839 825 aaKnown RBP eCLIP17.01■□□□□ 0.31
ERGIC3-212ENST00000465298 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
ERGIC3-212ENST00000465298 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
ERGIC3-212ENST00000465298 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
ERGIC3-212ENST00000465298 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
ERGIC3-212ENST00000465298 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
ERGIC3-212ENST00000465298 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
ERGIC3-212ENST00000465298 ZNF428Q96B54 188 aa17■□□□□ 0.31
ERGIC3-212ENST00000465298 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
ERGIC3-212ENST00000465298 ZBTB1Q9Y2K1 713 aa17■□□□□ 0.31
ERGIC3-212ENST00000465298 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
ERGIC3-212ENST00000465298 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
ERGIC3-212ENST00000465298 ARHGEF1Q92888 912 aaKnown RBP16.99■□□□□ 0.31
ERGIC3-212ENST00000465298 ZNF652Q9Y2D9 606 aa16.99■□□□□ 0.31
ERGIC3-212ENST00000465298 COL15A1P39059 1388 aa16.99■□□□□ 0.31
ERGIC3-212ENST00000465298 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
ERGIC3-212ENST00000465298 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
ERGIC3-212ENST00000465298 A1BGP04217 495 aa16.98■□□□□ 0.31
ERGIC3-212ENST00000465298 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
ERGIC3-212ENST00000465298 STK31Q9BXU1 1019 aa16.98■□□□□ 0.31
ERGIC3-212ENST00000465298 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
ERGIC3-212ENST00000465298 NARFQ9UHQ1 456 aa16.98■□□□□ 0.31
ERGIC3-212ENST00000465298 TJP1Q07157 1748 aa16.98■□□□□ 0.31
ERGIC3-212ENST00000465298 TWISTNBQ3B726 338 aaPredicted RBP16.97■□□□□ 0.31
ERGIC3-212ENST00000465298 CLEC4GQ6UXB4 293 aa16.97■□□□□ 0.31
ERGIC3-212ENST00000465298 DDX21Q9NR30 783 aaKnown RBP eCLIP16.97■□□□□ 0.31
ERGIC3-212ENST00000465298 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
ERGIC3-212ENST00000465298 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
ERGIC3-212ENST00000465298 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
ERGIC3-212ENST00000465298 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
ERGIC3-212ENST00000465298 KIF6Q6ZMV9 814 aa16.96■□□□□ 0.31
ERGIC3-212ENST00000465298 TSR2Q969E8 191 aaKnown RBP16.96■□□□□ 0.31
ERGIC3-212ENST00000465298 DZIP3Q86Y13 1208 aaKnown RBP16.95■□□□□ 0.3
ERGIC3-212ENST00000465298 ARXQ96QS3 562 aa16.95■□□□□ 0.3
ERGIC3-212ENST00000465298 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
ERGIC3-212ENST00000465298 ERVV-1B6SEH8 477 aa16.94■□□□□ 0.3
ERGIC3-212ENST00000465298 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
ERGIC3-212ENST00000465298 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
ERGIC3-212ENST00000465298 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
ERGIC3-212ENST00000465298 ZBTB7AO95365 584 aa16.93■□□□□ 0.3
ERGIC3-212ENST00000465298 DDX58O95786 925 aaKnown RBP16.93■□□□□ 0.3
ERGIC3-212ENST00000465298 C8orf58Q8NAV2 365 aa16.93■□□□□ 0.3
ERGIC3-212ENST00000465298 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
ERGIC3-212ENST00000465298 LAMB4A4D0S4 1761 aa16.92■□□□□ 0.3
ERGIC3-212ENST00000465298 NBPF26B4DH59 902 aa16.92■□□□□ 0.3
ERGIC3-212ENST00000465298 MYL6BP14649 208 aa16.92■□□□□ 0.3
ERGIC3-212ENST00000465298 EXOSC9Q06265 439 aaKnown RBP16.92■□□□□ 0.3
ERGIC3-212ENST00000465298 HSP90AB3PQ58FF7 597 aa16.92■□□□□ 0.3
ERGIC3-212ENST00000465298 NBPF10Q6P3W6 841 aaKnown RBP16.92■□□□□ 0.3
ERGIC3-212ENST00000465298 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
ERGIC3-212ENST00000465298 GYS1P13807 737 aa16.91■□□□□ 0.3
ERGIC3-212ENST00000465298 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
ERGIC3-212ENST00000465298 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
ERGIC3-212ENST00000465298 VAMP4O75379 141 aa16.9■□□□□ 0.3
ERGIC3-212ENST00000465298 KRT24Q2M2I5 525 aa16.9■□□□□ 0.3
ERGIC3-212ENST00000465298 TRMT2AQ8IZ69 625 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-212ENST00000465298 CHPF2Q9P2E5 772 aa16.9■□□□□ 0.3
ERGIC3-212ENST00000465298 TBC1D2BQ9UPU7 963 aa16.9■□□□□ 0.3
ERGIC3-212ENST00000465298 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
ERGIC3-212ENST00000465298 PARP3Q9Y6F1 533 aa16.9■□□□□ 0.3
ERGIC3-212ENST00000465298 CASZ1Q86V15 1759 aa16.89■□□□□ 0.3
ERGIC3-212ENST00000465298 PDIA6Q15084 440 aa16.89■□□□□ 0.29
ERGIC3-212ENST00000465298 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.29
ERGIC3-212ENST00000465298 MAP3K15Q6ZN16 1313 aa16.89■□□□□ 0.29
ERGIC3-212ENST00000465298 CAMTA2O94983 1202 aa16.88■□□□□ 0.29
ERGIC3-212ENST00000465298 COPS6Q7L5N1 327 aa16.88■□□□□ 0.29
ERGIC3-212ENST00000465298 TSPYL6Q8N831 410 aa16.88■□□□□ 0.29
ERGIC3-212ENST00000465298 NECTIN2Q92692 538 aa16.88■□□□□ 0.29
ERGIC3-212ENST00000465298 SETDB2Q96T68 719 aa16.88■□□□□ 0.29
ERGIC3-212ENST00000465298 PDGFDQ9GZP0 370 aaPredicted RBP16.88■□□□□ 0.29
ERGIC3-212ENST00000465298 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
ERGIC3-212ENST00000465298 MMP10P09238 476 aa16.87■□□□□ 0.29
ERGIC3-212ENST00000465298 ALDH1L2Q3SY69 923 aa16.87■□□□□ 0.29
ERGIC3-212ENST00000465298 ANKRD13DQ6ZTN6 518 aa16.87■□□□□ 0.29
ERGIC3-212ENST00000465298 PLBD2Q8NHP8 589 aa16.87■□□□□ 0.29
ERGIC3-212ENST00000465298 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
ERGIC3-212ENST00000465298 PTGER2P43116 358 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms