RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 IFT57Q9NWB7 429 aa36.07■■■■□ 3.36
CHRD-211ENST00000464833 RPS6KA4O75676 772 aa36.06■■■■□ 3.36
CHRD-211ENST00000464833 STARD3NLO95772 234 aa36.06■■■■□ 3.36
CHRD-211ENST00000464833 SMIM5Q71RC9 77 aa36.06■■■■□ 3.36
CHRD-211ENST00000464833 FLAD1Q8NFF5 587 aa36.06■■■■□ 3.36
CHRD-211ENST00000464833 SALL2Q9Y467 1007 aaPredicted RBP36.06■■■■□ 3.36
CHRD-211ENST00000464833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.04■■■■□ 3.36
CHRD-211ENST00000464833 GIGYF1O75420 1035 aaPredicted RBP36.04■■■■□ 3.36
CHRD-211ENST00000464833 GNAI1P63096 354 aa36.04■■■■□ 3.36
CHRD-211ENST00000464833 RTCBQ9Y3I0 505 aaKnown RBP36.04■■■■□ 3.36
CHRD-211ENST00000464833 USP16Q9Y5T5 823 aa36.04■■■■□ 3.36
CHRD-211ENST00000464833 MBIPQ9NS73 344 aa36.03■■■■□ 3.36
CHRD-211ENST00000464833 PHF14O94880 888 aa36.02■■■■□ 3.36
CHRD-211ENST00000464833 ZBTB1Q9Y2K1 713 aa36.02■■■■□ 3.36
CHRD-211ENST00000464833 IL16Q14005 1332 aa36.01■■■■□ 3.36
CHRD-211ENST00000464833 C4AP0C0L4 1744 aa36■■■■□ 3.35
CHRD-211ENST00000464833 ADRA2BP18089 450 aa35.99■■■■□ 3.35
CHRD-211ENST00000464833 WDR63Q8IWG1 891 aa35.99■■■■□ 3.35
CHRD-211ENST00000464833 SLC16A10Q8TF71 515 aa35.99■■■■□ 3.35
CHRD-211ENST00000464833 SOS1Q07889 1333 aaPredicted RBP35.98■■■■□ 3.35
CHRD-211ENST00000464833 ZBTB7AO95365 584 aa35.97■■■■□ 3.35
CHRD-211ENST00000464833 COL24A1Q17RW2 1714 aa35.97■■■■□ 3.35
CHRD-211ENST00000464833 ZNF521Q96K83 1311 aa35.96■■■■□ 3.35
CHRD-211ENST00000464833 LRP5O75197 1615 aa35.96■■■■□ 3.35
CHRD-211ENST00000464833 A1BGP04217 495 aa35.96■■■■□ 3.35
CHRD-211ENST00000464833 TRAPPC3LQ5T215 181 aa35.96■■■■□ 3.35
CHRD-211ENST00000464833 MTFR1LQ9H019 292 aa35.96■■■■□ 3.35
CHRD-211ENST00000464833 MSH5O43196 834 aa35.95■■■■□ 3.35
CHRD-211ENST00000464833 ARHGEF1Q92888 912 aaKnown RBP35.95■■■■□ 3.35
CHRD-211ENST00000464833 CANXP27824 592 aaKnown RBP35.94■■■■□ 3.34
CHRD-211ENST00000464833 KRT24Q2M2I5 525 aa35.94■■■■□ 3.34
CHRD-211ENST00000464833 COL15A1P39059 1388 aa35.91■■■■□ 3.34
CHRD-211ENST00000464833 EIF5P55010 431 aaKnown RBP35.91■■■■□ 3.34
CHRD-211ENST00000464833 SPON1Q9HCB6 807 aa35.91■■■■□ 3.34
CHRD-211ENST00000464833 SRCAPQ6ZRS2 3230 aa35.91■■■■□ 3.34
CHRD-211ENST00000464833 IL6STP40189 918 aaPredicted RBP35.89■■■■□ 3.34
CHRD-211ENST00000464833 TSR2Q969E8 191 aaKnown RBP35.89■■■■□ 3.34
CHRD-211ENST00000464833 ATF5Q9Y2D1 282 aaPredicted RBP35.89■■■■□ 3.34
CHRD-211ENST00000464833 NBPF26B4DH59 902 aa35.88■■■■□ 3.33
CHRD-211ENST00000464833 NBPF10Q6P3W6 841 aaKnown RBP35.88■■■■□ 3.33
CHRD-211ENST00000464833 NBPF15Q8N660 670 aa35.88■■■■□ 3.33
CHRD-211ENST00000464833 HOXB7P09629 217 aa35.87■■■■□ 3.33
CHRD-211ENST00000464833 RFC4P35249 363 aa35.87■■■■□ 3.33
CHRD-211ENST00000464833 PIP4K2AP48426 406 aaPredicted RBP35.87■■■■□ 3.33
CHRD-211ENST00000464833 SGIP1Q9BQI5 828 aa35.86■■■■□ 3.33
CHRD-211ENST00000464833 SPINK5Q9NQ38 1064 aaPredicted RBP35.86■■■■□ 3.33
CHRD-211ENST00000464833 PTGER2P43116 358 aa35.85■■■■□ 3.33
CHRD-211ENST00000464833 DUSP27Q5VZP5 1158 aa35.85■■■■□ 3.33
CHRD-211ENST00000464833 USP42Q9H9J4 1324 aaKnown RBP35.85■■■■□ 3.33
CHRD-211ENST00000464833 FANCIQ9NVI1 1328 aa35.84■■■■□ 3.33
CHRD-211ENST00000464833 ERBB4Q15303 1308 aa35.83■■■■□ 3.33
CHRD-211ENST00000464833 MSL1Q68DK7 614 aa35.83■■■■□ 3.33
CHRD-211ENST00000464833 C8orf58Q8NAV2 365 aa35.83■■■■□ 3.33
CHRD-211ENST00000464833 SRP68Q9UHB9 627 aaKnown RBP35.83■■■■□ 3.33
CHRD-211ENST00000464833 A0A087WZG4 1122 aa35.82■■■■□ 3.32
CHRD-211ENST00000464833 EIF2S2P20042 333 aaKnown RBP35.82■■■■□ 3.32
CHRD-211ENST00000464833 GYS1P13807 737 aa35.81■■■■□ 3.32
CHRD-211ENST00000464833 NARFQ9UHQ1 456 aa35.81■■■■□ 3.32
CHRD-211ENST00000464833 ZNF330Q9Y3S2 320 aaPredicted RBP35.81■■■■□ 3.32
CHRD-211ENST00000464833 SCN7AQ01118 1682 aa35.79■■■■□ 3.32
CHRD-211ENST00000464833 PDIA6Q15084 440 aa35.79■■■■□ 3.32
CHRD-211ENST00000464833 TSPYL6Q8N831 410 aa35.78■■■■□ 3.32
CHRD-211ENST00000464833 MYH16Q9H6N6 1097 aa35.78■■■■□ 3.32
CHRD-211ENST00000464833 ELL2O00472 640 aaPredicted RBP35.77■■■■□ 3.32
CHRD-211ENST00000464833 ZPR1O75312 459 aa35.77■■■■□ 3.32
CHRD-211ENST00000464833 GOLGA2Q08379 1002 aa35.77■■■■□ 3.32
CHRD-211ENST00000464833 HDGFL1Q5TGJ6 251 aa35.77■■■■□ 3.32
CHRD-211ENST00000464833 NECTIN2Q92692 538 aa35.77■■■■□ 3.32
CHRD-211ENST00000464833 BCORQ6W2J9 1755 aa35.76■■■■□ 3.32
CHRD-211ENST00000464833 USPL1Q5W0Q7 1092 aa35.76■■■■□ 3.31
CHRD-211ENST00000464833 LRP10Q7Z4F1 713 aa35.75■■■■□ 3.31
CHRD-211ENST00000464833 NPM2Q86SE8 214 aaKnown RBP35.75■■■■□ 3.31
CHRD-211ENST00000464833 NLGN1Q8N2Q7 840 aa35.75■■■■□ 3.31
CHRD-211ENST00000464833 TBC1D2BQ9UPU7 963 aa35.75■■■■□ 3.31
CHRD-211ENST00000464833 POLD1P28340 1107 aa35.74■■■■□ 3.31
CHRD-211ENST00000464833 PROSER3Q2NL68 480 aa35.74■■■■□ 3.31
CHRD-211ENST00000464833 BCL2L12Q9HB09 334 aa35.74■■■■□ 3.31
CHRD-211ENST00000464833 MYL6BP14649 208 aa35.73■■■■□ 3.31
CHRD-211ENST00000464833 FKBP8Q14318 412 aa35.73■■■■□ 3.31
CHRD-211ENST00000464833 DZIP3Q86Y13 1208 aaKnown RBP35.73■■■■□ 3.31
CHRD-211ENST00000464833 E9PSI1 815 aa35.71■■■■□ 3.31
CHRD-211ENST00000464833 CAMTA2O94983 1202 aa35.71■■■■□ 3.31
CHRD-211ENST00000464833 HNRNPUQ00839 825 aaKnown RBP eCLIP35.71■■■■□ 3.31
CHRD-211ENST00000464833 DDX21Q9NR30 783 aaKnown RBP eCLIP35.71■■■■□ 3.31
CHRD-211ENST00000464833 CHPF2Q9P2E5 772 aa35.71■■■■□ 3.31
CHRD-211ENST00000464833 ANXA1P04083 346 aa35.7■■■■□ 3.31
CHRD-211ENST00000464833 SLFN5Q08AF3 891 aa35.7■■■■□ 3.31
CHRD-211ENST00000464833 TWISTNBQ3B726 338 aaPredicted RBP35.7■■■■□ 3.31
CHRD-211ENST00000464833 EXOSC9Q06265 439 aaKnown RBP35.69■■■■□ 3.3
CHRD-211ENST00000464833 CDCA7LQ96GN5 454 aa35.68■■■■□ 3.3
CHRD-211ENST00000464833 ARXQ96QS3 562 aa35.68■■■■□ 3.3
CHRD-211ENST00000464833 DBF4Q9UBU7 674 aaPredicted RBP35.68■■■■□ 3.3
CHRD-211ENST00000464833 MMP10P09238 476 aa35.67■■■■□ 3.3
CHRD-211ENST00000464833 TTLL7Q6ZT98 887 aa35.65■■■■□ 3.3
CHRD-211ENST00000464833 CHMP4AQ9BY43 222 aa35.65■■■■□ 3.3
CHRD-211ENST00000464833 PPP1R1BQ9UD71 204 aaPredicted RBP35.65■■■■□ 3.3
CHRD-211ENST00000464833 RGL2O15211 777 aa35.64■■■■□ 3.3
CHRD-211ENST00000464833 TM4SF1P30408 202 aa35.64■■■■□ 3.3
CHRD-211ENST00000464833 TRMT2AQ8IZ69 625 aaKnown RBP35.64■■■■□ 3.3
CHRD-211ENST00000464833 VAMP4O75379 141 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms