RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 C4BP0C0L5 1744 aa17.43■□□□□ 0.38
TSPAN1-202ENST00000464786 NPM2Q86SE8 214 aaKnown RBP17.42■□□□□ 0.38
TSPAN1-202ENST00000464786 CHMP4AQ9BY43 222 aa17.42■□□□□ 0.38
TSPAN1-202ENST00000464786 MTFR1LQ9H019 292 aa17.42■□□□□ 0.38
TSPAN1-202ENST00000464786 SPON1Q9HCB6 807 aa17.42■□□□□ 0.38
TSPAN1-202ENST00000464786 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
TSPAN1-202ENST00000464786 A0A087WZG4 1122 aa17.41■□□□□ 0.38
TSPAN1-202ENST00000464786 RFC4P35249 363 aa17.41■□□□□ 0.38
TSPAN1-202ENST00000464786 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
TSPAN1-202ENST00000464786 SENP3-EIF4A1A0A087X0R7 540 aa17.4■□□□□ 0.38
TSPAN1-202ENST00000464786 PHF14O94880 888 aa17.4■□□□□ 0.38
TSPAN1-202ENST00000464786 A1BGP04217 495 aa17.4■□□□□ 0.38
TSPAN1-202ENST00000464786 HOXB7P09629 217 aa17.4■□□□□ 0.38
TSPAN1-202ENST00000464786 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
TSPAN1-202ENST00000464786 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
TSPAN1-202ENST00000464786 ARHGEF1Q92888 912 aaKnown RBP17.4■□□□□ 0.38
TSPAN1-202ENST00000464786 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.38
TSPAN1-202ENST00000464786 PDGFDQ9GZP0 370 aaPredicted RBP17.39■□□□□ 0.37
TSPAN1-202ENST00000464786 ZBTB1Q9Y2K1 713 aa17.39■□□□□ 0.37
TSPAN1-202ENST00000464786 SRCAPQ6ZRS2 3230 aa17.38■□□□□ 0.37
TSPAN1-202ENST00000464786 PRAMEF22A3QJZ6 481 aa17.38■□□□□ 0.37
TSPAN1-202ENST00000464786 ZBTB7AO95365 584 aa17.38■□□□□ 0.37
TSPAN1-202ENST00000464786 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
TSPAN1-202ENST00000464786 SOS1Q07889 1333 aaPredicted RBP17.38■□□□□ 0.37
TSPAN1-202ENST00000464786 MYH14Q7Z406 1995 aaKnown RBP17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 ZPR1O75312 459 aa17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 NLGN1Q8N2Q7 840 aa17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 TJP1Q07157 1748 aa17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 QSER1Q2KHR3 1735 aa17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 ERBB4Q15303 1308 aa17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
TSPAN1-202ENST00000464786 COL5A3P25940 1745 aaPredicted RBP17.36■□□□□ 0.37
TSPAN1-202ENST00000464786 POLD1P28340 1107 aa17.36■□□□□ 0.37
TSPAN1-202ENST00000464786 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
TSPAN1-202ENST00000464786 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
TSPAN1-202ENST00000464786 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
TSPAN1-202ENST00000464786 SMIM5Q71RC9 77 aa17.35■□□□□ 0.37
TSPAN1-202ENST00000464786 UBR3Q6ZT12 1888 aa17.35■□□□□ 0.37
TSPAN1-202ENST00000464786 ZNF521Q96K83 1311 aa17.34■□□□□ 0.37
TSPAN1-202ENST00000464786 NARFQ9UHQ1 456 aa17.34■□□□□ 0.37
TSPAN1-202ENST00000464786 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
TSPAN1-202ENST00000464786 COL15A1P39059 1388 aa17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 NBPF26B4DH59 902 aa17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 E9PSI1 815 aa17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 HDGFL1Q5TGJ6 251 aa17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 NBPF10Q6P3W6 841 aaKnown RBP17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 TSR2Q969E8 191 aaKnown RBP17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 ARXQ96QS3 562 aa17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 CASZ1Q86V15 1759 aa17.32■□□□□ 0.36
TSPAN1-202ENST00000464786 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
TSPAN1-202ENST00000464786 RGL2O15211 777 aa17.31■□□□□ 0.36
TSPAN1-202ENST00000464786 GYS1P13807 737 aa17.31■□□□□ 0.36
TSPAN1-202ENST00000464786 PTGER2P43116 358 aa17.31■□□□□ 0.36
TSPAN1-202ENST00000464786 C8orf58Q8NAV2 365 aa17.31■□□□□ 0.36
TSPAN1-202ENST00000464786 DDX21Q9NR30 783 aaKnown RBP eCLIP17.31■□□□□ 0.36
TSPAN1-202ENST00000464786 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
TSPAN1-202ENST00000464786 CCDC30Q5VVM6 783 aa17.3■□□□□ 0.36
TSPAN1-202ENST00000464786 DZIP3Q86Y13 1208 aaKnown RBP17.3■□□□□ 0.36
TSPAN1-202ENST00000464786 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
TSPAN1-202ENST00000464786 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
TSPAN1-202ENST00000464786 PPP1R1BQ9UD71 204 aaPredicted RBP17.3■□□□□ 0.36
TSPAN1-202ENST00000464786 SRP68Q9UHB9 627 aaKnown RBP17.3■□□□□ 0.36
TSPAN1-202ENST00000464786 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
TSPAN1-202ENST00000464786 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
TSPAN1-202ENST00000464786 MYL6BP14649 208 aa17.29■□□□□ 0.36
TSPAN1-202ENST00000464786 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
TSPAN1-202ENST00000464786 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
TSPAN1-202ENST00000464786 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
TSPAN1-202ENST00000464786 CLEC4GQ6UXB4 293 aa17.29■□□□□ 0.36
TSPAN1-202ENST00000464786 TBC1D2BQ9UPU7 963 aa17.29■□□□□ 0.36
TSPAN1-202ENST00000464786 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
TSPAN1-202ENST00000464786 SLFN5Q08AF3 891 aa17.28■□□□□ 0.36
TSPAN1-202ENST00000464786 PDIA6Q15084 440 aa17.28■□□□□ 0.36
TSPAN1-202ENST00000464786 TWISTNBQ3B726 338 aaPredicted RBP17.28■□□□□ 0.36
TSPAN1-202ENST00000464786 NECTIN2Q92692 538 aa17.28■□□□□ 0.36
TSPAN1-202ENST00000464786 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
TSPAN1-202ENST00000464786 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
TSPAN1-202ENST00000464786 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
TSPAN1-202ENST00000464786 ERVV-1B6SEH8 477 aa17.27■□□□□ 0.36
TSPAN1-202ENST00000464786 FKBP8Q14318 412 aa17.27■□□□□ 0.36
TSPAN1-202ENST00000464786 KIF6Q6ZMV9 814 aa17.27■□□□□ 0.36
TSPAN1-202ENST00000464786 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
TSPAN1-202ENST00000464786 LRP5O75197 1615 aa17.26■□□□□ 0.35
TSPAN1-202ENST00000464786 CAMTA2O94983 1202 aa17.26■□□□□ 0.35
TSPAN1-202ENST00000464786 MMP10P09238 476 aa17.26■□□□□ 0.35
TSPAN1-202ENST00000464786 TM4SF1P30408 202 aa17.26■□□□□ 0.35
TSPAN1-202ENST00000464786 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
TSPAN1-202ENST00000464786 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
TSPAN1-202ENST00000464786 CHPF2Q9P2E5 772 aa17.26■□□□□ 0.35
TSPAN1-202ENST00000464786 PARP3Q9Y6F1 533 aa17.26■□□□□ 0.35
TSPAN1-202ENST00000464786 VAMP4O75379 141 aa17.25■□□□□ 0.35
TSPAN1-202ENST00000464786 BCL2L12Q9HB09 334 aa17.25■□□□□ 0.35
TSPAN1-202ENST00000464786 LRP10Q7Z4F1 713 aa17.24■□□□□ 0.35
TSPAN1-202ENST00000464786 TRMT2AQ8IZ69 625 aaKnown RBP17.24■□□□□ 0.35
TSPAN1-202ENST00000464786 LAMB4A4D0S4 1761 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms