RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
CD46-211ENST00000464082 RUBCNLQ9H714 662 aa9.36□□□□□ -0.91
CD46-211ENST00000464082 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
CD46-211ENST00000464082 PCDHB11Q9Y5F2 797 aa9.36□□□□□ -0.91
CD46-211ENST00000464082 ERCC6L2Q5T890 1561 aa9.36□□□□□ -0.91
CD46-211ENST00000464082 FHAD1B1AJZ9 1412 aa9.35□□□□□ -0.91
CD46-211ENST00000464082 GNB5O14775 395 aa9.35□□□□□ -0.91
CD46-211ENST00000464082 BMP4P12644 408 aa9.35□□□□□ -0.91
CD46-211ENST00000464082 CTBSQ01459 385 aa9.35□□□□□ -0.91
CD46-211ENST00000464082 CHMP7Q8WUX9 453 aaPredicted RBP9.35□□□□□ -0.91
CD46-211ENST00000464082 BTBD6Q96KE9 485 aa9.35□□□□□ -0.91
CD46-211ENST00000464082 SEMA6BQ9H3T3 888 aa9.35□□□□□ -0.91
CD46-211ENST00000464082 A0A1B0GTH6 734 aa9.34□□□□□ -0.91
CD46-211ENST00000464082 RNF20Q5VTR2 975 aa9.34□□□□□ -0.91
CD46-211ENST00000464082 SLCO4C1Q6ZQN7 724 aa9.34□□□□□ -0.91
CD46-211ENST00000464082 CCDC125Q86Z20 511 aa9.34□□□□□ -0.91
CD46-211ENST00000464082 ESYT1Q9BSJ8 1104 aa9.34□□□□□ -0.91
CD46-211ENST00000464082 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
CD46-211ENST00000464082 DOC2BQ14184 412 aa9.33□□□□□ -0.92
CD46-211ENST00000464082 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
CD46-211ENST00000464082 HRH3Q9Y5N1 445 aa9.33□□□□□ -0.92
CD46-211ENST00000464082 RUSC2Q8N2Y8 1516 aa9.32□□□□□ -0.92
CD46-211ENST00000464082 BNIP3LO60238 219 aa9.32□□□□□ -0.92
CD46-211ENST00000464082 EPXP11678 715 aa9.32□□□□□ -0.92
CD46-211ENST00000464082 MSX1P28360 303 aa9.32□□□□□ -0.92
CD46-211ENST00000464082 DGKGP49619 791 aa9.32□□□□□ -0.92
CD46-211ENST00000464082 NDFIP2Q9NV92 336 aa9.32□□□□□ -0.92
CD46-211ENST00000464082 ATXN7L1Q9ULK2 861 aaPredicted RBP9.32□□□□□ -0.92
CD46-211ENST00000464082 CUL7Q14999 1698 aa9.32□□□□□ -0.92
CD46-211ENST00000464082 GNRH1P01148 92 aa9.31□□□□□ -0.92
CD46-211ENST00000464082 FGFR3P22607 806 aa9.31□□□□□ -0.92
CD46-211ENST00000464082 C4orf17Q53FE4 359 aa9.31□□□□□ -0.92
CD46-211ENST00000464082 DDRGK1Q96HY6 314 aa9.31□□□□□ -0.92
CD46-211ENST00000464082 GJD4Q96KN9 370 aaPredicted RBP9.31□□□□□ -0.92
CD46-211ENST00000464082 ZSCAN10Q96SZ4 725 aaPredicted RBP9.31□□□□□ -0.92
CD46-211ENST00000464082 CSB-PGBD3P0DP91 1061 aa9.3□□□□□ -0.92
CD46-211ENST00000464082 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
CD46-211ENST00000464082 ZMYM1Q5SVZ6 1142 aa9.3□□□□□ -0.92
CD46-211ENST00000464082 PGBD3Q8N328 593 aa9.3□□□□□ -0.92
CD46-211ENST00000464082 FHDC1Q9C0D6 1143 aaPredicted RBP9.3□□□□□ -0.92
CD46-211ENST00000464082 ESF1Q9H501 851 aaKnown RBP9.3□□□□□ -0.92
CD46-211ENST00000464082 CYB5RLQ6IPT4 315 aa9.29□□□□□ -0.92
CD46-211ENST00000464082 RNF135Q8IUD6 432 aa9.29□□□□□ -0.92
CD46-211ENST00000464082 NEURL1BA8MQ27 555 aa9.28□□□□□ -0.92
CD46-211ENST00000464082 KIF27Q86VH2 1401 aa9.28□□□□□ -0.92
CD46-211ENST00000464082 PIK3R2O00459 728 aa9.27□□□□□ -0.93
CD46-211ENST00000464082 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
CD46-211ENST00000464082 GNASQ5JWF2 1037 aa9.27□□□□□ -0.93
CD46-211ENST00000464082 TMEM214Q6NUQ4 689 aaKnown RBP9.27□□□□□ -0.93
CD46-211ENST00000464082 XAGE2Q96GT9 111 aa9.27□□□□□ -0.93
CD46-211ENST00000464082 CDCA7Q9BWT1 371 aaPredicted RBP9.27□□□□□ -0.93
CD46-211ENST00000464082 ARAFP10398 606 aa9.26□□□□□ -0.93
CD46-211ENST00000464082 FOXD4L6Q3SYB3 417 aaPredicted RBP9.26□□□□□ -0.93
CD46-211ENST00000464082 FOXD4L3Q6VB84 417 aaPredicted RBP9.26□□□□□ -0.93
CD46-211ENST00000464082 NOP53Q9NZM5 478 aaKnown RBP9.26□□□□□ -0.93
CD46-211ENST00000464082 HCN2Q9UL51 889 aa9.26□□□□□ -0.93
CD46-211ENST00000464082 STAU1O95793 577 aaKnown RBP9.25□□□□□ -0.93
CD46-211ENST00000464082 NR1H3Q13133 447 aa9.25□□□□□ -0.93
CD46-211ENST00000464082 CHSY3Q70JA7 882 aa9.25□□□□□ -0.93
CD46-211ENST00000464082 KLF15Q9UIH9 416 aa9.25□□□□□ -0.93
CD46-211ENST00000464082 DNAAF2Q9NVR5 837 aaKnown RBP9.24□□□□□ -0.93
CD46-211ENST00000464082 MCCD1P59942 119 aaPredicted RBP9.23□□□□□ -0.93
CD46-211ENST00000464082 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
CD46-211ENST00000464082 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
CD46-211ENST00000464082 GTF2E1P29083 439 aaPredicted RBP9.22□□□□□ -0.93
CD46-211ENST00000464082 TMEM259Q4ZIN3 620 aa9.22□□□□□ -0.93
CD46-211ENST00000464082 TRIM11Q96F44 468 aa9.22□□□□□ -0.93
CD46-211ENST00000464082 ZCCHC2Q9C0B9 1178 aaKnown RBP9.22□□□□□ -0.93
CD46-211ENST00000464082 KIF13AQ9H1H9 1805 aa9.21□□□□□ -0.93
CD46-211ENST00000464082 GATA4P43694 442 aa9.21□□□□□ -0.94
CD46-211ENST00000464082 RSPO4Q2I0M5 234 aaPredicted RBP9.21□□□□□ -0.94
CD46-211ENST00000464082 FCHSD1Q86WN1 690 aa9.21□□□□□ -0.94
CD46-211ENST00000464082 KRTAP4-12Q9BQ66 201 aa9.21□□□□□ -0.94
CD46-211ENST00000464082 KIAA0586Q9BVV6 1533 aa9.21□□□□□ -0.94
CD46-211ENST00000464082 GPR37L1O60883 481 aa9.2□□□□□ -0.94
CD46-211ENST00000464082 PLVAPQ9BX97 442 aa9.2□□□□□ -0.94
CD46-211ENST00000464082 CARMIL1Q5VZK9 1371 aa9.2□□□□□ -0.94
CD46-211ENST00000464082 PRG4Q92954 1404 aaPredicted RBP9.2□□□□□ -0.94
CD46-211ENST00000464082 CTTNBP2Q8WZ74 1663 aa9.2□□□□□ -0.94
CD46-211ENST00000464082 MYCP01106 439 aaPredicted RBP9.19□□□□□ -0.94
CD46-211ENST00000464082 LCE3BQ5TA77 95 aa9.19□□□□□ -0.94
CD46-211ENST00000464082 PPARGC1BQ86YN6 1023 aaKnown RBP9.19□□□□□ -0.94
CD46-211ENST00000464082 RHBDD1Q8TEB9 315 aa9.19□□□□□ -0.94
CD46-211ENST00000464082 PCDHGC4Q9Y5F7 938 aa9.19□□□□□ -0.94
CD46-211ENST00000464082 SCO2A0A1W2PP80 73 aa9.18□□□□□ -0.94
CD46-211ENST00000464082 CD33P20138 364 aa9.18□□□□□ -0.94
CD46-211ENST00000464082 IQGAP2Q13576 1575 aa9.18□□□□□ -0.94
CD46-211ENST00000464082 TSGA10IPQ3SY00 556 aa9.18□□□□□ -0.94
CD46-211ENST00000464082 NKAPLQ5M9Q1 402 aa9.18□□□□□ -0.94
CD46-211ENST00000464082 ADCY10Q96PN6 1610 aa9.18□□□□□ -0.94
CD46-211ENST00000464082 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
CD46-211ENST00000464082 DCDC2BA2VCK2 349 aa9.17□□□□□ -0.94
CD46-211ENST00000464082 ATP4AP20648 1035 aa9.17□□□□□ -0.94
CD46-211ENST00000464082 ADH6P28332 368 aa9.17□□□□□ -0.94
CD46-211ENST00000464082 PLA2G4AP47712 749 aa9.17□□□□□ -0.94
CD46-211ENST00000464082 ESCO1Q5FWF5 840 aa9.17□□□□□ -0.94
CD46-211ENST00000464082 FIGNL1Q6PIW4 674 aa9.17□□□□□ -0.94
CD46-211ENST00000464082 CEP126Q9P2H0 1117 aa9.17□□□□□ -0.94
CD46-211ENST00000464082 MAPTP10636 758 aaKnown RBP9.16□□□□□ -0.94
CD46-211ENST00000464082 TBC1D9Q6ZT07 1266 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms