RNA–Protein interactions for RNA: ENST00000463817.5

HMGN2-203, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-203ENST00000463817 RAPGEF4Q8WZA2 1011 aa11.35□□□□□ -0.59
HMGN2-203ENST00000463817 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
HMGN2-203ENST00000463817 ZNF853P0CG23 659 aa11.34□□□□□ -0.59
HMGN2-203ENST00000463817 TATP17735 454 aaPredicted RBP11.34□□□□□ -0.59
HMGN2-203ENST00000463817 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
HMGN2-203ENST00000463817 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
HMGN2-203ENST00000463817 THRAP3Q9Y2W1 955 aaKnown RBP11.34□□□□□ -0.59
HMGN2-203ENST00000463817 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
HMGN2-203ENST00000463817 MRC1P22897 1456 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 SHANK3Q9BYB0 1731 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 IL2RBP14784 551 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 EVA1CP58658 441 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 NEUROD2Q15784 382 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 AKAP4Q5JQC9 854 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
HMGN2-203ENST00000463817 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
HMGN2-203ENST00000463817 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
HMGN2-203ENST00000463817 NBPF14Q5TI25 921 aa11.32□□□□□ -0.6
HMGN2-203ENST00000463817 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
HMGN2-203ENST00000463817 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
HMGN2-203ENST00000463817 BARGINQ6ZT62 677 aa11.32□□□□□ -0.6
HMGN2-203ENST00000463817 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
HMGN2-203ENST00000463817 MYH16Q9H6N6 1097 aa11.32□□□□□ -0.6
HMGN2-203ENST00000463817 PPP1R1BQ9UD71 204 aaPredicted RBP11.32□□□□□ -0.6
HMGN2-203ENST00000463817 SPG7Q9UQ90 795 aa11.32□□□□□ -0.6
HMGN2-203ENST00000463817 CHD4Q14839 1912 aa11.31□□□□□ -0.6
HMGN2-203ENST00000463817 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
HMGN2-203ENST00000463817 BABAM1Q9NWV8 329 aa11.31□□□□□ -0.6
HMGN2-203ENST00000463817 TNS2Q63HR2 1409 aa11.31□□□□□ -0.6
HMGN2-203ENST00000463817 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
HMGN2-203ENST00000463817 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
HMGN2-203ENST00000463817 KDM6AO15550 1401 aaPredicted RBP11.3□□□□□ -0.6
HMGN2-203ENST00000463817 CT47B1P0C2W7 299 aaPredicted RBP11.3□□□□□ -0.6
HMGN2-203ENST00000463817 GNAI1P63096 354 aa11.3□□□□□ -0.6
HMGN2-203ENST00000463817 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
HMGN2-203ENST00000463817 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
HMGN2-203ENST00000463817 FANCIQ9NVI1 1328 aa11.3□□□□□ -0.6
HMGN2-203ENST00000463817 SIPA1L3O60292 1781 aaPredicted RBP11.29□□□□□ -0.6
HMGN2-203ENST00000463817 CHL1O00533 1208 aa11.29□□□□□ -0.6
HMGN2-203ENST00000463817 CYP27B1O15528 508 aa11.29□□□□□ -0.6
HMGN2-203ENST00000463817 HSP90AB1P08238 724 aaKnown RBP11.29□□□□□ -0.6
HMGN2-203ENST00000463817 PHKG2P15735 406 aa11.29□□□□□ -0.6
HMGN2-203ENST00000463817 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
HMGN2-203ENST00000463817 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
HMGN2-203ENST00000463817 IFNL2Q8IZJ0 200 aa11.29□□□□□ -0.6
HMGN2-203ENST00000463817 IL17REQ8NFR9 667 aa11.29□□□□□ -0.6
HMGN2-203ENST00000463817 SPON1Q9HCB6 807 aa11.29□□□□□ -0.6
HMGN2-203ENST00000463817 VIRMAQ69YN4 1812 aaKnown RBP11.29□□□□□ -0.6
HMGN2-203ENST00000463817 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
HMGN2-203ENST00000463817 KCNQ2O43526 872 aa11.28□□□□□ -0.6
HMGN2-203ENST00000463817 FKBP8Q14318 412 aa11.28□□□□□ -0.6
HMGN2-203ENST00000463817 MCM10Q7L590 875 aa11.28□□□□□ -0.6
HMGN2-203ENST00000463817 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
HMGN2-203ENST00000463817 THUMPD2Q9BTF0 503 aaKnown RBP11.28□□□□□ -0.6
HMGN2-203ENST00000463817 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.61
HMGN2-203ENST00000463817 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.61
HMGN2-203ENST00000463817 DCTN1Q14203 1278 aa11.27□□□□□ -0.61
HMGN2-203ENST00000463817 GSE1Q14687 1217 aa11.27□□□□□ -0.61
HMGN2-203ENST00000463817 DCAF5Q96JK2 942 aa11.27□□□□□ -0.61
HMGN2-203ENST00000463817 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
HMGN2-203ENST00000463817 MBIPQ9NS73 344 aa11.26□□□□□ -0.61
HMGN2-203ENST00000463817 SOS1Q07889 1333 aaPredicted RBP11.26□□□□□ -0.61
HMGN2-203ENST00000463817 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
HMGN2-203ENST00000463817 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
HMGN2-203ENST00000463817 MPRIPQ6WCQ1 1025 aa11.24□□□□□ -0.61
HMGN2-203ENST00000463817 TSR2Q969E8 191 aaKnown RBP11.24□□□□□ -0.61
HMGN2-203ENST00000463817 LGR6Q9HBX8 967 aa11.24□□□□□ -0.61
HMGN2-203ENST00000463817 ANO8Q9HCE9 1232 aaPredicted RBP11.24□□□□□ -0.61
HMGN2-203ENST00000463817 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
HMGN2-203ENST00000463817 BCL9O00512 1426 aa11.24□□□□□ -0.61
HMGN2-203ENST00000463817 TOGARAM1Q9Y4F4 1720 aa11.23□□□□□ -0.61
HMGN2-203ENST00000463817 ERVV-2B6SEH9 535 aa11.23□□□□□ -0.61
HMGN2-203ENST00000463817 PSEN1P49768 467 aa11.23□□□□□ -0.61
HMGN2-203ENST00000463817 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
HMGN2-203ENST00000463817 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
HMGN2-203ENST00000463817 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
HMGN2-203ENST00000463817 HEG1Q9ULI3 1381 aa11.23□□□□□ -0.61
HMGN2-203ENST00000463817 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
HMGN2-203ENST00000463817 G3V3G9 751 aa11.22□□□□□ -0.61
HMGN2-203ENST00000463817 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
HMGN2-203ENST00000463817 EXOSC9Q06265 439 aaKnown RBP11.22□□□□□ -0.61
HMGN2-203ENST00000463817 TEFQ10587 303 aa11.22□□□□□ -0.61
HMGN2-203ENST00000463817 BTAF1O14981 1849 aa11.21□□□□□ -0.61
HMGN2-203ENST00000463817 EXOC5O00471 708 aa11.21□□□□□ -0.61
HMGN2-203ENST00000463817 HOXB7P09629 217 aa11.21□□□□□ -0.61
HMGN2-203ENST00000463817 DDB1Q16531 1140 aa11.21□□□□□ -0.61
HMGN2-203ENST00000463817 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
HMGN2-203ENST00000463817 UBR2Q8IWV8 1755 aa11.21□□□□□ -0.62
HMGN2-203ENST00000463817 PLSCR1O15162 318 aa11.2□□□□□ -0.62
HMGN2-203ENST00000463817 ZBTB7AO95365 584 aa11.2□□□□□ -0.62
HMGN2-203ENST00000463817 RARSP54136 660 aaKnown RBP11.2□□□□□ -0.62
HMGN2-203ENST00000463817 ALDH1L2Q3SY69 923 aa11.2□□□□□ -0.62
HMGN2-203ENST00000463817 PTF1AQ7RTS3 328 aa11.2□□□□□ -0.62
HMGN2-203ENST00000463817 BCL11BQ9C0K0 894 aaPredicted RBP11.2□□□□□ -0.62
HMGN2-203ENST00000463817 PDGFDQ9GZP0 370 aaPredicted RBP11.2□□□□□ -0.62
HMGN2-203ENST00000463817 KAT6BQ8WYB5 2073 aa11.2□□□□□ -0.62
HMGN2-203ENST00000463817 CACNA1FO60840 1977 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms