RNA–Protein interactions for RNA: ENST00000463784.5

IRF1-207, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-207ENST00000463784 TJP1Q07157 1748 aa26.71■■□□□ 1.87
IRF1-207ENST00000463784 MSL1Q68DK7 614 aa26.71■■□□□ 1.87
IRF1-207ENST00000463784 TSPYL4Q9UJ04 414 aa26.71■■□□□ 1.87
IRF1-207ENST00000463784 TRIM35Q9UPQ4 493 aa26.71■■□□□ 1.87
IRF1-207ENST00000463784 UBR3Q6ZT12 1888 aa26.7■■□□□ 1.87
IRF1-207ENST00000463784 NPM2Q86SE8 214 aaKnown RBP26.69■■□□□ 1.86
IRF1-207ENST00000463784 ZBTB1Q9Y2K1 713 aa26.69■■□□□ 1.86
IRF1-207ENST00000463784 CANXP27824 592 aaKnown RBP26.68■■□□□ 1.86
IRF1-207ENST00000463784 CALD1Q05682 793 aaKnown RBP26.68■■□□□ 1.86
IRF1-207ENST00000463784 NLGN1Q8N2Q7 840 aa26.68■■□□□ 1.86
IRF1-207ENST00000463784 SOS1Q07889 1333 aaPredicted RBP26.67■■□□□ 1.86
IRF1-207ENST00000463784 EIF4A1P60842 406 aaKnown RBP26.66■■□□□ 1.86
IRF1-207ENST00000463784 USP16Q9Y5T5 823 aa26.66■■□□□ 1.86
IRF1-207ENST00000463784 A0A087WZG4 1122 aa26.65■■□□□ 1.86
IRF1-207ENST00000463784 ZPR1O75312 459 aa26.65■■□□□ 1.86
IRF1-207ENST00000463784 LAS1LQ9Y4W2 734 aaKnown RBP26.65■■□□□ 1.86
IRF1-207ENST00000463784 IL6STP40189 918 aaPredicted RBP26.64■■□□□ 1.86
IRF1-207ENST00000463784 FAM9BQ8IZU0 186 aa26.64■■□□□ 1.86
IRF1-207ENST00000463784 GIGYF1O75420 1035 aaPredicted RBP26.63■■□□□ 1.85
IRF1-207ENST00000463784 A1BGP04217 495 aa26.63■■□□□ 1.85
IRF1-207ENST00000463784 MYH14Q7Z406 1995 aaKnown RBP26.62■■□□□ 1.85
IRF1-207ENST00000463784 COL15A1P39059 1388 aa26.62■■□□□ 1.85
IRF1-207ENST00000463784 PRAMEF22A3QJZ6 481 aa26.62■■□□□ 1.85
IRF1-207ENST00000463784 CHL1O00533 1208 aa26.62■■□□□ 1.85
IRF1-207ENST00000463784 GYS1P13807 737 aa26.62■■□□□ 1.85
IRF1-207ENST00000463784 EIF5P55010 431 aaKnown RBP26.62■■□□□ 1.85
IRF1-207ENST00000463784 FHDC1Q9C0D6 1143 aaPredicted RBP26.62■■□□□ 1.85
IRF1-207ENST00000463784 USP42Q9H9J4 1324 aaKnown RBP26.62■■□□□ 1.85
IRF1-207ENST00000463784 NCBP3Q53F19 620 aaKnown RBP26.61■■□□□ 1.85
IRF1-207ENST00000463784 CFAP44Q96MT7 982 aa26.61■■□□□ 1.85
IRF1-207ENST00000463784 NARFQ9UHQ1 456 aa26.61■■□□□ 1.85
IRF1-207ENST00000463784 ZNF330Q9Y3S2 320 aaPredicted RBP26.61■■□□□ 1.85
IRF1-207ENST00000463784 KLHL34Q8N239 644 aa26.6■■□□□ 1.85
IRF1-207ENST00000463784 SYT17Q9BSW7 474 aa26.6■■□□□ 1.85
IRF1-207ENST00000463784 CCDC27Q2M243 656 aa26.59■■□□□ 1.85
IRF1-207ENST00000463784 SRP68Q9UHB9 627 aaKnown RBP26.59■■□□□ 1.85
IRF1-207ENST00000463784 MMP10P09238 476 aa26.58■■□□□ 1.85
IRF1-207ENST00000463784 GNAI1P63096 354 aa26.58■■□□□ 1.85
IRF1-207ENST00000463784 USPL1Q5W0Q7 1092 aa26.58■■□□□ 1.85
IRF1-207ENST00000463784 DIEXFQ68CQ4 756 aaKnown RBP26.58■■□□□ 1.85
IRF1-207ENST00000463784 COL24A1Q17RW2 1714 aa26.58■■□□□ 1.85
IRF1-207ENST00000463784 KDM3BQ7LBC6 1761 aa26.58■■□□□ 1.85
IRF1-207ENST00000463784 DCAF8L1A6NGE4 600 aa26.57■■□□□ 1.84
IRF1-207ENST00000463784 CCER2I3L3R5 266 aa26.57■■□□□ 1.84
IRF1-207ENST00000463784 IFT57Q9NWB7 429 aa26.57■■□□□ 1.84
IRF1-207ENST00000463784 SRCAPQ6ZRS2 3230 aa26.57■■□□□ 1.84
IRF1-207ENST00000463784 PARP3Q9Y6F1 533 aa26.55■■□□□ 1.84
IRF1-207ENST00000463784 FKBP8Q14318 412 aa26.54■■□□□ 1.84
IRF1-207ENST00000463784 NGEFQ8N5V2 710 aa26.54■■□□□ 1.84
IRF1-207ENST00000463784 WWC1Q8IX03 1113 aa26.53■■□□□ 1.84
IRF1-207ENST00000463784 TBC1D2BQ9UPU7 963 aa26.53■■□□□ 1.84
IRF1-207ENST00000463784 CD2APQ9Y5K6 639 aa26.53■■□□□ 1.84
IRF1-207ENST00000463784 ZNF853P0CG23 659 aa26.52■■□□□ 1.84
IRF1-207ENST00000463784 PIP4K2AP48426 406 aaPredicted RBP26.52■■□□□ 1.84
IRF1-207ENST00000463784 DZIP3Q86Y13 1208 aaKnown RBP26.52■■□□□ 1.84
IRF1-207ENST00000463784 ERBB4Q15303 1308 aa26.51■■□□□ 1.83
IRF1-207ENST00000463784 NBPF26B4DH59 902 aa26.51■■□□□ 1.83
IRF1-207ENST00000463784 NBPF10Q6P3W6 841 aaKnown RBP26.51■■□□□ 1.83
IRF1-207ENST00000463784 NBPF15Q8N660 670 aa26.51■■□□□ 1.83
IRF1-207ENST00000463784 MBIPQ9NS73 344 aa26.51■■□□□ 1.83
IRF1-207ENST00000463784 SENP3-EIF4A1A0A087X0R7 540 aa26.5■■□□□ 1.83
IRF1-207ENST00000463784 EIF2S2P20042 333 aaKnown RBP26.5■■□□□ 1.83
IRF1-207ENST00000463784 C4AP0C0L4 1744 aa26.5■■□□□ 1.83
IRF1-207ENST00000463784 TM4SF1P30408 202 aa26.49■■□□□ 1.83
IRF1-207ENST00000463784 SALL2Q9Y467 1007 aaPredicted RBP26.49■■□□□ 1.83
IRF1-207ENST00000463784 HOXB7P09629 217 aa26.48■■□□□ 1.83
IRF1-207ENST00000463784 BCL2L12Q9HB09 334 aa26.48■■□□□ 1.83
IRF1-207ENST00000463784 IL16Q14005 1332 aa26.47■■□□□ 1.83
IRF1-207ENST00000463784 ZNF652Q9Y2D9 606 aa26.47■■□□□ 1.83
IRF1-207ENST00000463784 MYL6BP14649 208 aa26.46■■□□□ 1.83
IRF1-207ENST00000463784 WDR63Q8IWG1 891 aa26.46■■□□□ 1.83
IRF1-207ENST00000463784 RGL2O15211 777 aa26.45■■□□□ 1.82
IRF1-207ENST00000463784 CAMTA2O94983 1202 aa26.45■■□□□ 1.82
IRF1-207ENST00000463784 NFIXQ14938 502 aa26.45■■□□□ 1.82
IRF1-207ENST00000463784 CLEC4GQ6UXB4 293 aa26.45■■□□□ 1.82
IRF1-207ENST00000463784 CHMP4AQ9BY43 222 aa26.45■■□□□ 1.82
IRF1-207ENST00000463784 LAMB4A4D0S4 1761 aa26.44■■□□□ 1.82
IRF1-207ENST00000463784 KRT24Q2M2I5 525 aa26.44■■□□□ 1.82
IRF1-207ENST00000463784 DUSP27Q5VZP5 1158 aa26.44■■□□□ 1.82
IRF1-207ENST00000463784 POLRMTO00411 1230 aaKnown RBP26.43■■□□□ 1.82
IRF1-207ENST00000463784 DDR1Q08345 913 aa26.43■■□□□ 1.82
IRF1-207ENST00000463784 HDGFL1Q5TGJ6 251 aa26.43■■□□□ 1.82
IRF1-207ENST00000463784 KIF6Q6ZMV9 814 aa26.43■■□□□ 1.82
IRF1-207ENST00000463784 BICDL1Q6ZP65 573 aa26.43■■□□□ 1.82
IRF1-207ENST00000463784 NLGN2Q8NFZ4 835 aa26.43■■□□□ 1.82
IRF1-207ENST00000463784 NECTIN2Q92692 538 aa26.42■■□□□ 1.82
IRF1-207ENST00000463784 SERPINB2P05120 415 aa26.41■■□□□ 1.82
IRF1-207ENST00000463784 TBC1D9BQ66K14 1250 aa26.41■■□□□ 1.82
IRF1-207ENST00000463784 SETDB2Q96T68 719 aa26.41■■□□□ 1.82
IRF1-207ENST00000463784 ERVV-1B6SEH8 477 aa26.4■■□□□ 1.82
IRF1-207ENST00000463784 TGFB2P61812 414 aa26.4■■□□□ 1.82
IRF1-207ENST00000463784 MIER1Q8N108 512 aa26.4■■□□□ 1.82
IRF1-207ENST00000463784 DDX21Q9NR30 783 aaKnown RBP eCLIP26.4■■□□□ 1.82
IRF1-207ENST00000463784 PDIA6Q15084 440 aa26.39■■□□□ 1.82
IRF1-207ENST00000463784 DBF4Q9UBU7 674 aaPredicted RBP26.39■■□□□ 1.82
IRF1-207ENST00000463784 ELL2O00472 640 aaPredicted RBP26.38■■□□□ 1.81
IRF1-207ENST00000463784 GPR162Q16538 588 aa26.38■■□□□ 1.81
IRF1-207ENST00000463784 MAP3K15Q6ZN16 1313 aa26.38■■□□□ 1.81
IRF1-207ENST00000463784 TSR2Q969E8 191 aaKnown RBP26.37■■□□□ 1.81
IRF1-207ENST00000463784 CARMIL3Q8ND23 1372 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms