RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 KDM6BO15054 1643 aa6.25□□□□□ -1.41
SCFD1-204ENST00000463622 PTPRGP23470 1445 aa6.25□□□□□ -1.41
SCFD1-204ENST00000463622 F11P03951 625 aa6.25□□□□□ -1.41
SCFD1-204ENST00000463622 INHAP05111 366 aa6.25□□□□□ -1.41
SCFD1-204ENST00000463622 THBS1P07996 1170 aa6.25□□□□□ -1.41
SCFD1-204ENST00000463622 GNASQ5JWF2 1037 aa6.25□□□□□ -1.41
SCFD1-204ENST00000463622 ZNF385CQ66K41 422 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-204ENST00000463622 PCDHGA11Q9Y5H2 935 aa6.25□□□□□ -1.41
SCFD1-204ENST00000463622 ADGRL1O94910 1474 aa6.24□□□□□ -1.41
SCFD1-204ENST00000463622 TMEM229AB2RXF0 380 aa6.24□□□□□ -1.41
SCFD1-204ENST00000463622 ADAMTS2O95450 1211 aa6.24□□□□□ -1.41
SCFD1-204ENST00000463622 GTF2E1P29083 439 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-204ENST00000463622 WDR44Q5JSH3 913 aa6.24□□□□□ -1.41
SCFD1-204ENST00000463622 RUBCNLQ9H714 662 aa6.24□□□□□ -1.41
SCFD1-204ENST00000463622 ADCY10Q96PN6 1610 aa6.24□□□□□ -1.41
SCFD1-204ENST00000463622 KIAA0586Q9BVV6 1533 aa6.24□□□□□ -1.41
SCFD1-204ENST00000463622 IGF1RP08069 1367 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 EML3Q32P44 896 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 TBC1D9Q6ZT07 1266 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 SVOPQ8N4V2 548 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 NUCKS1Q9H1E3 243 aaKnown RBP6.23□□□□□ -1.41
SCFD1-204ENST00000463622 USP3Q9Y6I4 520 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 USP17L5A8MUK1 530 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 H7C1W4 665 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 PLA2G4AP47712 749 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 LYPD4Q6UWN0 246 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 PPARGC1BQ86YN6 1023 aaKnown RBP6.23□□□□□ -1.41
SCFD1-204ENST00000463622 UCN2Q96RP3 112 aa6.23□□□□□ -1.41
SCFD1-204ENST00000463622 SLURP2P0DP57 97 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 MSX1P28360 303 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 SMTNP53814 917 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 GTF2IP78347 998 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 PSME1Q06323 249 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCFD1-204ENST00000463622 RHBDD1Q8TEB9 315 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 AIDAQ96BJ3 306 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 NOD1Q9Y239 953 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 PLB1Q6P1J6 1458 aa6.22□□□□□ -1.41
SCFD1-204ENST00000463622 FOXR1Q6PIV2 292 aa6.21□□□□□ -1.41
SCFD1-204ENST00000463622 ADAMTS8Q9UP79 889 aa6.21□□□□□ -1.41
SCFD1-204ENST00000463622 ASXL2Q76L83 1435 aa6.21□□□□□ -1.42
SCFD1-204ENST00000463622 A0A1B0GTH6 734 aa6.21□□□□□ -1.42
SCFD1-204ENST00000463622 GMCL1Q96IK5 515 aa6.21□□□□□ -1.42
SCFD1-204ENST00000463622 PARP3Q9Y6F1 533 aa6.21□□□□□ -1.42
SCFD1-204ENST00000463622 TOP2BQ02880 1626 aa6.2□□□□□ -1.42
SCFD1-204ENST00000463622 GLI2P10070 1586 aa6.2□□□□□ -1.42
SCFD1-204ENST00000463622 TNIKQ9UKE5 1360 aa6.2□□□□□ -1.42
SCFD1-204ENST00000463622 ABCC2Q92887 1545 aa6.2□□□□□ -1.42
SCFD1-204ENST00000463622 SRSF11Q05519 484 aaKnown RBP6.2□□□□□ -1.42
SCFD1-204ENST00000463622 TBCELQ5QJ74 424 aa6.2□□□□□ -1.42
SCFD1-204ENST00000463622 PROSER2Q86WR7 435 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-204ENST00000463622 FNBP4Q8N3X1 1017 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-204ENST00000463622 TRERF1Q96PN7 1200 aa6.2□□□□□ -1.42
SCFD1-204ENST00000463622 HECW2Q9P2P5 1572 aa6.2□□□□□ -1.42
SCFD1-204ENST00000463622 A6NJY4 79 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 NFATC2IPQ8NCF5 419 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 MBIPQ9NS73 344 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 KIAA1024Q9UPX6 916 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 RUSC2Q8N2Y8 1516 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 UHRF1BP1LA0JNW5 1464 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 USP17L3A6NCW0 530 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 USP17L4A6NCW7 530 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 CELA2BP08218 269 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-204ENST00000463622 CSB-PGBD3P0DP91 1061 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 MX2P20592 715 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 USP17L2Q6R6M4 530 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 USP17L1Q7RTZ2 530 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 PGBD3Q8N328 593 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 GLMNQ92990 594 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 SLC4A9Q96Q91 983 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 NIFKQ9BYG3 293 aaKnown RBP6.19□□□□□ -1.42
SCFD1-204ENST00000463622 ZNF358Q9NW07 568 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 CABP1Q9NZU7 370 aa6.19□□□□□ -1.42
SCFD1-204ENST00000463622 IQSEC3Q9UPP2 1182 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-204ENST00000463622 ZBTB7BO15156 539 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-204ENST00000463622 ARHGEF15O94989 841 aa6.18□□□□□ -1.42
SCFD1-204ENST00000463622 UBAP2LQ14157 1087 aaKnown RBP6.18□□□□□ -1.42
SCFD1-204ENST00000463622 BIVM-ERCC5R4GMW8 1640 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 ATP9BO43861 1147 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 CLDN10P78369 228 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 TNS4Q8IZW8 715 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 ZNF295-AS1Q8N0V1 137 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 TPCN2Q8NHX9 752 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 ABHD17AQ96GS6 310 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 TFIP11Q9UBB9 837 aaKnown RBP6.17□□□□□ -1.42
SCFD1-204ENST00000463622 UACAQ9BZF9 1416 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 EPRSP07814 1512 aaKnown RBP6.17□□□□□ -1.42
SCFD1-204ENST00000463622 LZTS3O60299 673 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-204ENST00000463622 ATP4AP20648 1035 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 MTFR1Q15390 333 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 ACDQ96AP0 544 aa6.17□□□□□ -1.42
SCFD1-204ENST00000463622 MKRN1Q9UHC7 482 aaKnown RBP6.17□□□□□ -1.42
SCFD1-204ENST00000463622 CARMIL2Q6F5E8 1435 aa6.16□□□□□ -1.42
SCFD1-204ENST00000463622 TTBK1Q5TCY1 1321 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-204ENST00000463622 CDK2AP1O14519 115 aa6.16□□□□□ -1.42
SCFD1-204ENST00000463622 BNIP3LO60238 219 aa6.16□□□□□ -1.42
SCFD1-204ENST00000463622 ARSJQ5FYB0 599 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-204ENST00000463622 EFHC2Q5JST6 749 aa6.16□□□□□ -1.42
SCFD1-204ENST00000463622 CCDC102BQ68D86 513 aa6.16□□□□□ -1.42
SCFD1-204ENST00000463622 CARMIL1Q5VZK9 1371 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms