RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 SENP7Q9BQF6 1050 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 NBPF3Q9H094 633 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 SLKQ9H2G2 1235 aaPredicted RBP8.18□□□□□ -1.1
SGCE-209ENST00000462731 BCL2L12Q9HB09 334 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 DKK1O94907 266 aa8.17□□□□□ -1.1
SGCE-209ENST00000462731 VIL1P09327 827 aaKnown RBP8.17□□□□□ -1.1
SGCE-209ENST00000462731 NPR3P17342 541 aa8.17□□□□□ -1.1
SGCE-209ENST00000462731 DNAJB2P25686 324 aa8.17□□□□□ -1.1
SGCE-209ENST00000462731 C6orf132Q5T0Z8 1188 aa8.17□□□□□ -1.1
SGCE-209ENST00000462731 PLPP7Q8NBV4 271 aa8.17□□□□□ -1.1
SGCE-209ENST00000462731 RNPC3Q96LT9 517 aaKnown RBP8.17□□□□□ -1.1
SGCE-209ENST00000462731 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.17□□□□□ -1.1
SGCE-209ENST00000462731 EMILIN1Q9Y6C2 1016 aa8.17□□□□□ -1.1
SGCE-209ENST00000462731 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
SGCE-209ENST00000462731 FAM13AO94988 1023 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 SEC13P55735 322 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 ATP2B2Q01814 1243 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 MTMR3Q13615 1198 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 UBE4AQ14139 1066 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 MAP7D1Q3KQU3 841 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 JPH4Q96JJ6 628 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 PKNOX2Q96KN3 472 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 MTA3Q9BTC8 594 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 QTRT2Q9H974 415 aaKnown RBP8.16□□□□□ -1.1
SGCE-209ENST00000462731 RPS6KL1Q9Y6S9 549 aa8.16□□□□□ -1.1
SGCE-209ENST00000462731 WDHD1O75717 1129 aaPredicted RBP8.15□□□□□ -1.1
SGCE-209ENST00000462731 MAPK8P45983 427 aa8.15□□□□□ -1.1
SGCE-209ENST00000462731 GJA8P48165 433 aa8.15□□□□□ -1.1
SGCE-209ENST00000462731 PLCB3Q01970 1234 aa8.15□□□□□ -1.1
SGCE-209ENST00000462731 NYAP1Q6ZVC0 841 aa8.15□□□□□ -1.1
SGCE-209ENST00000462731 HELQQ8TDG4 1101 aa8.15□□□□□ -1.1
SGCE-209ENST00000462731 CDCA7LQ96GN5 454 aa8.15□□□□□ -1.1
SGCE-209ENST00000462731 DMRTB1Q96MA1 342 aa8.15□□□□□ -1.1
SGCE-209ENST00000462731 TMEM134Q9H6X4 195 aa8.15□□□□□ -1.1
SGCE-209ENST00000462731 TTF2Q9UNY4 1162 aaKnown RBP8.15□□□□□ -1.1
SGCE-209ENST00000462731 EXOC5O00471 708 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 PTPREP23469 700 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 MCCP23508 829 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 GCGRP47871 477 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 RACK1P63244 317 aaKnown RBP8.14□□□□□ -1.11
SGCE-209ENST00000462731 GUCA2AQ02747 115 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 EHHADHQ08426 723 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 KCNH2Q12809 1159 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 ZNF394Q53GI3 561 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 CRELD1Q96HD1 420 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 TCEAL9Q9UHQ7 104 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 CHIC2Q9UKJ5 165 aa8.14□□□□□ -1.11
SGCE-209ENST00000462731 ATF4P18848 351 aaPredicted RBP8.13□□□□□ -1.11
SGCE-209ENST00000462731 ZEB1P37275 1124 aaPredicted RBP8.13□□□□□ -1.11
SGCE-209ENST00000462731 USP48Q86UV5 1035 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 FAM9BQ8IZU0 186 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 PHTF2Q8N3S3 785 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 ZNF454Q8N9F8 522 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 ANKK1Q8NFD2 765 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 COL26A1Q96A83 441 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 JADE2Q9NQC1 790 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 RNF19AQ9NV58 838 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 NOD1Q9Y239 953 aa8.13□□□□□ -1.11
SGCE-209ENST00000462731 RBM19Q9Y4C8 960 aaKnown RBP8.13□□□□□ -1.11
SGCE-209ENST00000462731 GIGYF1O75420 1035 aaPredicted RBP8.12□□□□□ -1.11
SGCE-209ENST00000462731 LIG1P18858 919 aa8.12□□□□□ -1.11
SGCE-209ENST00000462731 EVA1CP58658 441 aa8.12□□□□□ -1.11
SGCE-209ENST00000462731 PTPN12Q05209 780 aaKnown RBP8.12□□□□□ -1.11
SGCE-209ENST00000462731 ARSHQ5FYA8 562 aa8.12□□□□□ -1.11
SGCE-209ENST00000462731 CEP89Q96ST8 783 aa8.12□□□□□ -1.11
SGCE-209ENST00000462731 IER2Q9BTL4 223 aa8.12□□□□□ -1.11
SGCE-209ENST00000462731 PCDHGB7Q9Y5F8 929 aa8.12□□□□□ -1.11
SGCE-209ENST00000462731 CCDC189A1A4V9 331 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 C6orf229H3BNL8 230 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 KIF3BO15066 747 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 PER1O15534 1290 aaPredicted RBP8.11□□□□□ -1.11
SGCE-209ENST00000462731 CDC45O75419 566 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 OS9Q13438 667 aaPredicted RBP8.11□□□□□ -1.11
SGCE-209ENST00000462731 ENOX2Q16206 610 aaKnown RBP8.11□□□□□ -1.11
SGCE-209ENST00000462731 WDR78Q5VTH9 848 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 MKNK1Q9BUB5 465 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 SRA1Q9HD15 236 aaKnown RBP8.11□□□□□ -1.11
SGCE-209ENST00000462731 SIRPGQ9P1W8 387 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 WWC3Q9ULE0 1092 aa8.11□□□□□ -1.11
SGCE-209ENST00000462731 PLIN1O60240 522 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 NR1I2O75469 434 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 GNA15P30679 374 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 BCAMP50895 628 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 PPP4CP60510 307 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 SAFB2Q14151 953 aaKnown RBP eCLIP8.1□□□□□ -1.11
SGCE-209ENST00000462731 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 AMOTL1Q8IY63 956 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 HLA-CQ95604 372 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 ALKBH8Q96BT7 664 aaKnown RBP8.1□□□□□ -1.11
SGCE-209ENST00000462731 IL17RAQ96F46 866 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 SRPK1Q96SB4 655 aaKnown RBP8.1□□□□□ -1.11
SGCE-209ENST00000462731 SWAP70Q9UH65 585 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 KIAA1024Q9UPX6 916 aa8.1□□□□□ -1.11
SGCE-209ENST00000462731 ZBTB7BO15156 539 aaPredicted RBP8.09□□□□□ -1.11
SGCE-209ENST00000462731 IGHA2P01877 340 aa8.09□□□□□ -1.11
SGCE-209ENST00000462731 BDNFP23560 247 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms