RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 CNTNAP4Q9C0A0 1308 aa24.94■■□□□ 1.58
XPA-202ENST00000462523 CRKLP46109 303 aaKnown RBP24.94■■□□□ 1.58
XPA-202ENST00000462523 TSPYL6Q8N831 410 aa24.94■■□□□ 1.58
XPA-202ENST00000462523 MYH16Q9H6N6 1097 aa24.94■■□□□ 1.58
XPA-202ENST00000462523 INTS5Q6P9B9 1019 aaKnown RBP24.93■■□□□ 1.58
XPA-202ENST00000462523 TEX13AQ9BXU3 409 aaPredicted RBP24.93■■□□□ 1.58
XPA-202ENST00000462523 DUSP27Q5VZP5 1158 aa24.92■■□□□ 1.58
XPA-202ENST00000462523 QSER1Q2KHR3 1735 aa24.92■■□□□ 1.58
XPA-202ENST00000462523 ELL2O00472 640 aaPredicted RBP24.91■■□□□ 1.58
XPA-202ENST00000462523 EXOSC9Q06265 439 aaKnown RBP24.91■■□□□ 1.58
XPA-202ENST00000462523 SLC15A2Q16348 729 aa24.91■■□□□ 1.58
XPA-202ENST00000462523 RC3H1Q5TC82 1133 aaKnown RBP24.91■■□□□ 1.58
XPA-202ENST00000462523 SMIM5Q71RC9 77 aa24.91■■□□□ 1.58
XPA-202ENST00000462523 YTHDC1Q96MU7 727 aaKnown RBP24.91■■□□□ 1.58
XPA-202ENST00000462523 STARD3NLO95772 234 aa24.9■■□□□ 1.58
XPA-202ENST00000462523 A1BGP04217 495 aa24.9■■□□□ 1.58
XPA-202ENST00000462523 CCDC87Q9NVE4 849 aa24.9■■□□□ 1.58
XPA-202ENST00000462523 ZBTB1Q9Y2K1 713 aa24.9■■□□□ 1.58
XPA-202ENST00000462523 HOXB7P09629 217 aa24.88■■□□□ 1.57
XPA-202ENST00000462523 PIP4K2AP48426 406 aaPredicted RBP24.88■■□□□ 1.57
XPA-202ENST00000462523 AK7Q96M32 723 aa24.88■■□□□ 1.57
XPA-202ENST00000462523 GNPATO15228 680 aa24.88■■□□□ 1.57
XPA-202ENST00000462523 STK32BQ9NY57 414 aa24.88■■□□□ 1.57
XPA-202ENST00000462523 NBPF26B4DH59 902 aa24.87■■□□□ 1.57
XPA-202ENST00000462523 NBPF14Q5TI25 921 aa24.87■■□□□ 1.57
XPA-202ENST00000462523 NBPF10Q6P3W6 841 aaKnown RBP24.87■■□□□ 1.57
XPA-202ENST00000462523 NBPF15Q8N660 670 aa24.87■■□□□ 1.57
XPA-202ENST00000462523 C4AP0C0L4 1744 aa24.86■■□□□ 1.57
XPA-202ENST00000462523 EIF2S2P20042 333 aaKnown RBP24.86■■□□□ 1.57
XPA-202ENST00000462523 TWISTNBQ3B726 338 aaPredicted RBP24.86■■□□□ 1.57
XPA-202ENST00000462523 NECTIN2Q92692 538 aa24.86■■□□□ 1.57
XPA-202ENST00000462523 TFCP2L1Q9NZI6 479 aa24.86■■□□□ 1.57
XPA-202ENST00000462523 PNPLA7Q6ZV29 1317 aa24.86■■□□□ 1.57
XPA-202ENST00000462523 HMGB2P26583 209 aaKnown RBP24.85■■□□□ 1.57
XPA-202ENST00000462523 SOS1Q07889 1333 aaPredicted RBP24.85■■□□□ 1.57
XPA-202ENST00000462523 RPS6KA4O75676 772 aa24.84■■□□□ 1.57
XPA-202ENST00000462523 CANXP27824 592 aaKnown RBP24.84■■□□□ 1.57
XPA-202ENST00000462523 R3HDM1Q15032 1099 aaKnown RBP24.84■■□□□ 1.57
XPA-202ENST00000462523 VAMP4O75379 141 aa24.84■■□□□ 1.57
XPA-202ENST00000462523 PDIA6Q15084 440 aa24.84■■□□□ 1.57
XPA-202ENST00000462523 HDGFL1Q5TGJ6 251 aa24.84■■□□□ 1.57
XPA-202ENST00000462523 PDGFDQ9GZP0 370 aaPredicted RBP24.84■■□□□ 1.57
XPA-202ENST00000462523 CASZ1Q86V15 1759 aa24.84■■□□□ 1.57
XPA-202ENST00000462523 PROSER3Q2NL68 480 aa24.83■■□□□ 1.57
XPA-202ENST00000462523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.82■■□□□ 1.56
XPA-202ENST00000462523 PSDA5PKW4 1024 aaPredicted RBP24.82■■□□□ 1.56
XPA-202ENST00000462523 PHF14O94880 888 aa24.82■■□□□ 1.56
XPA-202ENST00000462523 EIF5P55010 431 aaKnown RBP24.82■■□□□ 1.56
XPA-202ENST00000462523 LRP10Q7Z4F1 713 aa24.82■■□□□ 1.56
XPA-202ENST00000462523 RTCBQ9Y3I0 505 aaKnown RBP24.82■■□□□ 1.56
XPA-202ENST00000462523 SSFA2P28290 1259 aa24.81■■□□□ 1.56
XPA-202ENST00000462523 ANXA1P04083 346 aa24.8■■□□□ 1.56
XPA-202ENST00000462523 COL23A1Q86Y22 540 aaPredicted RBP24.8■■□□□ 1.56
XPA-202ENST00000462523 CHPF2Q9P2E5 772 aa24.8■■□□□ 1.56
XPA-202ENST00000462523 ERBB4Q15303 1308 aa24.8■■□□□ 1.56
XPA-202ENST00000462523 COL15A1P39059 1388 aa24.8■■□□□ 1.56
XPA-202ENST00000462523 IL6STP40189 918 aaPredicted RBP24.8■■□□□ 1.56
XPA-202ENST00000462523 ARHGEF1Q92888 912 aaKnown RBP24.79■■□□□ 1.56
XPA-202ENST00000462523 MYL6BP14649 208 aa24.78■■□□□ 1.56
XPA-202ENST00000462523 TCERG1O14776 1098 aaKnown RBP24.77■■□□□ 1.56
XPA-202ENST00000462523 DDX21Q9NR30 783 aaKnown RBP eCLIP24.77■■□□□ 1.56
XPA-202ENST00000462523 ADRA2BP18089 450 aa24.76■■□□□ 1.55
XPA-202ENST00000462523 TRAPPC3LQ5T215 181 aa24.76■■□□□ 1.55
XPA-202ENST00000462523 ZNF330Q9Y3S2 320 aaPredicted RBP24.76■■□□□ 1.55
XPA-202ENST00000462523 CCDC30Q5VVM6 783 aa24.76■■□□□ 1.55
XPA-202ENST00000462523 DBF4Q9UBU7 674 aaPredicted RBP24.76■■□□□ 1.55
XPA-202ENST00000462523 BCORQ6W2J9 1755 aa24.75■■□□□ 1.55
XPA-202ENST00000462523 SCN7AQ01118 1682 aa24.75■■□□□ 1.55
XPA-202ENST00000462523 FLAD1Q8NFF5 587 aa24.74■■□□□ 1.55
XPA-202ENST00000462523 SRP68Q9UHB9 627 aaKnown RBP24.73■■□□□ 1.55
XPA-202ENST00000462523 TBC1D2BQ9UPU7 963 aa24.72■■□□□ 1.55
XPA-202ENST00000462523 USP42Q9H9J4 1324 aaKnown RBP24.72■■□□□ 1.55
XPA-202ENST00000462523 TTLL7Q6ZT98 887 aa24.71■■□□□ 1.55
XPA-202ENST00000462523 PHAXQ9H814 394 aaKnown RBP24.71■■□□□ 1.55
XPA-202ENST00000462523 CACNA1FO60840 1977 aa24.71■■□□□ 1.55
XPA-202ENST00000462523 MSH5O43196 834 aa24.71■■□□□ 1.55
XPA-202ENST00000462523 RFC4P35249 363 aa24.71■■□□□ 1.55
XPA-202ENST00000462523 CT47B1P0C2W7 299 aaPredicted RBP24.7■■□□□ 1.54
XPA-202ENST00000462523 DZIP3Q86Y13 1208 aaKnown RBP24.7■■□□□ 1.54
XPA-202ENST00000462523 HYPKQ9NX55 129 aa24.7■■□□□ 1.54
XPA-202ENST00000462523 NARFQ9UHQ1 456 aa24.7■■□□□ 1.54
XPA-202ENST00000462523 COL24A1Q17RW2 1714 aa24.69■■□□□ 1.54
XPA-202ENST00000462523 SLC4A2P04920 1241 aa24.69■■□□□ 1.54
XPA-202ENST00000462523 COPS6Q7L5N1 327 aa24.69■■□□□ 1.54
XPA-202ENST00000462523 G2E3Q7L622 706 aa24.69■■□□□ 1.54
XPA-202ENST00000462523 XAGE3Q8WTP9 111 aa24.69■■□□□ 1.54
XPA-202ENST00000462523 STK31Q9BXU1 1019 aa24.69■■□□□ 1.54
XPA-202ENST00000462523 CHMP4AQ9BY43 222 aa24.69■■□□□ 1.54
XPA-202ENST00000462523 BCL2L12Q9HB09 334 aa24.69■■□□□ 1.54
XPA-202ENST00000462523 A0A087WZG4 1122 aa24.68■■□□□ 1.54
XPA-202ENST00000462523 CAMTA2O94983 1202 aa24.68■■□□□ 1.54
XPA-202ENST00000462523 GYS1P13807 737 aa24.68■■□□□ 1.54
XPA-202ENST00000462523 USPL1Q5W0Q7 1092 aa24.68■■□□□ 1.54
XPA-202ENST00000462523 SSH1Q8WYL5 1049 aa24.68■■□□□ 1.54
XPA-202ENST00000462523 SRCAPQ6ZRS2 3230 aa24.68■■□□□ 1.54
XPA-202ENST00000462523 ZNF428Q96B54 188 aa24.67■■□□□ 1.54
XPA-202ENST00000462523 AIMP1Q12904 312 aaKnown RBP24.67■■□□□ 1.54
XPA-202ENST00000462523 ARXQ96QS3 562 aa24.67■■□□□ 1.54
XPA-202ENST00000462523 NUP98P52948 1817 aa24.66■■□□□ 1.54
XPA-202ENST00000462523 ZBTB7AO95365 584 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms