RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 APAF1O14727 1248 aa20.84■□□□□ 0.93
ERCC3-206ENST00000462306 STARD3NLO95772 234 aa20.84■□□□□ 0.93
ERCC3-206ENST00000462306 ARXQ96QS3 562 aa20.84■□□□□ 0.93
ERCC3-206ENST00000462306 ZBTB1Q9Y2K1 713 aa20.84■□□□□ 0.93
ERCC3-206ENST00000462306 KDM3BQ7LBC6 1761 aa20.84■□□□□ 0.93
ERCC3-206ENST00000462306 SOS1Q07889 1333 aaPredicted RBP20.83■□□□□ 0.93
ERCC3-206ENST00000462306 POLD1P28340 1107 aa20.83■□□□□ 0.93
ERCC3-206ENST00000462306 PRAMEF22A3QJZ6 481 aa20.82■□□□□ 0.92
ERCC3-206ENST00000462306 USP16Q9Y5T5 823 aa20.82■□□□□ 0.92
ERCC3-206ENST00000462306 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
ERCC3-206ENST00000462306 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
ERCC3-206ENST00000462306 RFC4P35249 363 aa20.81■□□□□ 0.92
ERCC3-206ENST00000462306 EIF4A1P60842 406 aaKnown RBP20.8■□□□□ 0.92
ERCC3-206ENST00000462306 BABAM1Q9NWV8 329 aa20.8■□□□□ 0.92
ERCC3-206ENST00000462306 GYS1P13807 737 aa20.79■□□□□ 0.92
ERCC3-206ENST00000462306 CANXP27824 592 aaKnown RBP20.79■□□□□ 0.92
ERCC3-206ENST00000462306 FHDC1Q9C0D6 1143 aaPredicted RBP20.79■□□□□ 0.92
ERCC3-206ENST00000462306 TSPYL4Q9UJ04 414 aa20.79■□□□□ 0.92
ERCC3-206ENST00000462306 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
ERCC3-206ENST00000462306 COL15A1P39059 1388 aa20.78■□□□□ 0.92
ERCC3-206ENST00000462306 A1BGP04217 495 aa20.78■□□□□ 0.92
ERCC3-206ENST00000462306 EIF5P55010 431 aaKnown RBP20.78■□□□□ 0.92
ERCC3-206ENST00000462306 SRP68Q9UHB9 627 aaKnown RBP20.78■□□□□ 0.92
ERCC3-206ENST00000462306 CHL1O00533 1208 aa20.77■□□□□ 0.92
ERCC3-206ENST00000462306 GIGYF1O75420 1035 aaPredicted RBP20.77■□□□□ 0.92
ERCC3-206ENST00000462306 NLGN1Q8N2Q7 840 aa20.77■□□□□ 0.92
ERCC3-206ENST00000462306 SYT17Q9BSW7 474 aa20.77■□□□□ 0.92
ERCC3-206ENST00000462306 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
ERCC3-206ENST00000462306 MMP10P09238 476 aa20.74■□□□□ 0.91
ERCC3-206ENST00000462306 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
ERCC3-206ENST00000462306 NBPF26B4DH59 902 aa20.73■□□□□ 0.91
ERCC3-206ENST00000462306 ZPR1O75312 459 aa20.73■□□□□ 0.91
ERCC3-206ENST00000462306 PIP4K2AP48426 406 aaPredicted RBP20.73■□□□□ 0.91
ERCC3-206ENST00000462306 FKBP8Q14318 412 aa20.73■□□□□ 0.91
ERCC3-206ENST00000462306 USPL1Q5W0Q7 1092 aa20.73■□□□□ 0.91
ERCC3-206ENST00000462306 NBPF10Q6P3W6 841 aaKnown RBP20.73■□□□□ 0.91
ERCC3-206ENST00000462306 NBPF15Q8N660 670 aa20.73■□□□□ 0.91
ERCC3-206ENST00000462306 LAMB4A4D0S4 1761 aa20.72■□□□□ 0.91
ERCC3-206ENST00000462306 A0A087WZG4 1122 aa20.72■□□□□ 0.91
ERCC3-206ENST00000462306 SENP3-EIF4A1A0A087X0R7 540 aa20.72■□□□□ 0.91
ERCC3-206ENST00000462306 ZNF853P0CG23 659 aa20.72■□□□□ 0.91
ERCC3-206ENST00000462306 FAM9BQ8IZU0 186 aa20.72■□□□□ 0.91
ERCC3-206ENST00000462306 CFAP44Q96MT7 982 aa20.72■□□□□ 0.91
ERCC3-206ENST00000462306 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
ERCC3-206ENST00000462306 LAS1LQ9Y4W2 734 aaKnown RBP20.72■□□□□ 0.91
ERCC3-206ENST00000462306 CCDC27Q2M243 656 aa20.71■□□□□ 0.91
ERCC3-206ENST00000462306 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
ERCC3-206ENST00000462306 ZNF330Q9Y3S2 320 aaPredicted RBP20.71■□□□□ 0.91
ERCC3-206ENST00000462306 KLHL34Q8N239 644 aa20.7■□□□□ 0.9
ERCC3-206ENST00000462306 TM4SF1P30408 202 aa20.69■□□□□ 0.9
ERCC3-206ENST00000462306 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
ERCC3-206ENST00000462306 TBC1D2BQ9UPU7 963 aa20.69■□□□□ 0.9
ERCC3-206ENST00000462306 KRT24Q2M2I5 525 aa20.68■□□□□ 0.9
ERCC3-206ENST00000462306 WWC1Q8IX03 1113 aa20.68■□□□□ 0.9
ERCC3-206ENST00000462306 NLGN2Q8NFZ4 835 aa20.68■□□□□ 0.9
ERCC3-206ENST00000462306 MBIPQ9NS73 344 aa20.68■□□□□ 0.9
ERCC3-206ENST00000462306 IFT57Q9NWB7 429 aa20.68■□□□□ 0.9
ERCC3-206ENST00000462306 CD2APQ9Y5K6 639 aa20.68■□□□□ 0.9
ERCC3-206ENST00000462306 DDR1Q08345 913 aa20.67■□□□□ 0.9
ERCC3-206ENST00000462306 PARP3Q9Y6F1 533 aa20.67■□□□□ 0.9
ERCC3-206ENST00000462306 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
ERCC3-206ENST00000462306 CAMTA2O94983 1202 aa20.66■□□□□ 0.9
ERCC3-206ENST00000462306 GNAI1P63096 354 aa20.66■□□□□ 0.9
ERCC3-206ENST00000462306 NFIXQ14938 502 aa20.66■□□□□ 0.9
ERCC3-206ENST00000462306 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
ERCC3-206ENST00000462306 DZIP3Q86Y13 1208 aaKnown RBP20.66■□□□□ 0.9
ERCC3-206ENST00000462306 SCN7AQ01118 1682 aa20.66■□□□□ 0.9
ERCC3-206ENST00000462306 POLRMTO00411 1230 aaKnown RBP20.65■□□□□ 0.9
ERCC3-206ENST00000462306 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
ERCC3-206ENST00000462306 ERBB4Q15303 1308 aa20.64■□□□□ 0.89
ERCC3-206ENST00000462306 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
ERCC3-206ENST00000462306 PDIA6Q15084 440 aa20.63■□□□□ 0.89
ERCC3-206ENST00000462306 C10orf71Q711Q0 1435 aa20.62■□□□□ 0.89
ERCC3-206ENST00000462306 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
ERCC3-206ENST00000462306 TBC1D9BQ66K14 1250 aa20.62■□□□□ 0.89
ERCC3-206ENST00000462306 LRP10Q7Z4F1 713 aa20.62■□□□□ 0.89
ERCC3-206ENST00000462306 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
ERCC3-206ENST00000462306 IL16Q14005 1332 aa20.61■□□□□ 0.89
ERCC3-206ENST00000462306 HOXB7P09629 217 aa20.61■□□□□ 0.89
ERCC3-206ENST00000462306 MYL6BP14649 208 aa20.61■□□□□ 0.89
ERCC3-206ENST00000462306 KIF13BQ9NQT8 1826 aa20.61■□□□□ 0.89
ERCC3-206ENST00000462306 RGL2O15211 777 aa20.6■□□□□ 0.89
ERCC3-206ENST00000462306 PROSER3Q2NL68 480 aa20.6■□□□□ 0.89
ERCC3-206ENST00000462306 DUSP27Q5VZP5 1158 aa20.6■□□□□ 0.89
ERCC3-206ENST00000462306 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
ERCC3-206ENST00000462306 BICDL1Q6ZP65 573 aa20.6■□□□□ 0.89
ERCC3-206ENST00000462306 NGEFQ8N5V2 710 aa20.6■□□□□ 0.89
ERCC3-206ENST00000462306 NECTIN2Q92692 538 aa20.6■□□□□ 0.89
ERCC3-206ENST00000462306 TTLL7Q6ZT98 887 aa20.59■□□□□ 0.89
ERCC3-206ENST00000462306 NRXN2Q9P2S2 1712 aa20.58■□□□□ 0.89
ERCC3-206ENST00000462306 ANXA1P04083 346 aa20.58■□□□□ 0.89
ERCC3-206ENST00000462306 SERPINB2P05120 415 aa20.58■□□□□ 0.89
ERCC3-206ENST00000462306 WDR63Q8IWG1 891 aa20.58■□□□□ 0.89
ERCC3-206ENST00000462306 MIER1Q8N108 512 aa20.58■□□□□ 0.89
ERCC3-206ENST00000462306 TSR2Q969E8 191 aaKnown RBP20.58■□□□□ 0.89
ERCC3-206ENST00000462306 TGFB2P61812 414 aa20.57■□□□□ 0.88
ERCC3-206ENST00000462306 HLFQ16534 295 aa20.57■□□□□ 0.88
ERCC3-206ENST00000462306 HDGFL1Q5TGJ6 251 aa20.57■□□□□ 0.88
ERCC3-206ENST00000462306 C8orf58Q8NAV2 365 aa20.57■□□□□ 0.88
ERCC3-206ENST00000462306 KIAA1551Q9HCM1 1747 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms