RNA–Protein interactions for RNA: ENST00000462219.5

LINC00879-201, long intergenic non-protein coding RNA 879, humanhuman

TSL 2

Gene LINC00879, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-201ENST00000462219 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
LINC00879-201ENST00000462219 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
LINC00879-201ENST00000462219 C4AP0C0L4 1744 aa17■□□□□ 0.31
LINC00879-201ENST00000462219 SSFA2P28290 1259 aa17■□□□□ 0.31
LINC00879-201ENST00000462219 TEX13AQ9BXU3 409 aaPredicted RBP17■□□□□ 0.31
LINC00879-201ENST00000462219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.99■□□□□ 0.31
LINC00879-201ENST00000462219 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
LINC00879-201ENST00000462219 FLAD1Q8NFF5 587 aa16.99■□□□□ 0.31
LINC00879-201ENST00000462219 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
LINC00879-201ENST00000462219 ZBTB1Q9Y2K1 713 aa16.99■□□□□ 0.31
LINC00879-201ENST00000462219 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
LINC00879-201ENST00000462219 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
LINC00879-201ENST00000462219 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
LINC00879-201ENST00000462219 IFT57Q9NWB7 429 aa16.98■□□□□ 0.31
LINC00879-201ENST00000462219 RTCBQ9Y3I0 505 aaKnown RBP16.98■□□□□ 0.31
LINC00879-201ENST00000462219 LRP5O75197 1615 aa16.97■□□□□ 0.31
LINC00879-201ENST00000462219 PHF14O94880 888 aa16.97■□□□□ 0.31
LINC00879-201ENST00000462219 ZBTB7AO95365 584 aa16.97■□□□□ 0.31
LINC00879-201ENST00000462219 STARD3NLO95772 234 aa16.97■□□□□ 0.31
LINC00879-201ENST00000462219 A1BGP04217 495 aa16.97■□□□□ 0.31
LINC00879-201ENST00000462219 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
LINC00879-201ENST00000462219 SLC16A10Q8TF71 515 aa16.97■□□□□ 0.31
LINC00879-201ENST00000462219 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
LINC00879-201ENST00000462219 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
LINC00879-201ENST00000462219 GNAI1P63096 354 aa16.96■□□□□ 0.31
LINC00879-201ENST00000462219 KRT24Q2M2I5 525 aa16.96■□□□□ 0.31
LINC00879-201ENST00000462219 TRAPPC3LQ5T215 181 aa16.96■□□□□ 0.31
LINC00879-201ENST00000462219 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
LINC00879-201ENST00000462219 MTFR1LQ9H019 292 aa16.96■□□□□ 0.31
LINC00879-201ENST00000462219 IL16Q14005 1332 aa16.96■□□□□ 0.3
LINC00879-201ENST00000462219 ZNF521Q96K83 1311 aa16.96■□□□□ 0.3
LINC00879-201ENST00000462219 CANXP27824 592 aaKnown RBP16.95■□□□□ 0.3
LINC00879-201ENST00000462219 PTGER2P43116 358 aa16.95■□□□□ 0.3
LINC00879-201ENST00000462219 EIF5P55010 431 aaKnown RBP16.95■□□□□ 0.3
LINC00879-201ENST00000462219 WDR63Q8IWG1 891 aa16.95■□□□□ 0.3
LINC00879-201ENST00000462219 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
LINC00879-201ENST00000462219 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
LINC00879-201ENST00000462219 SPON1Q9HCB6 807 aa16.94■□□□□ 0.3
LINC00879-201ENST00000462219 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
LINC00879-201ENST00000462219 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
LINC00879-201ENST00000462219 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
LINC00879-201ENST00000462219 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
LINC00879-201ENST00000462219 IL6STP40189 918 aaPredicted RBP16.92■□□□□ 0.3
LINC00879-201ENST00000462219 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
LINC00879-201ENST00000462219 COL15A1P39059 1388 aa16.91■□□□□ 0.3
LINC00879-201ENST00000462219 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
LINC00879-201ENST00000462219 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
LINC00879-201ENST00000462219 SRCAPQ6ZRS2 3230 aa16.91■□□□□ 0.3
LINC00879-201ENST00000462219 GYS1P13807 737 aa16.9■□□□□ 0.3
LINC00879-201ENST00000462219 RFC4P35249 363 aa16.9■□□□□ 0.3
LINC00879-201ENST00000462219 C8orf58Q8NAV2 365 aa16.9■□□□□ 0.3
LINC00879-201ENST00000462219 USP42Q9H9J4 1324 aaKnown RBP16.9■□□□□ 0.3
LINC00879-201ENST00000462219 PDIA6Q15084 440 aa16.89■□□□□ 0.29
LINC00879-201ENST00000462219 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
LINC00879-201ENST00000462219 MSL1Q68DK7 614 aa16.89■□□□□ 0.29
LINC00879-201ENST00000462219 BCL2L12Q9HB09 334 aa16.89■□□□□ 0.29
LINC00879-201ENST00000462219 NARFQ9UHQ1 456 aa16.89■□□□□ 0.29
LINC00879-201ENST00000462219 BCORQ6W2J9 1755 aa16.88■□□□□ 0.29
LINC00879-201ENST00000462219 HOXB7P09629 217 aa16.88■□□□□ 0.29
LINC00879-201ENST00000462219 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
LINC00879-201ENST00000462219 LRP10Q7Z4F1 713 aa16.88■□□□□ 0.29
LINC00879-201ENST00000462219 TSPYL6Q8N831 410 aa16.88■□□□□ 0.29
LINC00879-201ENST00000462219 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
LINC00879-201ENST00000462219 USPL1Q5W0Q7 1092 aa16.87■□□□□ 0.29
LINC00879-201ENST00000462219 ERBB4Q15303 1308 aa16.87■□□□□ 0.29
LINC00879-201ENST00000462219 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
LINC00879-201ENST00000462219 SCN7AQ01118 1682 aa16.87■□□□□ 0.29
LINC00879-201ENST00000462219 A0A087WZG4 1122 aa16.86■□□□□ 0.29
LINC00879-201ENST00000462219 FKBP8Q14318 412 aa16.86■□□□□ 0.29
LINC00879-201ENST00000462219 PROSER3Q2NL68 480 aa16.86■□□□□ 0.29
LINC00879-201ENST00000462219 NLGN1Q8N2Q7 840 aa16.86■□□□□ 0.29
LINC00879-201ENST00000462219 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
LINC00879-201ENST00000462219 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
LINC00879-201ENST00000462219 NUP98P52948 1817 aa16.85■□□□□ 0.29
LINC00879-201ENST00000462219 ZPR1O75312 459 aa16.85■□□□□ 0.29
LINC00879-201ENST00000462219 NECTIN2Q92692 538 aa16.85■□□□□ 0.29
LINC00879-201ENST00000462219 CAMTA2O94983 1202 aa16.84■□□□□ 0.29
LINC00879-201ENST00000462219 ANXA1P04083 346 aa16.84■□□□□ 0.29
LINC00879-201ENST00000462219 MYL6BP14649 208 aa16.84■□□□□ 0.29
LINC00879-201ENST00000462219 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
LINC00879-201ENST00000462219 DZIP3Q86Y13 1208 aaKnown RBP16.84■□□□□ 0.29
LINC00879-201ENST00000462219 POLD1P28340 1107 aa16.83■□□□□ 0.28
LINC00879-201ENST00000462219 TM4SF1P30408 202 aa16.83■□□□□ 0.28
LINC00879-201ENST00000462219 AFDNP55196 1824 aaKnown RBP16.83■□□□□ 0.28
LINC00879-201ENST00000462219 GOLGA2Q08379 1002 aa16.83■□□□□ 0.28
LINC00879-201ENST00000462219 SLFN5Q08AF3 891 aa16.83■□□□□ 0.28
LINC00879-201ENST00000462219 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
LINC00879-201ENST00000462219 ARXQ96QS3 562 aa16.83■□□□□ 0.28
LINC00879-201ENST00000462219 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
LINC00879-201ENST00000462219 CACNA1FO60840 1977 aa16.82■□□□□ 0.28
LINC00879-201ENST00000462219 MMP10P09238 476 aa16.82■□□□□ 0.28
LINC00879-201ENST00000462219 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
LINC00879-201ENST00000462219 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
LINC00879-201ENST00000462219 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
LINC00879-201ENST00000462219 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
LINC00879-201ENST00000462219 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
LINC00879-201ENST00000462219 TWISTNBQ3B726 338 aaPredicted RBP16.81■□□□□ 0.28
LINC00879-201ENST00000462219 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
LINC00879-201ENST00000462219 NRXN2Q9P2S2 1712 aa16.8■□□□□ 0.28
LINC00879-201ENST00000462219 VAMP4O75379 141 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms