RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
CALD1-213ENST00000462181 A0A1B0GTH6 734 aa10.59□□□□□ -0.71
CALD1-213ENST00000462181 SERTM1A2A2V5 107 aa10.59□□□□□ -0.71
CALD1-213ENST00000462181 PPFIA3O75145 1194 aa10.59□□□□□ -0.71
CALD1-213ENST00000462181 FAM69CQ0P6D2 419 aa10.59□□□□□ -0.71
CALD1-213ENST00000462181 ZNF295-AS1Q8N0V1 137 aa10.59□□□□□ -0.71
CALD1-213ENST00000462181 L3MBTL2Q969R5 705 aa10.59□□□□□ -0.71
CALD1-213ENST00000462181 IGFBP4P22692 258 aa10.58□□□□□ -0.72
CALD1-213ENST00000462181 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
CALD1-213ENST00000462181 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
CALD1-213ENST00000462181 C21orf2O43822 256 aa10.57□□□□□ -0.72
CALD1-213ENST00000462181 F11P03951 625 aa10.57□□□□□ -0.72
CALD1-213ENST00000462181 VEGFBP49765 207 aa10.57□□□□□ -0.72
CALD1-213ENST00000462181 RIPOR1Q6ZS17 1223 aa10.57□□□□□ -0.72
CALD1-213ENST00000462181 ZDHHC1Q8WTX9 485 aa10.57□□□□□ -0.72
CALD1-213ENST00000462181 PRIMPOLQ96LW4 560 aa10.57□□□□□ -0.72
CALD1-213ENST00000462181 TERTO14746 1132 aaKnown RBP10.56□□□□□ -0.72
CALD1-213ENST00000462181 PRMT3O60678 531 aa10.56□□□□□ -0.72
CALD1-213ENST00000462181 ITGA6P23229 1130 aa10.56□□□□□ -0.72
CALD1-213ENST00000462181 MSX1P28360 303 aa10.56□□□□□ -0.72
CALD1-213ENST00000462181 WEE1P30291 646 aa10.56□□□□□ -0.72
CALD1-213ENST00000462181 SLC16A10Q8TF71 515 aa10.56□□□□□ -0.72
CALD1-213ENST00000462181 CLP1Q92989 425 aaKnown RBP10.56□□□□□ -0.72
CALD1-213ENST00000462181 GPAMQ9HCL2 828 aa10.56□□□□□ -0.72
CALD1-213ENST00000462181 TATP17735 454 aaPredicted RBP10.55□□□□□ -0.72
CALD1-213ENST00000462181 STAG2Q8N3U4 1231 aa10.55□□□□□ -0.72
CALD1-213ENST00000462181 C1orf216Q8TAB5 229 aa10.55□□□□□ -0.72
CALD1-213ENST00000462181 ZNF775Q96BV0 537 aaPredicted RBP10.55□□□□□ -0.72
CALD1-213ENST00000462181 TMEM88BA6NKF7 163 aa10.54□□□□□ -0.72
CALD1-213ENST00000462181 EML1O00423 815 aa10.54□□□□□ -0.72
CALD1-213ENST00000462181 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
CALD1-213ENST00000462181 VTI1AQ96AJ9 217 aa10.54□□□□□ -0.72
CALD1-213ENST00000462181 C2orf49Q9BVC5 232 aaPredicted RBP10.54□□□□□ -0.72
CALD1-213ENST00000462181 ZDHHC3Q9NYG2 299 aa10.54□□□□□ -0.72
CALD1-213ENST00000462181 HCN4Q9Y3Q4 1203 aa10.54□□□□□ -0.72
CALD1-213ENST00000462181 H7C1W4 665 aa10.53□□□□□ -0.72
CALD1-213ENST00000462181 FOXO3O43524 673 aa10.53□□□□□ -0.72
CALD1-213ENST00000462181 TXLNAP40222 546 aa10.53□□□□□ -0.72
CALD1-213ENST00000462181 SH3PXD2AQ5TCZ1 1133 aa10.53□□□□□ -0.72
CALD1-213ENST00000462181 CDC14CA4D256 554 aa10.52□□□□□ -0.73
CALD1-213ENST00000462181 H3BM21 787 aa10.52□□□□□ -0.73
CALD1-213ENST00000462181 PDE4CQ08493 712 aa10.52□□□□□ -0.73
CALD1-213ENST00000462181 ARSJQ5FYB0 599 aaPredicted RBP10.52□□□□□ -0.73
CALD1-213ENST00000462181 RETREG2Q8NC44 543 aa10.52□□□□□ -0.73
CALD1-213ENST00000462181 RUBCNLQ9H714 662 aa10.52□□□□□ -0.73
CALD1-213ENST00000462181 USTQ9Y2C2 406 aa10.52□□□□□ -0.73
CALD1-213ENST00000462181 CARNS1A5YM72 827 aa10.51□□□□□ -0.73
CALD1-213ENST00000462181 HIRAP54198 1017 aaPredicted RBP10.51□□□□□ -0.73
CALD1-213ENST00000462181 OCLNQ16625 522 aa10.51□□□□□ -0.73
CALD1-213ENST00000462181 POTEAQ6S8J7 498 aa10.51□□□□□ -0.73
CALD1-213ENST00000462181 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
CALD1-213ENST00000462181 TRIM22Q8IYM9 498 aa10.51□□□□□ -0.73
CALD1-213ENST00000462181 GMCL1Q96IK5 515 aa10.51□□□□□ -0.73
CALD1-213ENST00000462181 CUEDC1Q9NWM3 386 aaPredicted RBP10.51□□□□□ -0.73
CALD1-213ENST00000462181 ATP4AP20648 1035 aa10.5□□□□□ -0.73
CALD1-213ENST00000462181 ATP2B4P23634 1241 aa10.5□□□□□ -0.73
CALD1-213ENST00000462181 DBN1Q16643 649 aa10.5□□□□□ -0.73
CALD1-213ENST00000462181 VWA5B2Q8N398 1253 aa10.5□□□□□ -0.73
CALD1-213ENST00000462181 NGLY1Q96IV0 654 aa10.5□□□□□ -0.73
CALD1-213ENST00000462181 PHACTR1Q9C0D0 580 aa10.5□□□□□ -0.73
CALD1-213ENST00000462181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.5□□□□□ -0.73
CALD1-213ENST00000462181 CXXC1Q9P0U4 656 aaPredicted RBP10.5□□□□□ -0.73
CALD1-213ENST00000462181 FKBP5Q13451 457 aaPredicted RBP10.49□□□□□ -0.73
CALD1-213ENST00000462181 EFHC2Q5JST6 749 aa10.49□□□□□ -0.73
CALD1-213ENST00000462181 C1orf53Q5VUE5 145 aa10.49□□□□□ -0.73
CALD1-213ENST00000462181 SV2AQ7L0J3 742 aa10.49□□□□□ -0.73
CALD1-213ENST00000462181 ALDH16A1Q8IZ83 802 aa10.49□□□□□ -0.73
CALD1-213ENST00000462181 NANOS1Q8WY41 292 aaKnown RBP10.49□□□□□ -0.73
CALD1-213ENST00000462181 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
CALD1-213ENST00000462181 CRISPLD1Q9H336 500 aa10.49□□□□□ -0.73
CALD1-213ENST00000462181 WFS1O76024 890 aa10.48□□□□□ -0.73
CALD1-213ENST00000462181 NFX1Q12986 1120 aaKnown RBP10.48□□□□□ -0.73
CALD1-213ENST00000462181 RHPN1Q8TCX5 695 aa10.48□□□□□ -0.73
CALD1-213ENST00000462181 IRF7Q92985 503 aa10.48□□□□□ -0.73
CALD1-213ENST00000462181 NEUROD4Q9HD90 331 aa10.48□□□□□ -0.73
CALD1-213ENST00000462181 SLAIN2Q9P270 581 aa10.48□□□□□ -0.73
CALD1-213ENST00000462181 GJA3Q9Y6H8 435 aa10.48□□□□□ -0.73
CALD1-213ENST00000462181 A0A1W2PNR3 127 aa10.47□□□□□ -0.73
CALD1-213ENST00000462181 LBRQ14739 615 aaKnown RBP10.47□□□□□ -0.73
CALD1-213ENST00000462181 FOXR1Q6PIV2 292 aa10.47□□□□□ -0.73
CALD1-213ENST00000462181 ZIC5Q96T25 663 aa10.47□□□□□ -0.73
CALD1-213ENST00000462181 ZNF837Q96EG3 531 aaPredicted RBP10.46□□□□□ -0.73
CALD1-213ENST00000462181 TREML4Q6UXN2 200 aa10.45□□□□□ -0.74
CALD1-213ENST00000462181 MKNK1Q9BUB5 465 aa10.45□□□□□ -0.74
CALD1-213ENST00000462181 GPC6Q9Y625 555 aaPredicted RBP10.45□□□□□ -0.74
CALD1-213ENST00000462181 PTCD1O75127 700 aaKnown RBP10.44□□□□□ -0.74
CALD1-213ENST00000462181 SSFA2P28290 1259 aa10.44□□□□□ -0.74
CALD1-213ENST00000462181 NLRP8Q86W28 1048 aa10.44□□□□□ -0.74
CALD1-213ENST00000462181 GTPBP3Q969Y2 492 aaKnown RBP10.44□□□□□ -0.74
CALD1-213ENST00000462181 ERBB4Q15303 1308 aa10.43□□□□□ -0.74
CALD1-213ENST00000462181 VSIG8P0DPA2 414 aa10.43□□□□□ -0.74
CALD1-213ENST00000462181 RTN1Q16799 776 aa10.43□□□□□ -0.74
CALD1-213ENST00000462181 B4GALNT3Q6L9W6 998 aa10.43□□□□□ -0.74
CALD1-213ENST00000462181 FIGNL1Q6PIW4 674 aa10.43□□□□□ -0.74
CALD1-213ENST00000462181 C7orf43Q8WVR3 580 aa10.43□□□□□ -0.74
CALD1-213ENST00000462181 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
CALD1-213ENST00000462181 ANKIB1Q9P2G1 1089 aa10.43□□□□□ -0.74
CALD1-213ENST00000462181 LRRC69Q6ZNQ3 347 aa10.42□□□□□ -0.74
CALD1-213ENST00000462181 COL26A1Q96A83 441 aa10.42□□□□□ -0.74
CALD1-213ENST00000462181 ZCCHC2Q9C0B9 1178 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms